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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5M6S | 3451 | 2023-04-19 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.6 | 0.003 | 0.63 | 0.0 | 0.03 | 18.81 | 0.00 | 1.995 | 10.68 | 0.00 | 6.2 | 93.8 | 0.0 | 2.64 | 2.46 | 0.03 | 0.08 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 7RXH | 24731 | 2023-04-20 | 2021-08-23 | 2.3 | 3.07 | — | 2.8 | 0.009 | 1.40 | 0.0 | 0.05 | 19.48 | 0.00 | 2.211 | 13.92 | 0.56 | 2.7 | 97.1 | 0.2 | -0.87 | 0.63 | 0.78 | 3.25 | 2.8 | 0.004 | 0.49 | 0.0 | 0.04 | 15.67 | 0.00 | 2.016 | 13.47 | 1.30 | 3.7 | 96.3 | 0.0 | 2.12 | 1.67 | 0.60 | 0.91 | 4.20 | 5631 | 626 | 1 | 0 | 18 | 24 | 48 | logfile |
✔ | 7S5V | 24840 | 2023-04-21 | 2021-09-12 | 3.3 | 3.61 | — | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 15.45 | 0.01 | 2.093 | 5.38 | 4.27 | 5.1 | 94.9 | 0.0 | -4.70 | 0.72 | 0.85 | 2.01 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 15.79 | 0.00 | 1.904 | 7.82 | 0.34 | 4.5 | 95.5 | 0.0 | -0.42 | 0.39 | 0.69 | 0.85 | 1.66 | 10964 | 1397 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Mi3 | 23838 | 2023-04-21 | 2021-04-16 | 3.5 | 3.72 | 3.45 | 3.6 | 0.012 | 1.47 | 0.0 | 0.08 | 12.84 | 0.01 | 1.978 | 5.17 | 1.94 | 6.8 | 92.8 | 0.3 | -1.80 | 0.85 | 0.86 | 3.53 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 14.87 | 0.00 | 1.987 | 10.40 | 0.55 | 4.0 | 96.0 | 0.0 | 0.70 | 2.29 | 0.85 | 0.87 | 2.77 | 9682 | 1192 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8E4Y | 27898 | 2023-04-20 | 2022-08-19 | 3.4 | 3.42 | 3.37 | 3.5 | 0.016 | 1.86 | 0.0 | 0.09 | 15.22 | 0.01 | 2.412 | 0.75 | 0.00 | 3.8 | 96.2 | 0.0 | -2.41 | 0.56 | 0.75 | 2.88 | 3.5 | 0.003 | 0.50 | 0.0 | 0.04 | 16.51 | 0.00 | 2.204 | 4.03 | 0.00 | 2.5 | 97.5 | 0.0 | 1.32 | 1.32 | 0.69 | 0.88 | 2.47 | 5294 | 651 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-04-19 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✘ | 7P06 | 13145 | 2023-04-25 | 2021-06-29 | 3.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21476 | 1350 | 1 | 0 | 3 | 0 | 10638 | logfile |
✔ | 7Mi8 | 23842 | 2023-04-23 | 2021-04-16 | 3.7 | 4.01 | 3.56 | 3.8 | 0.006 | 0.97 | 0.0 | 0.05 | 14.13 | 0.01 | 2.226 | 5.27 | 0.38 | 2.4 | 97.4 | 0.1 | -3.11 | 0.79 | 0.84 | 2.27 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 16.37 | 0.00 | 2.192 | 9.90 | 0.51 | 3.4 | 96.6 | 0.0 | 1.04 | 0.64 | 0.81 | 0.85 | 1.82 | 7034 | 868 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UVK | 26812 | 2023-04-21 | 2022-05-02 | 3.28 | 3.22 | 3.00 | 3.3 | 0.005 | 0.74 | 0.0 | 0.05 | 13.60 | 0.00 | 2.168 | 11.01 | 0.00 | 9.0 | 91.0 | 0.0 | -3.16 | 0.57 | 0.78 | 2.35 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 16.31 | 0.00 | 2.075 | 11.69 | 0.61 | 9.4 | 90.6 | 0.0 | -2.27 | 1.11 | 0.71 | 0.87 | 2.85 | 10350 | 1295 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z1H | 14446 | 2023-04-23 | 2022-02-24 | 3.12 | 4.01 | — | 3.5 | 0.016 | 0.97 | 2.0 | 0.04 | 12.32 | 0.00 | 1.830 | 20.25 | 0.18 | 10.8 | 88.7 | 0.5 | -1.31 | 0.79 | 0.79 | 1.28 | 3.5 | 0.016 | 0.94 | 2.0 | 0.04 | 14.23 | 0.00 | 1.692 | 20.59 | 0.00 | 11.7 | 87.9 | 0.4 | -1.08 | 0.41 | 0.79 | 0.77 | 1.28 | 15032 | 1848 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 5A7U | 3079 | 2023-04-19 | 2015-07-10 | 4.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 455 | 27 | 1 | 0 | 1 | 0 | 231 | logfile |
✔ | 7B54 | 12018 | 2023-04-23 | 2020-12-03 | 3.1 | 3.96 | — | 3.6 | 0.005 | 0.77 | 0.0 | 0.04 | 14.53 | 0.00 | 2.081 | 15.09 | 0.19 | 12.5 | 87.1 | 0.4 | -1.25 | 0.82 | 0.83 | 1.99 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 15.78 | 0.00 | 2.106 | 13.07 | 0.19 | 11.9 | 87.7 | 0.4 | -0.71 | 0.32 | 0.81 | 0.82 | 1.57 | 14148 | 1732 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oJJ | 12953 | 2023-04-23 | 2021-05-16 | 3.5 | 4.03 | 3.58 | 3.5 | 0.006 | 0.66 | 2.0 | 0.06 | 13.63 | 0.00 | 2.009 | 9.47 | 0.12 | 11.4 | 88.6 | 0.0 | -3.69 | 0.92 | 0.87 | 2.01 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 14.79 | 0.00 | 2.000 | 8.25 | 0.06 | 7.7 | 92.3 | 0.0 | -0.47 | 0.98 | 0.92 | 0.88 | 1.67 | 14330 | 1785 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7B6E | 12053 | 2023-04-19 | 2020-12-07 | 4.5 | 2.79 | — | 5.1 | 0.005 | 1.03 | 0.0 | 0.05 | 15.04 | 0.01 | 2.129 | 36.05 | 0.00 | 10.9 | 89.1 | 0.0 | -3.88 | 0.62 | 0.66 | — | 2.4 | 0.004 | 0.99 | 0.0 | 0.05 | 14.87 | 0.00 | 2.111 | 27.61 | 0.00 | 11.3 | 88.7 | 0.0 | -1.65 | 0.83 | 0.61 | 0.67 | — | 2205 | 269 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2023-04-19 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7Mi6 | 23841 | 2023-04-29 | 2021-04-16 | 3.9 | 4.23 | 3.91 | 4.0 | 0.012 | 1.49 | 3.0 | 0.08 | 13.51 | 0.01 | 2.027 | 6.46 | 1.32 | 5.3 | 94.3 | 0.4 | -2.30 | 0.84 | 0.82 | 1.35 | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 16.29 | 0.00 | 1.991 | 14.50 | 0.14 | 3.1 | 96.8 | 0.0 | 0.58 | 1.19 | 0.85 | 0.83 | 1.41 | 19653 | 2419 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7NXF | 12638 | 2023-04-20 | 2021-03-18 | 3.1 | 4.01 | 3.17 | 3.6 | 0.006 | 0.82 | 0.0 | 0.04 | 14.20 | 0.01 | 2.281 | 9.15 | 0.00 | 7.9 | 92.1 | 0.0 | -0.71 | 0.60 | 0.80 | 1.58 | 3.7 | 0.005 | 0.67 | 0.0 | 0.04 | 15.64 | 0.00 | 1.905 | 9.22 | 0.44 | 7.3 | 92.7 | 0.0 | 0.44 | 1.96 | 0.59 | 0.86 | 1.35 | 6405 | 829 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 6C0V | 7325 | 2023-04-21 | 2018-01-02 | 3.4 | 3.67 | — | 3.9 | 0.008 | 1.14 | 0.0 | 0.06 | 12.84 | 0.00 | 1.961 | 0.33 | 0.00 | 4.3 | 95.7 | 0.0 | -2.20 | 0.42 | 0.67 | 2.82 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 16.30 | 0.00 | 1.939 | 7.86 | 0.96 | 2.8 | 97.2 | 0.0 | 1.00 | 1.45 | 0.58 | 0.86 | 2.33 | 8976 | 1154 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8E2G | 27835 | 2023-04-20 | 2022-08-15 | 2.99 | 3.17 | 3.03 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 15.68 | 0.00 | 1.928 | 12.10 | 2.42 | 6.4 | 93.6 | 0.0 | -1.77 | 0.46 | 0.74 | 2.37 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 15.95 | 0.00 | 1.938 | 11.98 | 2.86 | 7.6 | 92.4 | 0.0 | -1.67 | 1.00 | 0.46 | 0.74 | 2.07 | 8110 | 523 | 1 | 0 | 0 | 0 | 4078 | logfile |
✔ | 7BC5 | 12139 | 2023-04-19 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.04 | 0.00 | 2.243 | 14.42 | 0.76 | 7.5 | 92.5 | 0.0 | -2.75 | 1.30 | 0.23 | 0.58 | 0.92 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |