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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7URi | 26713 | 2023-04-19 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-04-19 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7V22 | 31634 | 2023-04-19 | 2021-08-07 | 3.38 | 3.61 | — | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.10 | 0.00 | 2.236 | 8.81 | 0.46 | 12.1 | 87.5 | 0.4 | -2.81 | 0.53 | 0.77 | 4.24 | 3.6 | 0.004 | 0.70 | 0.0 | 0.05 | 16.03 | 0.00 | 2.170 | 11.14 | 0.46 | 13.4 | 86.2 | 0.4 | -2.46 | 0.55 | 0.53 | 0.80 | 3.78 | 1958 | 240 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SRQ | 25401 | 2023-04-20 | 2021-11-08 | 2.7 | 2.17 | — | 1.9 | 0.008 | 0.80 | 0.0 | 0.05 | 13.54 | 0.01 | 2.296 | 8.67 | 1.50 | 2.8 | 97.2 | 0.0 | 0.29 | 0.70 | 0.72 | 4.55 | 2.7 | 0.004 | 0.76 | 0.0 | 0.04 | 15.44 | 0.00 | 2.264 | 8.93 | 3.50 | 3.2 | 96.8 | 0.0 | 0.20 | 0.48 | 0.72 | 0.77 | 3.78 | 1960 | 254 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7JZU | 22574 | 2023-04-19 | 2020-09-02 | 3.1 | 3.26 | 3.10 | 3.3 | 0.015 | 1.34 | 0.0 | 0.08 | 9.69 | 0.01 | 2.509 | 0.78 | 0.00 | 3.3 | 96.7 | 0.0 | 0.23 | 0.69 | 0.76 | 4.15 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 15.06 | 0.00 | 2.208 | 5.19 | 0.98 | 3.3 | 96.7 | 0.0 | 0.42 | 1.61 | 0.69 | 0.80 | 3.94 | 1987 | 248 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7WX4 | 32876 | 2023-04-19 | 2022-02-14 | 3.4 | 3.64 | 2.77 | 3.7 | 0.006 | 0.59 | 0.0 | 0.04 | 16.46 | 0.00 | 2.219 | 8.20 | 6.39 | 7.2 | 92.8 | 0.0 | -3.40 | 0.43 | 0.82 | 0.72 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 17.71 | 0.00 | 2.120 | 5.71 | 0.00 | 6.0 | 94.0 | 0.0 | -0.14 | 0.45 | 0.43 | 0.82 | 0.59 | 1992 | 260 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-04-19 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 7JZM | 22533 | 2023-04-19 | 2020-09-02 | 3.5 | 3.74 | 3.50 | 3.7 | 0.015 | 1.38 | 0.0 | 0.08 | 9.29 | 0.01 | 2.420 | 1.01 | 0.00 | 2.0 | 98.0 | 0.0 | 0.75 | 0.75 | 0.78 | 4.01 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 14.65 | 0.00 | 2.187 | 9.13 | 0.00 | 3.9 | 96.1 | 0.0 | 0.33 | 1.25 | 0.76 | 0.80 | 3.36 | 2033 | 258 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6ZS5 | 11388 | 2023-04-19 | 2020-07-15 | 3.5 | 4.02 | 3.66 | 3.8 | 0.008 | 1.09 | 1.0 | 0.07 | 13.95 | 0.01 | 2.202 | 4.52 | 0.00 | 4.7 | 95.3 | 0.0 | -2.98 | 0.67 | 0.80 | 2.81 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 15.47 | 0.00 | 2.220 | 9.30 | 1.86 | 3.6 | 96.4 | 0.0 | -1.97 | 2.35 | 0.67 | 0.80 | 2.50 | 2036 | 257 | 4 | 0 | 7 | 0 | 0 | logfile |
✔ | 6YJ5 | 10816 | 2023-04-19 | 2020-04-02 | 3.5 | 2.92 | 3.56 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 13.19 | 0.01 | 2.183 | 4.22 | 0.00 | 12.5 | 87.5 | 0.0 | -5.13 | 0.42 | 0.62 | 3.01 | 3.3 | 0.007 | 0.81 | 0.0 | 0.05 | 15.31 | 0.01 | 2.257 | 11.88 | 0.61 | 12.2 | 87.8 | 0.0 | -2.14 | 0.81 | 0.52 | 0.74 | 3.59 | 2061 | 306 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DM2 | 27524 | 2023-04-19 | 2022-07-08 | 2.91 | 3.71 | 2.85 | 3.6 | 0.007 | 1.02 | 0.0 | 0.07 | 12.99 | 0.01 | 2.362 | 4.12 | 0.44 | 2.5 | 97.5 | 0.0 | -0.51 | 0.57 | 0.66 | 2.14 | 3.6 | 0.003 | 0.70 | 0.0 | 0.05 | 16.70 | 0.00 | 2.278 | 8.96 | 1.78 | 5.0 | 95.0 | 0.0 | -0.88 | 1.72 | 0.61 | 0.74 | 3.47 | 2104 | 249 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7ZSD | 14930 | 2023-04-19 | 2022-05-06 | 3.29 | 3.62 | 3.56 | 3.6 | 0.003 | 0.60 | 0.0 | 0.05 | 14.29 | 0.00 | 2.226 | 9.82 | 0.00 | 7.0 | 93.0 | 0.0 | -0.09 | 0.38 | 0.74 | 2.01 | 3.6 | 0.003 | 0.66 | 0.0 | 0.05 | 14.79 | 0.00 | 2.257 | 12.46 | 0.90 | 7.0 | 93.0 | 0.0 | -0.57 | 0.39 | 0.39 | 0.78 | 1.13 | 2120 | 261 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UHB | 26511 | 2023-04-19 | 2022-03-26 | 3.0 | 3.17 | 2.97 | 3.2 | 0.011 | 1.36 | 3.0 | 0.12 | 9.92 | 0.00 | 2.562 | 5.08 | 1.42 | 3.0 | 96.6 | 0.4 | -0.52 | 0.52 | 0.54 | -0.09 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 16.83 | 0.00 | 2.223 | 8.94 | 2.84 | 3.0 | 97.0 | 0.0 | 0.69 | 2.47 | 0.69 | 0.83 | 3.49 | 2141 | 270 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7Y14 | 33556 | 2023-04-19 | 2022-06-06 | 3.2 | 3.29 | 3.09 | 3.3 | 0.004 | 0.66 | 1.0 | 0.04 | 13.60 | 0.01 | 2.312 | 8.75 | 0.00 | 4.2 | 95.8 | 0.0 | 2.46 | 0.51 | 0.76 | 2.28 | 3.3 | 0.003 | 0.57 | 1.0 | 0.04 | 15.29 | 0.00 | 2.300 | 9.21 | 0.87 | 4.6 | 95.4 | 0.0 | 3.17 | 1.20 | 0.50 | 0.78 | 2.07 | 2145 | 265 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7JV2 | 22491 | 2023-04-19 | 2020-08-20 | 3.5 | 3.49 | 3.41 | 3.7 | 0.015 | 1.39 | 0.0 | 0.08 | 11.43 | 0.01 | 2.587 | 0.00 | 1.32 | 3.6 | 96.4 | 0.0 | 0.82 | 0.69 | 0.74 | 3.48 | 3.7 | 0.004 | 0.72 | 0.0 | 0.04 | 14.90 | 0.00 | 2.223 | 14.03 | 0.44 | 5.5 | 94.5 | 0.0 | -0.83 | 1.27 | 0.71 | 0.77 | 3.76 | 2151 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XiZ | 33213 | 2023-04-19 | 2022-04-14 | 3.74 | 3.27 | 3.81 | 3.1 | 0.013 | 1.11 | 0.0 | 0.06 | 17.48 | 0.01 | 2.386 | 4.94 | 0.00 | 12.8 | 86.4 | 0.8 | -3.37 | 0.35 | 0.71 | 1.78 | 3.1 | 0.004 | 0.81 | 0.0 | 0.05 | 17.83 | 0.01 | 2.218 | 16.22 | 1.70 | 16.6 | 82.6 | 0.8 | -3.61 | 1.54 | 0.37 | 0.74 | 1.40 | 2161 | 267 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VV0 | 32133 | 2023-04-19 | 2021-11-04 | 3.5 | 3.69 | — | 3.7 | 0.010 | 1.49 | 1.0 | 0.09 | 14.09 | 0.01 | 2.007 | 11.04 | 2.93 | 4.5 | 95.5 | 0.0 | -3.44 | 0.65 | 0.80 | 1.76 | 3.7 | 0.002 | 0.59 | 0.0 | 0.04 | 15.22 | 0.00 | 2.238 | 6.31 | 0.84 | 3.0 | 97.0 | 0.0 | 2.30 | 1.26 | 0.64 | 0.80 | 1.65 | 2175 | 268 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VV4 | 32137 | 2023-04-19 | 2021-11-04 | 2.97 | 3.66 | — | 3.7 | 0.007 | 1.20 | 2.0 | 0.09 | 14.57 | 0.01 | 1.600 | 15.98 | 3.75 | 4.2 | 95.8 | 0.0 | -0.53 | 0.64 | 0.78 | 2.05 | 3.7 | 0.003 | 0.76 | 0.0 | 0.04 | 17.20 | 0.00 | 2.114 | 10.81 | 2.50 | 2.3 | 97.4 | 0.4 | 2.12 | 0.55 | 0.58 | 0.76 | 0.88 | 2181 | 269 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Y13 | 33555 | 2023-04-19 | 2022-06-06 | 3.1 | 3.20 | 3.10 | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 13.19 | 0.01 | 2.195 | 8.24 | 0.00 | 6.1 | 93.9 | 0.0 | 1.88 | 0.59 | 0.80 | 3.01 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 15.52 | 0.00 | 2.192 | 8.24 | 0.43 | 5.3 | 94.7 | 0.0 | 2.76 | 0.26 | 0.54 | 0.80 | 2.48 | 2199 | 264 | 1 | 0 | 7 | 2 | 0 | logfile |
✔ | 7B6E | 12053 | 2023-04-19 | 2020-12-07 | 4.5 | 2.79 | — | 5.1 | 0.005 | 1.03 | 0.0 | 0.05 | 15.04 | 0.01 | 2.129 | 36.05 | 0.00 | 10.9 | 89.1 | 0.0 | -3.88 | 0.62 | 0.66 | — | 2.4 | 0.004 | 0.99 | 0.0 | 0.05 | 14.87 | 0.00 | 2.111 | 27.61 | 0.00 | 11.3 | 88.7 | 0.0 | -1.65 | 0.83 | 0.61 | 0.67 | — | 2205 | 269 | 1 | 0 | 0 | 0 | 0 | logfile |