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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y9U | 33692 | 2023-09-28 | 2022-06-26 | 3.3 | 3.48 | 3.23 | 3.5 | 0.011 | 1.27 | 2.0 | 0.06 | 9.98 | 0.01 | 2.311 | 3.19 | 0.00 | 5.3 | 94.7 | 0.0 | -6.23 | 0.60 | 0.84 | 3.22 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 13.73 | 0.00 | 2.158 | 4.60 | 0.24 | 3.6 | 96.4 | 0.0 | -1.82 | 0.62 | 0.59 | 0.84 | 2.56 | 7748 | 988 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7YJ4 | 33871 | 2023-09-29 | 2022-07-19 | 3.19 | 3.39 | 3.21 | 3.4 | 0.004 | 0.67 | 0.0 | 0.05 | 14.73 | 0.01 | 2.175 | 9.63 | 1.55 | 5.5 | 94.4 | 0.1 | -0.72 | 0.60 | 0.73 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8985 | 1154 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S06 | 24785 | 2023-09-28 | 2021-08-30 | 3.3 | 3.59 | 3.40 | 3.6 | 0.004 | 0.66 | 0.0 | 0.05 | 15.06 | 0.00 | 2.199 | 7.68 | 0.00 | 6.2 | 93.8 | 0.0 | 0.97 | 0.65 | 0.78 | 2.56 | 3.6 | 0.003 | 0.64 | 0.0 | 0.05 | 17.38 | 0.00 | 2.229 | 7.74 | 0.46 | 5.9 | 94.1 | 0.0 | 0.92 | 1.07 | 0.69 | 0.83 | 2.34 | 7862 | 918 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 7SAU | 24957 | 2023-09-28 | 2021-09-23 | 3.0 | 2.41 | 2.77 | 2.7 | 0.005 | 0.61 | 0.0 | 0.04 | 13.77 | 0.01 | 2.122 | 6.13 | 0.15 | 5.1 | 94.9 | 0.0 | 0.64 | 0.61 | 0.84 | 3.01 | 2.7 | 0.003 | 0.55 | 0.0 | 0.04 | 17.55 | 0.00 | 2.131 | 7.16 | 1.21 | 4.5 | 95.5 | 0.0 | 2.39 | 0.54 | 0.60 | 0.84 | 2.26 | 6317 | 791 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LMS | 23441 | 2023-09-28 | 2021-02-05 | 3.5 | 4.13 | 3.61 | 4.0 | 0.019 | 1.52 | 0.0 | 0.09 | 10.07 | 0.01 | 2.432 | 0.41 | 0.00 | 0.2 | 99.8 | 0.0 | 0.57 | 0.81 | 0.83 | 3.45 | 4.0 | 0.002 | 0.59 | 0.0 | 0.04 | 14.69 | 0.00 | 2.183 | 6.65 | 0.38 | 1.5 | 98.5 | 0.0 | 0.72 | 1.43 | 0.74 | 0.82 | 2.22 | 4947 | 613 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 5oYG | 3861 | 2023-09-30 | 2017-09-08 | 4.06 | 4.29 | 4.02 | 4.1 | 0.007 | 1.27 | 10.0 | 0.10 | 12.53 | 0.01 | 2.282 | 5.95 | 1.98 | 6.9 | 93.1 | 0.0 | -3.35 | 0.68 | 0.83 | — | 4.1 | 0.004 | 0.73 | 0.0 | 0.04 | 12.60 | 0.00 | 2.130 | 11.47 | 0.00 | 6.0 | 94.0 | 0.0 | 0.56 | 0.84 | 0.68 | 0.82 | — | 11596 | 1418 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CKR | 30391 | 2023-09-27 | 2020-07-18 | 3.0 | 3.32 | — | 3.4 | 0.009 | 1.22 | 9.0 | 0.09 | 17.22 | 0.01 | 1.896 | 18.09 | 11.04 | 8.0 | 91.9 | 0.2 | -2.89 | 0.45 | 0.60 | 2.22 | 3.3 | 0.003 | 0.78 | 0.0 | 0.05 | 17.05 | 0.01 | 2.178 | 14.60 | 3.58 | 4.1 | 95.9 | 0.0 | 0.75 | 1.85 | 0.53 | 0.73 | 1.92 | 4094 | 597 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7EUo | 31323 | 2023-09-29 | 2021-05-18 | 2.9 | 3.61 | 2.97 | 3.5 | 0.004 | 0.65 | 0.0 | 0.05 | 13.75 | 0.00 | 2.198 | 6.82 | 0.00 | 4.3 | 95.7 | 0.0 | -0.21 | 0.63 | 0.82 | 3.21 | 3.5 | 0.005 | 0.63 | 0.0 | 0.04 | 16.29 | 0.00 | 2.116 | 8.05 | 2.79 | 4.2 | 95.8 | 0.0 | 0.19 | 0.39 | 0.60 | 0.80 | 2.63 | 8950 | 1138 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 7CQi | 30441 | 2023-09-29 | 2020-08-11 | 3.2 | 3.33 | — | 3.3 | 0.012 | 1.51 | 5.0 | 0.09 | 16.83 | 0.01 | 0.997 | 19.68 | 13.06 | 10.7 | 88.6 | 0.7 | -5.50 | 0.71 | 0.85 | 3.34 | 3.3 | 0.002 | 0.67 | 0.0 | 0.04 | 16.25 | 0.00 | 2.078 | 6.94 | 0.42 | 5.9 | 94.0 | 0.1 | -1.69 | 2.28 | 0.71 | 0.86 | 2.51 | 8881 | 1117 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8EF9 | 28075 | 2023-09-28 | 2022-09-08 | 2.4 | 2.51 | 2.38 | 2.5 | 0.013 | 0.84 | 0.0 | 0.05 | 18.48 | 0.01 | 1.958 | 9.51 | 0.00 | 5.8 | 94.0 | 0.2 | -0.41 | 0.69 | 0.76 | 2.68 | 2.5 | 0.003 | 0.57 | 0.0 | 0.04 | 19.84 | 0.00 | 1.905 | 11.65 | 0.97 | 5.6 | 94.4 | 0.0 | 0.31 | 0.34 | 0.69 | 0.78 | 2.64 | 5240 | 599 | 4 | 26 | 2 | 0 | 0 | logfile |
✘ | 7SAX | 24958 | 2023-09-28 | 2021-09-23 | 3.0 | 2.60 | 2.97 | 3.0 | 0.007 | 0.66 | 0.0 | 0.04 | 13.54 | 0.00 | 2.174 | 5.46 | 0.00 | 3.3 | 96.7 | 0.0 | 1.22 | 0.58 | 0.85 | 2.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5305 | 689 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X8S | 33058 | 2023-09-29 | 2022-03-14 | 3.09 | 3.25 | — | 3.2 | 0.020 | 0.81 | 0.0 | 0.29 | 15.74 | 0.00 | 2.155 | 9.12 | 0.22 | 3.4 | 96.5 | 0.1 | 0.09 | 0.65 | 0.76 | 2.35 | 3.2 | 0.003 | 0.92 | 0.0 | 0.16 | 16.50 | 0.00 | 2.153 | 11.15 | 0.33 | 3.5 | 96.5 | 0.0 | 0.34 | 0.32 | 0.63 | 0.78 | 2.18 | 8480 | 1052 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7N0K | 24107 | 2023-09-28 | 2021-05-25 | 3.5 | 4.16 | — | 4.1 | 0.003 | 0.56 | 0.0 | 0.03 | 18.36 | 0.00 | 2.238 | 8.16 | 7.46 | 1.0 | 99.0 | 0.0 | -2.20 | 0.63 | 0.77 | 1.65 | 4.1 | 0.003 | 0.61 | 0.0 | 0.03 | 19.19 | 0.00 | 2.266 | 8.55 | 0.93 | 2.3 | 97.7 | 0.0 | 3.43 | 0.71 | 0.60 | 0.75 | 0.87 | 5154 | 626 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L0P | 23099 | 2023-09-28 | 2020-12-12 | 4.1 | 3.94 | 3.91 | 4.0 | 0.006 | 1.06 | 1.0 | 0.06 | 15.23 | 0.01 | 2.231 | 8.45 | 0.53 | 6.8 | 92.9 | 0.3 | -3.81 | 0.56 | 0.72 | — | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 14.58 | 0.00 | 2.155 | 16.76 | 0.00 | 5.5 | 94.4 | 0.1 | -0.54 | 1.06 | 0.60 | 0.74 | — | 6953 | 888 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y4S | 33606 | 2023-09-28 | 2022-06-16 | 3.5 | 3.72 | 3.47 | 3.8 | 0.004 | 0.74 | 0.0 | 0.04 | 12.74 | 0.01 | 2.373 | 5.20 | 0.46 | 2.9 | 97.1 | 0.0 | 1.47 | 0.69 | 0.77 | 3.18 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 15.07 | 0.00 | 2.245 | 9.12 | 0.69 | 2.5 | 97.5 | 0.0 | 2.64 | 1.58 | 0.73 | 0.79 | 2.96 | 4940 | 686 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NNT | 12483 | 2023-09-28 | 2021-02-25 | 3.4 | 3.53 | 3.51 | 3.5 | 0.005 | 0.66 | 0.0 | 0.05 | 13.72 | 0.00 | 2.218 | 6.31 | 0.00 | 2.2 | 97.8 | 0.0 | -0.55 | 0.67 | 0.82 | 2.48 | 3.5 | 0.004 | 0.55 | 0.0 | 0.04 | 15.65 | 0.00 | 2.225 | 8.18 | 0.36 | 2.1 | 97.9 | 0.0 | 0.34 | 0.28 | 0.68 | 0.84 | 2.10 | 7666 | 979 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DA5 | 30623 | 2023-09-27 | 2020-10-14 | 3.3 | 3.66 | — | 3.8 | 0.008 | 1.21 | 10.0 | 0.09 | 16.47 | 0.01 | 1.673 | 16.04 | 10.06 | 9.1 | 90.6 | 0.3 | -3.63 | 0.43 | 0.58 | 1.81 | 3.7 | 0.004 | 0.78 | 0.0 | 0.04 | 16.11 | 0.00 | 2.233 | 8.41 | 0.91 | 5.1 | 94.9 | 0.0 | 0.00 | 1.49 | 0.49 | 0.71 | 2.09 | 4013 | 591 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EVY | 31341 | 2023-09-30 | 2021-05-24 | 2.98 | 3.64 | — | 3.6 | 0.017 | 0.62 | 0.0 | 0.16 | 12.41 | 0.00 | 2.061 | 8.83 | 0.91 | 3.1 | 96.9 | 0.0 | -1.68 | 0.58 | 0.77 | 2.30 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 15.10 | 0.00 | 2.183 | 8.67 | 1.83 | 3.6 | 96.4 | 0.0 | -0.50 | 0.46 | 0.55 | 0.76 | 2.69 | 9024 | 1144 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WVW | 32860 | 2023-09-28 | 2022-02-11 | 3.1 | 3.26 | — | 3.2 | 0.002 | 0.50 | 0.0 | 0.04 | 13.51 | 0.00 | 2.197 | 9.35 | 0.00 | 1.5 | 98.5 | 0.0 | 0.78 | 0.62 | 0.77 | 2.19 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 15.56 | 0.00 | 2.170 | 11.66 | 0.26 | 2.5 | 97.5 | 0.0 | 0.69 | 1.18 | 0.65 | 0.83 | 2.47 | 7169 | 924 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WAZ | 32390 | 2023-09-30 | 2021-12-15 | 3.4 | 3.85 | — | 3.4 | 0.002 | 0.59 | 0.0 | 0.04 | 18.60 | 0.00 | 2.160 | 11.49 | 5.53 | 4.0 | 95.8 | 0.2 | 0.74 | 0.67 | 0.58 | 0.88 | 3.4 | 0.003 | 0.68 | 0.0 | 0.04 | 19.75 | 0.00 | 2.084 | 17.55 | 0.60 | 5.8 | 94.1 | 0.1 | -0.13 | 1.68 | 0.69 | 0.62 | 0.88 | 11034 | 952 | 4 | 157 | 0 | 0 | 0 | logfile |