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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6UET | 20756 | 2022-05-12 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.58 | 0.0 | 0.07 | 17.24 | 0.02 | 1.977 | 4.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.97 | 0.0 | 0.05 | 22.75 | 0.01 | 1.773 | 50.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.77 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 5LY6 | 4118 | 2022-05-12 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.004 | 0.81 | 0.0 | 0.04 | 13.96 | 0.00 | 2.167 | 15.68 | 0.24 | 10.2 | 89.3 | 0.4 | -2.62 | 3.61 | 0.40 | 0.77 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5YWD | 6853 | 2022-05-13 | 2017-11-29 | 4.2 | 4.38 | 4.11 | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 14.12 | 0.00 | 2.031 | 12.08 | 6.20 | 4.1 | 95.9 | 0.0 | -1.54 | 0.62 | 0.74 | — | 4.2 | 0.003 | 0.77 | 0.0 | 0.04 | 13.42 | 0.00 | 1.924 | 14.05 | 0.00 | 3.8 | 96.2 | 0.0 | 1.24 | 1.51 | 0.65 | 0.77 | — | 8997 | 1154 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6L42 | 0828 | 2022-05-13 | 2019-10-15 | 3.4 | 3.83 | — | 3.8 | 0.006 | 2.50 | 84.0 | 0.16 | 15.34 | 0.01 | 1.354 | 33.14 | 2.82 | 10.0 | 89.4 | 0.7 | -5.07 | 0.80 | 0.77 | 1.31 | 3.7 | 0.004 | 0.90 | 0.0 | 0.05 | 16.54 | 0.01 | 2.098 | 14.55 | 0.43 | 11.7 | 88.2 | 0.1 | -2.53 | 0.82 | 0.82 | 0.82 | 1.18 | 14797 | 1858 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6DMo | 7964 | 2022-05-12 | 2018-06-05 | 4.1 | 4.16 | — | 4.1 | 0.008 | 1.26 | 0.0 | 0.06 | 13.66 | 0.01 | 1.764 | 8.97 | 2.78 | 11.1 | 88.6 | 0.3 | -4.11 | 0.55 | 0.64 | — | 4.1 | 0.004 | 0.87 | 0.0 | 0.05 | 13.51 | 0.00 | 2.132 | 16.15 | 0.00 | 10.5 | 89.5 | 0.0 | -0.53 | 1.27 | 0.59 | 0.72 | — | 7853 | 982 | 1 | 0 | 7 | 0 | 0 | logfile |
✔ | 6HYD | 0308 | 2022-05-13 | 2018-10-19 | 3.9 | 4.01 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.05 | 9.33 | 0.01 | 2.319 | 2.63 | 0.24 | 5.7 | 94.0 | 0.3 | -6.69 | 0.74 | 0.77 | 2.59 | 4.0 | 0.003 | 0.69 | 0.0 | 0.04 | 14.49 | 0.00 | 2.163 | 5.59 | 0.24 | 5.8 | 94.0 | 0.2 | -1.37 | 1.74 | 0.77 | 0.80 | 1.55 | 12168 | 1543 | 1 | 0 | 31 | 0 | 0 | logfile |
✘ | 6JND | 9848 | 2022-05-12 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 0.82 | 0.0 | 0.05 | 15.64 | 0.01 | 2.316 | 4.09 | 11.73 | 5.8 | 94.2 | 0.0 | -5.73 | 0.43 | 0.77 | 1.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3294 | 419 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 5V7V | 8642 | 2022-05-13 | 2017-03-20 | 3.9 | 3.88 | — | 3.8 | 0.011 | 1.19 | 1.0 | 0.06 | 12.64 | 0.01 | 1.713 | 18.52 | 0.00 | 11.2 | 88.7 | 0.2 | -4.92 | 0.55 | 0.69 | 1.61 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 15.80 | 0.00 | 1.965 | 15.13 | 0.57 | 9.4 | 90.6 | 0.0 | -1.01 | 1.02 | 0.61 | 0.78 | 0.54 | 9919 | 613 | 1 | 0 | 9 | 0 | 4811 | logfile |
✔ | 5YW7 | 6847 | 2022-05-12 | 2017-11-29 | 4.4 | 4.45 | 4.13 | 4.3 | 0.004 | 0.71 | 1.0 | 0.05 | 13.01 | 0.01 | 2.246 | 14.02 | 6.49 | 4.3 | 95.7 | 0.0 | -2.58 | 0.70 | 0.79 | — | 4.3 | 0.003 | 0.70 | 0.0 | 0.04 | 13.00 | 0.00 | 2.220 | 12.04 | 0.00 | 3.0 | 97.0 | 0.0 | 0.73 | 1.83 | 0.71 | 0.80 | — | 8944 | 1140 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 6L53 | 0836 | 2022-05-13 | 2019-10-22 | 3.63 | 3.79 | — | 3.7 | 0.002 | 0.67 | 0.0 | 0.04 | 9.71 | 0.00 | 2.193 | 8.74 | 3.49 | 9.8 | 89.9 | 0.3 | -4.90 | 0.77 | 0.70 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13991 | 1935 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DMB | 7963 | 2022-05-12 | 2018-06-04 | 3.9 | 4.13 | — | 4.0 | 0.009 | 1.35 | 0.0 | 0.07 | 13.32 | 0.01 | 2.266 | 6.34 | 1.94 | 13.2 | 86.2 | 0.6 | -4.55 | 0.61 | 0.78 | 2.39 | 4.0 | 0.005 | 0.88 | 0.0 | 0.05 | 15.88 | 0.01 | 2.132 | 13.63 | 1.46 | 13.6 | 86.4 | 0.0 | -0.90 | 1.80 | 0.63 | 0.79 | 0.87 | 7945 | 990 | 1 | 0 | 9 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2022-05-12 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 18.27 | 0.00 | 2.222 | 7.93 | 3.29 | 1.7 | 98.3 | 0.0 | 0.83 | 1.30 | 0.22 | 0.81 | 3.95 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TAY | 10430 | 2022-05-17 | 2019-10-31 | 3.2 | 2.55 | — | 2.9 | 0.011 | 1.15 | 0.0 | 0.06 | 11.27 | 0.01 | 2.066 | 4.68 | 0.28 | 8.9 | 91.0 | 0.1 | -3.72 | 0.86 | 0.82 | 3.85 | 2.9 | 0.005 | 0.74 | 0.0 | 0.04 | 14.00 | 0.01 | 1.969 | 9.53 | 0.08 | 7.4 | 92.6 | 0.0 | 0.15 | 1.17 | 0.87 | 0.83 | 2.52 | 35241 | 4350 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2022-05-12 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.94 | 0.0 | 0.05 | 12.39 | 0.01 | 2.260 | 21.55 | 0.00 | 7.9 | 92.1 | 0.0 | -1.85 | 2.19 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S7P | 10111 | 2022-05-13 | 2019-07-05 | 3.2 | 3.38 | — | 3.4 | 0.009 | 1.13 | 0.0 | 0.08 | 10.36 | 0.01 | 2.085 | 3.44 | 0.33 | 2.8 | 97.2 | 0.0 | -3.03 | 0.65 | 0.83 | 4.30 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 14.19 | 0.00 | 1.992 | 5.56 | 0.22 | 2.0 | 98.0 | 0.0 | 1.12 | 0.54 | 0.65 | 0.85 | 2.61 | 9028 | 1128 | 1 | 0 | 11 | 0 | 0 | logfile |
✔ | 6i5A | 4413 | 2022-05-12 | 2018-11-13 | 2.3 | 2.34 | 1.50 | 2.3 | 0.012 | 1.84 | 1.0 | 0.10 | 14.16 | 0.01 | 2.431 | 6.70 | 0.74 | 1.3 | 97.4 | 1.3 | -0.89 | 0.26 | 0.84 | 3.95 | 2.3 | 0.003 | 0.54 | 0.0 | 0.04 | 16.64 | 0.00 | 2.349 | 2.93 | 4.44 | 2.0 | 98.0 | 0.0 | 2.46 | 1.23 | 0.30 | 0.88 | 4.22 | 1206 | 153 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oEU | 7795 | 2022-05-12 | 2019-03-27 | 3.5 | 3.62 | — | 3.9 | 0.014 | 1.89 | 3.0 | 0.11 | 15.00 | 0.00 | 2.157 | 5.92 | 0.85 | 10.3 | 89.6 | 0.1 | -3.81 | 0.41 | 0.65 | 1.69 | 3.7 | 0.014 | 1.42 | 0.0 | 0.04 | 16.64 | 0.01 | 1.735 | 14.70 | 0.28 | 8.5 | 91.4 | 0.1 | -0.52 | 1.53 | 0.47 | 0.69 | 0.92 | 7310 | 964 | 1 | 0 | 8 | 0 | 0 | logfile |
✘ | 5A7U | 3079 | 2022-05-12 | 2015-07-10 | 4.8 | 3.82 | — | 4.6 | 0.020 | 3.41 | 3.0 | 0.25 | 21.78 | 0.08 | 2.651 | 30.77 | 25.00 | 24.0 | 72.0 | 4.0 | -6.05 | -0.01 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 455 | 27 | 1 | 0 | 1 | 0 | 231 | logfile |
✔ | 7JGD | 22323 | 2022-05-14 | 2020-07-19 | 3.38 | 3.68 | — | 3.6 | 0.002 | 0.43 | 0.0 | 0.05 | 12.94 | 0.00 | 2.123 | 11.53 | 0.00 | 3.9 | 96.1 | 0.0 | 1.18 | 0.61 | 0.66 | 2.22 | 3.6 | 0.013 | 0.97 | 1.0 | 0.06 | 14.97 | 0.00 | 2.037 | 14.65 | 0.08 | 7.3 | 92.7 | 0.0 | 0.39 | 0.47 | 0.64 | 0.72 | 1.77 | 20292 | 1435 | 1 | 0 | 0 | 0 | 8505 | logfile |
✔ | 7KTW | 23032 | 2022-05-12 | 2020-11-24 | 4.27 | 4.73 | — | 4.4 | 0.007 | 1.12 | 0.0 | 0.05 | 12.46 | 0.01 | 2.214 | 14.28 | 0.12 | 5.1 | 94.9 | 0.0 | -4.61 | 0.81 | 0.82 | — | 4.4 | 0.003 | 0.79 | 0.0 | 0.04 | 13.24 | 0.00 | 2.137 | 19.56 | 0.12 | 3.3 | 96.7 | 0.0 | 0.47 | 0.94 | 0.80 | 0.80 | — | 7577 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |