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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5UJA | 8560 | 2022-12-12 | 2017-01-17 | 3.34 | 3.41 | 3.88 | 3.4 | 0.008 | 1.31 | 1.0 | 0.06 | 13.61 | 0.00 | 2.321 | 0.92 | 0.00 | 4.0 | 96.0 | 0.0 | -3.39 | 0.49 | 0.66 | 2.49 | 3.3 | 0.003 | 0.75 | 0.0 | 0.04 | 16.37 | 0.00 | 2.195 | 12.39 | 0.39 | 4.5 | 95.5 | 0.0 | 0.09 | 1.06 | 0.57 | 0.79 | 1.69 | 9900 | 1170 | 1 | 0 | 126 | 0 | 0 | logfile |
✔ | 6JXC | 9893 | 2022-12-13 | 2019-04-23 | 4.1 | 4.20 | — | 4.1 | 0.018 | 1.71 | 0.0 | 0.09 | 8.99 | 0.01 | 2.221 | 4.88 | 0.38 | 9.3 | 87.7 | 3.0 | -1.28 | 0.50 | 0.61 | — | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 12.09 | 0.00 | 2.114 | 9.49 | 0.00 | 11.6 | 86.5 | 1.9 | 0.33 | 0.96 | 0.55 | 0.69 | — | 15270 | 2345 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5W81 | 8782 | 2022-12-12 | 2017-06-21 | 3.37 | 3.79 | — | 3.9 | 0.008 | 1.26 | 1.0 | 0.06 | 13.30 | 0.00 | 1.940 | 1.47 | 0.00 | 5.1 | 94.9 | 0.0 | -3.11 | 0.45 | 0.60 | 0.57 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 16.92 | 0.00 | 1.895 | 8.05 | 0.30 | 3.2 | 96.7 | 0.1 | 0.15 | 1.56 | 0.57 | 0.82 | 1.39 | 9393 | 1173 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6X13 | 21987 | 2022-12-11 | 2020-05-18 | 3.66 | 3.77 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 16.27 | 0.01 | 2.340 | 4.80 | 0.31 | 6.5 | 93.5 | 0.0 | -3.73 | 0.64 | 0.84 | 1.86 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 15.85 | 0.00 | 2.290 | 10.07 | 0.00 | 5.1 | 94.9 | 0.0 | 1.68 | 0.43 | 0.64 | 0.83 | 1.50 | 3136 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6KLC | 0706 | 2022-12-12 | 2019-07-30 | 3.9 | 3.97 | — | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 13.24 | 0.00 | 2.198 | 11.06 | 0.64 | 9.3 | 90.5 | 0.2 | -3.27 | 0.73 | 0.77 | 1.53 | 3.9 | 0.004 | 0.81 | 0.0 | 0.05 | 16.14 | 0.00 | 2.094 | 13.94 | 0.56 | 10.2 | 89.8 | 0.1 | -0.58 | 1.54 | 0.74 | 0.78 | 1.11 | 11210 | 1436 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7BWM | 30233 | 2022-12-14 | 2020-04-15 | 2.9 | 2.97 | — | 2.9 | 0.005 | 0.78 | 0.0 | 0.05 | 14.21 | 0.00 | 2.048 | 7.48 | 7.21 | 5.8 | 94.0 | 0.3 | -3.28 | 0.76 | 0.85 | 4.49 | 2.9 | 0.003 | 0.62 | 0.0 | 0.04 | 15.48 | 0.00 | 2.141 | 7.42 | 2.14 | 5.0 | 94.9 | 0.1 | -0.84 | 1.13 | 0.79 | 0.87 | 3.50 | 9532 | 1219 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2022-12-11 | 2018-02-26 | 3.2 | 4.43 | 2.97 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.003 | 0.82 | 0.0 | 0.04 | 14.91 | 0.00 | 2.261 | 15.40 | 0.00 | 10.0 | 88.8 | 1.2 | -1.84 | 3.11 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 6N9Y | 0383 | 2022-12-11 | 2018-12-04 | 4.0 | 3.80 | — | 3.7 | 0.008 | 1.10 | 0.0 | 0.05 | 10.30 | 0.01 | 2.229 | 5.13 | 0.42 | 9.1 | 90.9 | 0.0 | -4.98 | 0.38 | 0.73 | — | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 15.57 | 0.00 | 2.155 | 14.28 | 0.00 | 8.9 | 91.1 | 0.0 | -1.04 | 1.76 | 0.40 | 0.78 | — | 4527 | 552 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XLY | 22252 | 2022-12-11 | 2020-06-29 | 3.1 | 4.00 | 3.11 | 3.5 | 0.006 | 0.95 | 0.0 | 0.05 | 15.47 | 0.01 | 2.336 | 4.00 | 0.97 | 4.3 | 95.7 | 0.0 | -5.77 | 0.86 | 0.77 | 1.71 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 15.59 | 0.00 | 2.157 | 11.49 | 0.00 | 3.0 | 97.0 | 0.0 | 0.53 | 0.56 | 0.88 | 0.84 | 1.47 | 5111 | 646 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7K1V | 22630 | 2022-12-11 | 2020-09-08 | 4.6 | 4.95 | — | 4.8 | 0.008 | 1.12 | 0.0 | 0.06 | 15.77 | 0.01 | 2.159 | 13.77 | 0.40 | 11.0 | 89.0 | 0.0 | -4.04 | 0.71 | 0.71 | — | 4.8 | 0.003 | 0.72 | 0.0 | 0.04 | 13.85 | 0.00 | 2.080 | 20.14 | 0.00 | 6.3 | 93.7 | 0.0 | -1.06 | 2.36 | 0.70 | 0.75 | — | 4971 | 626 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6LQA | 0942 | 2022-12-18 | 2020-01-13 | 3.3 | 3.51 | — | 3.5 | 0.008 | 1.28 | 0.0 | 0.07 | 14.15 | 0.01 | 1.369 | 15.42 | 6.02 | 7.8 | 91.4 | 0.9 | -4.09 | 0.56 | 0.77 | 2.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9387 | 1151 | 1 | 0 | 10 | 0 | 0 | logfile |
✔ | 7DTC | 30850 | 2022-12-12 | 2021-01-04 | 3.3 | 3.73 | — | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 14.07 | 0.00 | 2.201 | 12.28 | 0.49 | 7.9 | 91.6 | 0.4 | -3.34 | 0.52 | 0.80 | 1.81 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 16.08 | 0.00 | 2.219 | 10.80 | 0.39 | 7.9 | 92.1 | 0.1 | 0.31 | 1.35 | 0.54 | 0.82 | 1.46 | 9363 | 1151 | 1 | 0 | 9 | 0 | 0 | logfile |
✔ | 6D3R | 7793 | 2022-12-11 | 2018-04-16 | 4.3 | 4.80 | 4.40 | 4.5 | 0.017 | 1.75 | 0.0 | 0.10 | 9.07 | 0.01 | 2.385 | 0.71 | 0.00 | 1.5 | 98.5 | 0.0 | 0.66 | 0.66 | 0.76 | — | 4.6 | 0.003 | 0.63 | 0.0 | 0.04 | 11.99 | 0.00 | 2.245 | 7.92 | 0.00 | 2.6 | 97.4 | 0.0 | 1.98 | 1.20 | 0.67 | 0.77 | — | 7610 | 1127 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7KTT | 23029 | 2022-12-11 | 2020-11-24 | 4.17 | 4.46 | — | 4.2 | 0.007 | 1.04 | 0.0 | 0.06 | 13.23 | 0.01 | 2.239 | 12.66 | 0.25 | 5.7 | 94.3 | 0.0 | -5.41 | 0.81 | 0.78 | — | 4.2 | 0.005 | 0.80 | 0.0 | 0.05 | 13.89 | 0.00 | 2.090 | 25.26 | 0.00 | 4.9 | 95.1 | 0.0 | -0.30 | 0.68 | 0.81 | 0.77 | — | 7568 | 994 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2022-12-11 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 17.65 | 0.00 | 2.262 | 7.24 | 1.97 | 1.7 | 98.3 | 0.0 | 1.01 | 1.32 | 0.21 | 0.80 | 3.18 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2022-12-11 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.87 | 0.0 | 0.04 | 21.10 | 0.01 | 1.792 | 36.17 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 6UWF | 20922 | 2022-12-11 | 2019-11-05 | 3.08 | 3.26 | — | 3.3 | 0.008 | 1.08 | 0.0 | 0.05 | 16.40 | 0.01 | 2.294 | 2.14 | 0.00 | 3.1 | 96.9 | 0.0 | -3.86 | 0.70 | 0.85 | 2.48 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.19 | 0.00 | 2.243 | 6.27 | 0.92 | 3.1 | 96.9 | 0.0 | 0.94 | 0.31 | 0.67 | 0.85 | 2.48 | 3178 | 417 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6JNC | 9847 | 2022-12-11 | 2019-03-14 | 3.7 | 3.76 | — | 3.8 | 0.009 | 0.87 | 0.0 | 0.05 | 14.72 | 0.01 | 2.304 | 3.48 | 9.09 | 4.8 | 95.2 | 0.0 | -5.69 | 0.46 | 0.78 | 1.61 | 3.8 | 0.005 | 0.61 | 0.0 | 0.05 | 15.66 | 0.00 | 2.291 | 5.00 | 0.00 | 4.6 | 95.4 | 0.0 | -1.11 | 1.56 | 0.52 | 0.89 | 2.22 | 3294 | 419 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7NUR | 12600 | 2022-12-12 | 2021-03-13 | 3.125 | 3.29 | — | 3.3 | 0.007 | 0.77 | 0.0 | 0.05 | 14.31 | 0.01 | 2.174 | 5.26 | 0.11 | 7.7 | 92.0 | 0.3 | -4.11 | 0.77 | 0.87 | 3.09 | 3.3 | 0.004 | 0.65 | 0.0 | 0.04 | 15.97 | 0.00 | 2.226 | 4.65 | 0.57 | 6.4 | 93.5 | 0.1 | -0.35 | 1.29 | 0.74 | 0.87 | 2.31 | 8245 | 1044 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ASK | 11895 | 2022-12-12 | 2020-10-27 | 4.3 | 4.39 | — | 4.3 | 0.028 | 2.98 | 47.0 | 0.22 | 18.83 | 0.02 | 0.766 | 14.33 | 2.58 | 16.8 | 73.5 | 9.7 | -6.06 | 0.17 | 0.51 | — | 4.3 | 0.021 | 1.32 | 2.0 | 0.05 | 15.46 | 0.01 | 2.042 | 17.93 | 0.00 | 18.5 | 80.0 | 1.5 | -3.37 | 1.32 | 0.19 | 0.60 | — | 12285 | 1523 | 1 | 0 | 2 | 0 | 0 | logfile |