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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PD4 | 13330 | 2023-11-14 | 2021-08-04 | 4.9 | 4.13 | — | 7.8 | 0.005 | 0.87 | 0.0 | 0.05 | 14.59 | 0.00 | 2.035 | 38.59 | 0.00 | 11.7 | 88.3 | 0.0 | -4.80 | 0.73 | 0.72 | — | 7.8 | 0.003 | 0.78 | 0.0 | 0.04 | 13.56 | 0.00 | 2.126 | 18.85 | 0.00 | 5.8 | 94.2 | 0.0 | -0.39 | 1.28 | 0.73 | 0.73 | — | 6676 | 842 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Si3 | 25137 | 2023-11-15 | 2021-10-12 | 3.19 | 3.21 | — | 3.2 | 0.003 | 1.19 | 0.0 | 0.04 | 13.00 | 0.00 | 2.038 | 2.15 | 0.00 | 1.5 | 98.5 | 0.0 | 3.72 | 0.48 | 0.77 | 1.74 | 3.1 | 0.003 | 0.85 | 0.0 | 0.04 | 14.48 | 0.00 | 1.919 | 4.15 | 0.00 | 2.7 | 97.3 | 0.0 | 2.05 | 0.93 | 0.51 | 0.82 | 2.32 | 13500 | 873 | 1 | 0 | 2 | 0 | 6901 | logfile |
✔ | 7SYF | 25524 | 2023-11-15 | 2021-11-24 | 4.2 | 3.03 | 3.92 | 2.2 | 0.013 | 1.86 | 8.0 | 0.10 | 14.32 | 0.01 | 2.460 | 1.62 | 1.31 | 3.9 | 96.1 | 0.0 | -1.56 | 0.67 | 0.61 | — | 2.2 | 0.003 | 0.78 | 0.0 | 0.04 | 13.94 | 0.00 | 1.993 | 16.84 | 0.08 | 3.1 | 96.9 | 0.0 | 0.80 | 1.17 | 0.68 | 0.63 | — | 11108 | 1391 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YiM | 33861 | 2023-11-13 | 2022-07-17 | 2.6 | 2.93 | 2.77 | 2.9 | 0.013 | 1.14 | 0.0 | 0.07 | 15.89 | 0.01 | 2.272 | 6.72 | 0.78 | 4.9 | 95.1 | 0.0 | -4.17 | 0.67 | 0.68 | 1.25 | 2.9 | 0.003 | 0.64 | 0.0 | 0.04 | 17.74 | 0.00 | 2.221 | 10.52 | 2.52 | 3.4 | 96.6 | 0.0 | 0.68 | 1.25 | 0.64 | 0.66 | 1.25 | 4657 | 592 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2023-11-13 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 21.28 | 0.01 | 1.783 | 38.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 7EZ0 | 31385 | 2023-11-14 | 2021-06-01 | 3.14 | 3.26 | — | 3.2 | 0.003 | 0.56 | 0.0 | 0.03 | 14.43 | 0.00 | 1.804 | 2.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.74 | 0.79 | — | 3.2 | 0.006 | 0.68 | 0.0 | 0.04 | 15.56 | 0.00 | 1.860 | 8.26 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.91 | 0.76 | 0.85 | — | 8306 | 0 | 1 | 387 | 27 | 0 | 0 | logfile |
✔ | 7K1V | 22630 | 2023-11-13 | 2020-09-08 | 4.6 | 4.95 | — | 4.8 | 0.008 | 1.12 | 0.0 | 0.06 | 15.77 | 0.01 | 2.159 | 13.77 | 0.40 | 11.0 | 89.0 | 0.0 | -4.04 | 0.71 | 0.71 | — | 4.8 | 0.003 | 0.72 | 0.0 | 0.04 | 13.84 | 0.00 | 2.160 | 21.48 | 0.00 | 7.3 | 92.7 | 0.0 | -1.21 | 2.35 | 0.70 | 0.75 | — | 4971 | 626 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LLE | 0912 | 2023-11-14 | 2019-12-23 | 2.9 | 3.06 | 2.85 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 12.59 | 0.00 | 2.050 | 6.54 | 0.00 | 2.7 | 97.3 | 0.0 | -1.87 | 0.67 | 0.82 | 3.28 | 3.0 | 0.002 | 0.56 | 0.0 | 0.04 | 16.67 | 0.00 | 2.092 | 7.67 | 1.95 | 2.1 | 97.9 | 0.0 | 0.63 | 0.45 | 0.68 | 0.84 | 2.79 | 7916 | 1020 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8DEP | 27394 | 2023-11-13 | 2022-06-21 | 3.6 | 4.01 | 3.65 | 3.8 | 0.008 | 0.76 | 0.0 | 0.07 | 13.59 | 0.01 | 2.197 | 5.44 | 0.65 | 0.5 | 99.5 | 0.0 | 3.03 | 0.47 | 0.78 | 1.93 | 3.9 | 0.003 | 0.62 | 0.0 | 0.03 | 16.80 | 0.00 | 2.214 | 7.84 | 0.32 | 1.5 | 98.5 | 0.0 | 2.16 | 0.65 | 0.46 | 0.77 | 1.68 | 3223 | 398 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WBU | 32406 | 2023-11-16 | 2021-12-17 | 3.42 | 3.70 | — | 3.6 | 0.003 | 0.59 | 1.0 | 0.04 | 15.37 | 0.01 | 2.145 | 7.00 | 0.37 | 2.2 | 97.8 | 0.0 | 0.89 | 0.67 | 0.73 | 1.75 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 17.09 | 0.00 | 2.215 | 9.24 | 0.24 | 2.7 | 97.3 | 0.0 | 0.75 | 0.48 | 0.69 | 0.79 | 1.88 | 7170 | 898 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 5YWD | 6853 | 2023-11-14 | 2017-11-29 | 4.2 | 4.38 | 4.11 | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 14.12 | 0.00 | 2.031 | 12.08 | 6.20 | 4.1 | 95.9 | 0.0 | -1.54 | 0.62 | 0.74 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 13.58 | 0.00 | 1.928 | 14.00 | 0.00 | 4.0 | 96.0 | 0.0 | 1.14 | 1.51 | 0.65 | 0.77 | — | 8997 | 1154 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7K11 | 22620 | 2023-11-14 | 2020-09-06 | 3.21 | 3.34 | — | 3.3 | 0.005 | 0.92 | 0.0 | 0.05 | 15.33 | 0.01 | 2.271 | 4.65 | 0.46 | 9.6 | 90.3 | 0.1 | -5.00 | 0.69 | 0.76 | 1.74 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 16.63 | 0.00 | 2.259 | 7.50 | 0.37 | 9.4 | 90.6 | 0.0 | -0.83 | 1.23 | 0.70 | 0.78 | 1.30 | 10011 | 1254 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5oJS | 3824 | 2023-11-19 | 2017-07-24 | 3.7 | 3.84 | — | 3.7 | 0.007 | 1.43 | 0.0 | 0.07 | 13.41 | 0.01 | 2.211 | 8.29 | 2.09 | 14.8 | 84.6 | 0.6 | -5.58 | 0.80 | 0.75 | 1.62 | 3.7 | 0.003 | 0.91 | 0.0 | 0.05 | 16.05 | 0.01 | 2.122 | 16.03 | 0.38 | 13.5 | 86.3 | 0.2 | -1.93 | 0.80 | 0.80 | 0.74 | 0.88 | 28407 | 3473 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2023-11-13 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZH6 | 14725 | 2023-11-13 | 2022-04-05 | 3.67 | 4.10 | 0.95 | 4.2 | 0.006 | 0.90 | 0.0 | 0.06 | 16.13 | 0.01 | 1.607 | 26.36 | 1.26 | 6.4 | 93.6 | 0.0 | 0.99 | 0.54 | 0.73 | 1.36 | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 16.88 | 0.00 | 2.217 | 14.09 | 0.00 | 6.0 | 94.0 | 0.0 | 0.95 | 1.12 | 0.54 | 0.74 | 1.24 | 3771 | 478 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Si7 | 25139 | 2023-11-15 | 2021-10-12 | 3.49 | 3.47 | — | 3.4 | 0.003 | 1.32 | 0.0 | 0.04 | 13.13 | 0.00 | 1.963 | 5.23 | 0.00 | 2.6 | 97.4 | 0.0 | 2.38 | 0.49 | 0.78 | 0.67 | 3.4 | 0.002 | 0.92 | 0.0 | 0.04 | 15.00 | 0.00 | 1.950 | 5.49 | 0.17 | 3.1 | 96.9 | 0.0 | 2.10 | 0.51 | 0.51 | 0.83 | 0.96 | 11287 | 728 | 1 | 0 | 2 | 0 | 5777 | logfile |
✔ | 6XJB | 22205 | 2023-11-15 | 2020-06-23 | 3.8 | 4.06 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 13.11 | 0.00 | 2.165 | 9.70 | 0.00 | 8.6 | 91.4 | 0.0 | -3.06 | 0.88 | 0.82 | 1.76 | 3.9 | 0.004 | 0.64 | 0.0 | 0.04 | 15.19 | 0.00 | 2.043 | 13.87 | 0.19 | 7.8 | 92.2 | 0.0 | -1.33 | 1.82 | 0.88 | 0.85 | 2.02 | 10070 | 1277 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Si6 | 25138 | 2023-11-15 | 2021-10-12 | 3.32 | 3.28 | — | 3.3 | 0.003 | 1.22 | 0.0 | 0.04 | 13.58 | 0.00 | 2.044 | 4.51 | 0.00 | 1.4 | 98.6 | 0.0 | 2.88 | 0.46 | 0.77 | 1.67 | 3.3 | 0.003 | 0.85 | 0.0 | 0.04 | 14.76 | 0.00 | 1.919 | 4.22 | 0.41 | 1.7 | 98.3 | 0.0 | 2.52 | 0.39 | 0.52 | 0.82 | 1.82 | 13515 | 873 | 1 | 0 | 2 | 0 | 6910 | logfile |
✘ | 7FiL | 31602 | 2023-11-13 | 2021-07-31 | 3.0 | 2.84 | — | 3.6 | 0.008 | 1.05 | 2.0 | 0.06 | 18.46 | 0.01 | 2.213 | 19.35 | 8.76 | 7.7 | 91.1 | 1.2 | -1.82 | 0.71 | 0.75 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3993 | 504 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TX6 | 26155 | 2023-11-13 | 2022-02-07 | 3.3 | 3.60 | 3.29 | 3.5 | 0.008 | 0.90 | 1.0 | 0.05 | 12.44 | 0.01 | 2.327 | 6.69 | 0.62 | 3.0 | 97.0 | 0.0 | 2.51 | 0.53 | 0.76 | 2.79 | 3.6 | 0.003 | 0.71 | 1.0 | 0.05 | 15.51 | 0.01 | 2.189 | 6.37 | 0.00 | 3.3 | 96.7 | 0.0 | 1.64 | 1.61 | 0.53 | 0.77 | 2.32 | 3169 | 398 | 1 | 0 | 2 | 0 | 0 | logfile |