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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WYK | 21967 | 2024-03-10 | 2020-05-13 | 4.0 | 4.14 | — | 4.2 | 0.007 | 0.77 | 0.0 | 0.05 | 11.98 | 0.00 | 2.223 | 5.97 | 0.00 | 3.4 | 96.6 | 0.0 | -2.28 | 0.62 | 0.77 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.04 | 16.10 | 0.00 | 2.204 | 10.05 | 4.29 | 1.9 | 98.1 | 0.0 | 2.01 | 0.80 | 0.62 | 0.78 | — | 3083 | 415 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQ6 | 23482 | 2024-03-10 | 2021-02-13 | 3.28 | 4.07 | 3.16 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 15.77 | 0.00 | 1.549 | 9.45 | 1.41 | 5.5 | 94.4 | 0.2 | -4.83 | 0.90 | 0.85 | 3.36 | 3.5 | 0.002 | 0.59 | 0.0 | 0.04 | 16.29 | 0.00 | 2.146 | 7.09 | 0.88 | 3.9 | 96.1 | 0.0 | 0.16 | 1.02 | 0.91 | 0.87 | 1.86 | 5267 | 672 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C3Y | 16415 | 2024-03-11 | 2022-12-29 | 3.8 | 4.37 | 3.84 | 4.1 | 0.018 | 1.56 | 0.0 | 0.10 | 10.95 | 0.01 | 2.226 | 7.90 | 0.48 | 3.7 | 96.0 | 0.3 | 0.34 | 0.79 | 0.76 | 0.80 | 4.2 | 0.003 | 0.77 | 0.0 | 0.04 | 16.14 | 0.00 | 2.125 | 18.40 | 2.78 | 5.5 | 94.2 | 0.2 | 0.86 | 2.75 | 0.78 | 0.77 | 1.01 | 7580 | 929 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MPE | 23932 | 2024-03-15 | 2021-05-04 | 3.2 | 3.91 | — | 3.8 | 0.005 | 0.69 | 0.0 | 0.04 | 14.10 | 0.00 | 2.174 | 14.62 | 0.00 | 6.9 | 93.1 | 0.0 | -2.52 | 0.62 | 0.77 | 2.09 | 3.8 | 0.004 | 0.90 | 1.0 | 0.06 | 16.08 | 0.01 | 1.458 | 13.99 | 2.96 | 5.9 | 94.1 | 0.0 | -0.77 | 0.37 | 0.64 | 0.79 | 1.29 | 11214 | 1428 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8B | 22725 | 2024-03-10 | 2020-09-26 | 2.94 | 2.86 | — | 3.1 | 0.005 | 0.83 | 2.0 | 0.05 | 14.13 | 0.01 | 2.214 | 14.30 | 0.68 | 5.5 | 94.5 | 0.0 | -0.97 | 0.41 | 0.61 | 1.17 | 3.1 | 0.003 | 0.80 | 0.0 | 0.04 | 17.00 | 0.00 | 2.146 | 14.57 | 4.05 | 6.0 | 94.0 | 0.0 | -0.43 | 0.48 | 0.41 | 0.63 | 0.66 | 5543 | 726 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X12 | 21986 | 2024-03-10 | 2020-05-18 | 3.52 | 3.69 | — | 3.7 | 0.008 | 1.08 | 0.0 | 0.06 | 16.64 | 0.01 | 2.322 | 3.01 | 0.00 | 2.7 | 97.3 | 0.0 | -5.29 | 0.65 | 0.84 | 1.43 | 3.7 | 0.002 | 0.62 | 0.0 | 0.04 | 16.26 | 0.00 | 2.263 | 7.61 | 2.84 | 2.5 | 97.5 | 0.0 | 0.21 | 1.17 | 0.67 | 0.85 | 1.33 | 3059 | 407 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X13 | 21987 | 2024-03-10 | 2020-05-18 | 3.66 | 3.77 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 16.90 | 0.01 | 2.340 | 4.80 | 0.31 | 6.5 | 93.5 | 0.0 | -3.73 | 0.64 | 0.84 | 1.86 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 16.22 | 0.01 | 2.235 | 9.29 | 1.54 | 5.3 | 94.7 | 0.0 | 1.59 | 0.42 | 0.64 | 0.84 | 1.50 | 3136 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7A8P | 11679 | 2024-03-11 | 2020-08-30 | 3.5 | 3.61 | 3.44 | 3.6 | 0.004 | 0.53 | 0.0 | 0.03 | 16.13 | 0.00 | 2.165 | 2.86 | 0.63 | 2.2 | 97.8 | 0.0 | 0.97 | 0.73 | 0.78 | 1.97 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 17.03 | 0.01 | 2.085 | 9.48 | 2.78 | 2.1 | 97.9 | 0.0 | 2.23 | 0.49 | 0.74 | 0.80 | 2.21 | 7305 | 911 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2024-03-10 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.004 | 1.01 | 0.0 | 0.05 | 16.56 | 0.00 | 2.166 | 19.75 | 3.20 | 9.1 | 90.9 | 0.0 | -3.22 | 1.27 | 0.33 | 0.68 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2024-03-10 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.003 | 0.53 | 0.0 | 0.05 | 13.66 | 0.00 | 2.674 | 0.69 | 1.23 | 4.3 | 95.7 | 0.0 | -1.62 | 0.28 | 0.28 | 0.88 | 6.38 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8W77 | 37336 | 2024-03-10 | 2023-08-30 | 3.61 | 4.00 | 3.49 | 3.9 | 0.004 | 0.71 | 0.0 | 0.05 | 10.06 | 0.01 | 2.463 | 0.72 | 0.00 | 0.8 | 99.2 | 0.0 | 2.45 | 0.51 | 0.74 | 3.54 | 3.9 | 0.003 | 0.55 | 0.0 | 0.04 | 11.02 | 0.01 | 2.401 | 2.51 | 2.22 | 1.6 | 98.4 | 0.0 | 3.79 | 0.88 | 0.58 | 0.78 | 2.79 | 1601 | 260 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LN9 | 0928 | 2024-03-11 | 2019-12-28 | 3.4 | 3.61 | 3.06 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 12.32 | 0.00 | 2.075 | 7.70 | 0.00 | 4.1 | 95.9 | 0.0 | -3.36 | 0.63 | 0.73 | 1.41 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.89 | 0.00 | 1.273 | 10.11 | 4.06 | 4.7 | 95.3 | 0.0 | -0.48 | 0.51 | 0.62 | 0.76 | 1.24 | 7612 | 987 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8JX7 | 36691 | 2024-03-15 | 2023-06-30 | 3.6 | 4.97 | 3.68 | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 17.21 | 0.00 | 2.057 | 8.94 | 0.00 | 2.3 | 97.7 | 0.0 | 0.20 | 0.63 | 0.77 | 0.93 | 4.2 | 0.003 | 0.92 | 0.0 | 0.05 | 16.84 | 0.00 | 2.140 | 16.51 | 2.07 | 2.1 | 97.9 | 0.0 | 0.39 | 1.71 | 0.63 | 0.84 | 0.90 | 11237 | 1416 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDN | 28037 | 2024-03-10 | 2022-09-05 | 3.8 | 3.47 | 3.75 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.31 | 0.00 | 2.205 | 6.81 | 0.46 | 5.7 | 94.1 | 0.2 | 2.77 | 0.65 | 0.60 | 0.13 | 3.3 | 0.002 | 0.58 | 0.0 | 0.03 | 13.70 | 0.00 | 2.177 | 7.12 | 3.23 | 3.7 | 96.1 | 0.2 | 2.99 | 1.03 | 0.70 | 0.71 | 2.12 | 3683 | 579 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8JVH | 36674 | 2024-03-14 | 2023-06-28 | 3.19 | 3.79 | 3.33 | 3.7 | 0.005 | 0.78 | 0.0 | 0.05 | 9.56 | 0.00 | 2.195 | 2.24 | 0.18 | 8.6 | 91.4 | 0.0 | -4.48 | 0.65 | 0.74 | 1.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9699 | 1205 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD2 | 17598 | 2024-03-11 | 2023-06-11 | 3.25 | 2.29 | 3.19 | 2.1 | 0.004 | 0.52 | 0.0 | 0.04 | 12.99 | 0.00 | 2.322 | 3.02 | 0.00 | 1.4 | 98.6 | 0.0 | 0.72 | 0.62 | 0.78 | 3.03 | 2.1 | 0.003 | 0.52 | 0.0 | 0.04 | 15.84 | 0.00 | 2.245 | 4.80 | 2.56 | 1.4 | 98.6 | 0.0 | 2.59 | 0.97 | 0.68 | 0.82 | 2.36 | 8270 | 1047 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SC1 | 40334 | 2024-03-10 | 2023-04-04 | 2.92 | 3.14 | 2.89 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 10.47 | 0.01 | 2.266 | 1.15 | 0.00 | 2.5 | 97.5 | 0.0 | -0.78 | 0.58 | 0.81 | 2.42 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 13.73 | 0.00 | 2.195 | 2.73 | 1.89 | 1.4 | 98.6 | 0.0 | 1.94 | 1.99 | 0.61 | 0.83 | 1.25 | 3447 | 446 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PD5 | 17601 | 2024-03-11 | 2023-06-11 | 3.4 | 2.30 | 3.32 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 13.12 | 0.00 | 2.148 | 2.18 | 0.00 | 2.2 | 97.8 | 0.0 | 1.83 | 0.61 | 0.77 | 2.43 | 2.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.95 | 0.00 | 2.268 | 4.48 | 2.28 | 1.7 | 98.3 | 0.0 | 2.65 | 0.49 | 0.68 | 0.81 | 2.00 | 8093 | 1024 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y7W | 33672 | 2024-03-10 | 2022-06-22 | 2.4 | 2.70 | 2.46 | 2.7 | 0.006 | 0.78 | 0.0 | 0.08 | 17.20 | 0.00 | 1.907 | 5.88 | 1.11 | 3.0 | 97.0 | 0.0 | 0.06 | 0.68 | 0.85 | 4.04 | 2.7 | 0.003 | 0.56 | 0.0 | 0.04 | 16.28 | 0.00 | 2.154 | 5.17 | 2.45 | 2.5 | 97.5 | 0.0 | 1.23 | 1.16 | 0.70 | 0.87 | 3.69 | 4310 | 529 | 1 | 0 | 7 | 48 | 0 | logfile |
✔ | 7Y7Z | 33675 | 2024-03-10 | 2022-06-22 | 3.2 | 3.57 | 3.17 | 3.5 | 0.009 | 1.04 | 0.0 | 0.05 | 15.11 | 0.01 | 2.037 | 11.20 | 0.00 | 7.2 | 92.8 | 0.0 | -0.11 | 0.59 | 0.80 | 1.84 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 15.71 | 0.00 | 2.289 | 6.42 | 2.65 | 5.8 | 94.2 | 0.0 | 0.76 | 0.45 | 0.64 | 0.84 | 1.43 | 4303 | 532 | 1 | 0 | 5 | 0 | 0 | logfile |