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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PiK | 13439 | 2023-04-23 | 2021-08-20 | 2.68 | 2.96 | 2.75 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 19.30 | 0.00 | 2.284 | 3.33 | 0.08 | 2.9 | 97.1 | 0.0 | 0.06 | 0.73 | 0.79 | 3.31 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 21.11 | 0.00 | 2.102 | 4.08 | 1.73 | 2.9 | 97.1 | 0.0 | 0.60 | 0.33 | 0.73 | 0.82 | 2.74 | 15475 | 1624 | 7 | 126 | 0 | 0 | 0 | logfile |
✘ | 6Z5R | 11080 | 2023-04-27 | 2020-05-27 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25048 | 2336 | 72 | 0 | 105 | 3 | 0 | logfile |
✔ | 7WJN | 32546 | 2023-04-22 | 2022-01-07 | 3.3 | 3.46 | — | 3.4 | 0.004 | 0.59 | 0.0 | 0.04 | 10.18 | 0.00 | 2.235 | 2.90 | 0.58 | 4.1 | 95.9 | 0.0 | 2.06 | 0.67 | 0.82 | 2.37 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 13.94 | 0.00 | 2.231 | 5.48 | 0.29 | 5.4 | 94.6 | 0.0 | 2.02 | 1.17 | 0.68 | 0.85 | 1.83 | 13054 | 1616 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8DD3 | 27333 | 2023-04-24 | 2022-06-17 | 2.9 | 2.70 | 2.96 | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 12.76 | 0.00 | 2.021 | 6.29 | 0.00 | 3.7 | 96.3 | 0.0 | 0.77 | 0.77 | 0.85 | 4.03 | 3.1 | 0.003 | 0.64 | 0.0 | 0.04 | 15.39 | 0.00 | 2.145 | 5.77 | 1.96 | 2.8 | 97.2 | 0.0 | 1.18 | 1.18 | 0.76 | 0.87 | 3.47 | 17459 | 2121 | 17 | 0 | 28 | 0 | 0 | logfile |
✔ | 7LUE | 23521 | 2023-04-23 | 2021-02-22 | 2.9 | 3.08 | — | 3.1 | 0.003 | 0.49 | 0.0 | 0.04 | 10.43 | 0.00 | 2.200 | 5.63 | 0.86 | 1.7 | 98.3 | 0.0 | 0.33 | 0.73 | 0.82 | 3.96 | 3.0 | 0.006 | 0.63 | 0.0 | 0.05 | 15.37 | 0.00 | 2.079 | 9.53 | 3.11 | 2.8 | 97.2 | 0.0 | -0.10 | 1.16 | 0.69 | 0.82 | 3.55 | 15018 | 1947 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S9V | 24938 | 2023-04-23 | 2021-09-21 | 3.3 | 3.25 | — | 3.4 | 0.007 | 0.86 | 0.0 | 0.05 | 13.96 | 0.01 | 2.257 | 2.04 | 0.00 | 5.1 | 94.9 | 0.0 | -1.75 | 0.83 | 0.82 | 2.23 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 15.36 | 0.00 | 2.200 | 3.70 | 0.20 | 3.1 | 96.9 | 0.0 | -0.13 | 1.19 | 0.83 | 0.83 | 2.05 | 14286 | 1825 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 4Ui9 | 2924 | 2023-04-23 | 2015-03-27 | 3.6 | 3.87 | — | 3.6 | 0.016 | 1.97 | 124.0 | 0.11 | 17.96 | 0.01 | 0.849 | 19.88 | 11.86 | 5.3 | 92.8 | 1.9 | -1.90 | 0.85 | 0.73 | 1.60 | 3.6 | 0.003 | 0.81 | 0.0 | 0.04 | 17.07 | 0.00 | 2.102 | 15.06 | 0.42 | 5.4 | 94.2 | 0.4 | 0.87 | 3.18 | 0.89 | 0.83 | 1.17 | 66453 | 8472 | 25 | 0 | 5 | 0 | 0 | logfile |
✔ | 7MiL | 23855 | 2023-04-26 | 2021-04-17 | 3.86 | 3.21 | — | 3.2 | 0.007 | 1.17 | 0.0 | 0.05 | 12.79 | 0.01 | 2.304 | 2.86 | 0.68 | 4.4 | 95.4 | 0.2 | -5.90 | 0.75 | 0.77 | 2.34 | 3.2 | 0.002 | 0.62 | 0.0 | 0.04 | 15.36 | 0.00 | 2.074 | 7.05 | 0.26 | 3.9 | 96.1 | 0.0 | -0.93 | 1.53 | 0.75 | 0.78 | 1.91 | 21753 | 2624 | 8 | 0 | 9 | 0 | 0 | logfile |
✔ | 7KGG | 22869 | 2023-04-26 | 2020-10-16 | 2.97 | 2.88 | — | 2.9 | 0.006 | 0.92 | 3.0 | 0.05 | 14.03 | 0.01 | 2.108 | 4.66 | 1.09 | 1.0 | 99.0 | 0.0 | 2.20 | 0.71 | 0.81 | 2.31 | 2.9 | 0.004 | 0.61 | 0.0 | 0.04 | 17.14 | 0.00 | 2.158 | 6.31 | 2.03 | 1.4 | 98.6 | 0.0 | 1.43 | 1.16 | 0.73 | 0.85 | 2.19 | 23677 | 3060 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 7ABR | 11707 | 2023-04-28 | 2020-09-08 | 3.7 | 3.80 | — | 3.7 | 0.011 | 1.09 | 0.0 | 0.05 | 14.93 | 0.00 | 2.066 | 19.60 | 0.51 | 9.6 | 90.1 | 0.2 | -3.56 | 0.86 | 0.83 | 1.86 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 16.46 | 0.00 | 2.104 | 14.20 | 0.24 | 7.0 | 93.0 | 0.0 | 0.10 | 0.65 | 0.85 | 0.82 | 1.17 | 27209 | 3419 | 13 | 0 | 37 | 0 | 0 | logfile |
✔ | 6RWE | 10038 | 2023-04-20 | 2019-06-04 | 3.0 | 3.12 | — | 3.7 | 0.009 | 1.02 | 1.0 | 0.06 | 13.12 | 0.01 | 1.975 | 6.33 | 0.73 | 7.4 | 92.5 | 0.1 | -4.84 | 0.44 | 0.32 | 0.00 | 3.1 | 0.008 | 1.06 | 0.0 | 0.06 | 18.26 | 0.01 | 1.845 | 18.12 | 2.92 | 7.6 | 92.3 | 0.0 | -2.05 | 2.44 | 0.76 | 0.81 | 1.72 | 53719 | 6454 | 26 | 95 | 8 | 0 | 0 | logfile |
✔ | 7SiL | 25143 | 2023-04-22 | 2021-10-14 | 2.7 | 1.97 | — | 1.5 | 0.004 | 0.70 | 0.0 | 0.05 | 13.66 | 0.00 | 2.160 | 6.65 | 0.15 | 2.1 | 97.9 | 0.0 | 0.60 | 0.75 | 0.72 | 3.10 | 1.6 | 0.003 | 0.58 | 0.0 | 0.04 | 16.10 | 0.00 | 2.167 | 8.36 | 1.77 | 2.8 | 97.2 | 0.0 | 0.57 | 0.39 | 0.77 | 0.78 | 2.87 | 12924 | 1564 | 8 | 0 | 34 | 0 | 0 | logfile |
✔ | 7USC | 26732 | 2023-04-26 | 2022-04-25 | 3.0 | 3.26 | 2.98 | 3.1 | 0.007 | 0.62 | 0.0 | 0.04 | 14.12 | 0.00 | 2.130 | 6.55 | 0.00 | 3.0 | 97.0 | 0.0 | 1.36 | 0.90 | 0.87 | 2.78 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 16.28 | 0.00 | 2.215 | 4.76 | 0.91 | 1.4 | 98.6 | 0.0 | 2.95 | 0.50 | 0.91 | 0.90 | 2.32 | 21709 | 2673 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KGH | 22870 | 2023-04-26 | 2020-10-16 | 3.79 | 3.35 | — | 3.4 | 0.005 | 0.82 | 3.0 | 0.05 | 14.35 | 0.01 | 1.910 | 9.42 | 0.97 | 1.7 | 98.3 | 0.0 | 1.37 | 0.56 | 0.71 | 1.27 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 16.04 | 0.00 | 2.172 | 10.71 | 0.39 | 2.1 | 97.9 | 0.0 | 1.23 | 1.19 | 0.59 | 0.72 | 1.04 | 23505 | 3060 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7DUW | 30869 | 2023-04-22 | 2021-01-12 | 2.96 | 2.75 | — | 3.0 | 0.008 | 1.02 | 0.0 | 0.05 | 16.61 | 0.01 | 2.162 | 13.66 | 0.15 | 4.0 | 96.0 | 0.0 | 1.16 | 0.78 | 0.82 | 3.01 | 3.0 | 0.003 | 0.62 | 0.0 | 0.04 | 16.53 | 0.01 | 2.176 | 13.28 | 1.22 | 4.0 | 96.0 | 0.0 | 1.11 | 2.27 | 0.78 | 0.84 | 2.32 | 13276 | 1640 | 6 | 0 | 12 | 2 | 0 | logfile |
✔ | 7B5R | 12048 | 2023-04-22 | 2020-12-07 | 3.8 | 4.08 | 3.77 | 3.9 | 0.006 | 0.81 | 0.0 | 0.05 | 14.43 | 0.00 | 2.001 | 16.73 | 0.00 | 9.3 | 90.7 | 0.0 | -1.41 | 0.85 | 0.81 | 1.55 | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 16.00 | 0.00 | 2.185 | 12.98 | 0.39 | 6.3 | 93.7 | 0.0 | -0.32 | 1.20 | 0.85 | 0.81 | 1.31 | 11606 | 1430 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JVC | 22506 | 2023-04-29 | 2020-08-20 | 3.3 | 3.50 | 3.41 | 3.4 | 0.013 | 1.42 | 0.0 | 0.09 | 9.63 | 0.01 | 2.428 | 0.97 | 0.13 | 2.3 | 97.6 | 0.1 | 0.71 | 0.78 | 0.78 | 3.47 | 3.4 | 0.004 | 0.64 | 0.0 | 0.05 | 12.95 | 0.00 | 2.230 | 5.01 | 0.08 | 2.8 | 97.2 | 0.0 | 0.75 | 1.21 | 0.81 | 0.84 | 3.07 | 29562 | 4272 | 27 | 0 | 66 | 0 | 0 | logfile |
✘ | 8AYH | 15713 | 2023-04-25 | 2022-09-02 | 3.35 | 3.45 | 3.40 | 3.4 | 0.007 | 0.91 | 0.0 | 0.06 | 14.44 | 0.01 | 2.114 | 5.00 | 0.65 | 6.5 | 93.4 | 0.1 | -4.12 | 0.83 | 0.85 | 2.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19109 | 2414 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 6WBF | 21588 | 2023-04-25 | 2020-03-26 | 2.83 | 2.57 | — | 3.0 | 0.007 | 0.83 | 0.0 | 0.04 | 17.10 | 0.01 | 2.183 | 11.63 | 0.38 | 5.0 | 95.0 | 0.0 | -1.45 | 0.44 | 0.62 | 2.99 | 3.0 | 0.005 | 0.66 | 0.0 | 0.04 | 17.02 | 0.00 | 2.227 | 12.29 | 2.72 | 4.0 | 96.0 | 0.0 | 1.20 | 1.28 | 0.62 | 0.79 | 3.16 | 19712 | 2408 | 14 | 0 | 49 | 0 | 0 | logfile |
✔ | 7MR3 | 23955 | 2023-04-26 | 2021-05-07 | 3.6 | 4.01 | — | 3.9 | 0.005 | 0.83 | 0.0 | 0.05 | 16.39 | 0.01 | 2.250 | 5.33 | 0.00 | 6.5 | 93.5 | 0.0 | -1.62 | 0.83 | 0.82 | 1.78 | 3.9 | 0.002 | 0.59 | 0.0 | 0.04 | 17.78 | 0.00 | 2.192 | 8.70 | 0.08 | 5.4 | 94.6 | 0.0 | 0.26 | 0.31 | 0.83 | 0.83 | 1.25 | 23615 | 2854 | 5 | 40 | 0 | 0 | 0 | logfile |