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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6NT9 | 0506 | 2023-04-21 | 2019-01-28 | 3.3 | 3.42 | — | 3.3 | 0.010 | 0.89 | 0.0 | 0.06 | 9.66 | 0.01 | 2.250 | 1.52 | 0.18 | 3.5 | 96.5 | 0.0 | -2.03 | 0.81 | 0.86 | 3.98 | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 14.15 | 0.00 | 2.226 | 4.50 | 0.18 | 1.8 | 98.2 | 0.0 | 2.60 | 0.58 | 0.83 | 0.88 | 3.12 | 9906 | 1228 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9S | 6272 | 2023-04-21 | 2015-02-19 | 2.6 | 3.83 | — | 3.5 | 0.020 | 1.80 | 0.0 | 0.12 | 18.55 | 0.01 | 0.216 | 25.10 | 6.86 | 1.3 | 98.0 | 0.8 | 1.97 | 0.68 | 0.76 | 3.15 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 17.43 | 0.00 | 1.145 | 9.20 | 1.43 | 1.5 | 98.5 | 0.0 | 1.37 | 1.90 | 0.70 | 0.89 | 3.19 | 9813 | 1191 | 3 | 0 | 15 | 315 | 0 | logfile |
✔ | 6Y9X | 10740 | 2023-04-24 | 2020-03-10 | 4.4 | 4.70 | 4.26 | 4.4 | 0.012 | 1.07 | 3.0 | 0.11 | 13.05 | 0.01 | 1.344 | 12.07 | 0.45 | 2.0 | 98.0 | 0.0 | -0.96 | 0.69 | 0.74 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.05 | 13.72 | 0.01 | 2.099 | 20.44 | 0.05 | 3.1 | 96.9 | 0.0 | -0.34 | 1.79 | 0.73 | 0.78 | — | 18418 | 2364 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B8T | 15921 | 2023-04-20 | 2022-10-05 | 4.2 | 3.64 | 4.09 | 4.1 | 0.011 | 1.78 | 2.0 | 0.09 | 14.33 | 0.01 | 2.558 | 0.50 | 1.78 | 3.9 | 95.8 | 0.3 | -1.08 | 0.73 | 0.77 | — | 4.0 | 0.008 | 0.97 | 0.0 | 0.05 | 13.59 | 0.01 | 2.070 | 11.18 | 0.00 | 5.9 | 94.1 | 0.0 | -0.32 | 0.52 | 0.74 | 0.78 | — | 7180 | 989 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N7V | 0364 | 2023-04-22 | 2018-11-28 | 3.8 | 4.02 | — | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 14.42 | 0.00 | 2.119 | 3.58 | 0.15 | 3.8 | 96.2 | 0.0 | -3.41 | 0.76 | 0.74 | 1.21 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 16.51 | 0.00 | 1.834 | 12.45 | 0.30 | 4.2 | 95.8 | 0.0 | -0.67 | 0.95 | 0.78 | 0.77 | 1.06 | 12861 | 1606 | 12 | 16 | 10 | 0 | 0 | logfile |
✔ | 7ZDH | 14648 | 2023-04-24 | 2022-03-29 | 3.46 | 3.63 | — | 3.4 | 0.005 | 0.77 | 0.0 | 1.03 | 15.81 | 0.01 | 2.238 | 4.73 | 0.28 | 3.1 | 96.9 | 0.0 | -0.39 | 0.92 | 0.89 | 2.07 | 3.4 | 0.008 | 1.56 | 0.0 | 0.31 | 16.07 | 0.00 | 2.099 | 8.02 | 0.28 | 3.1 | 96.9 | 0.0 | 0.92 | 0.28 | 0.91 | 0.88 | 2.16 | 67219 | 8227 | 66 | 0 | 35 | 0 | 0 | logfile |
✔ | 6LVF | 0992 | 2023-04-22 | 2020-02-02 | 3.7 | 3.81 | — | 3.7 | 0.010 | 1.23 | 0.0 | 0.06 | 12.77 | 0.01 | 2.216 | 6.98 | 0.16 | 8.3 | 91.7 | 0.0 | -4.32 | 0.68 | 0.78 | 1.66 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 14.81 | 0.00 | 2.213 | 11.95 | 0.24 | 5.9 | 94.1 | 0.0 | 0.11 | 1.21 | 0.67 | 0.77 | 0.89 | 12380 | 1586 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6VVo | 21405 | 2023-04-27 | 2020-02-18 | 3.4 | 3.45 | — | 3.3 | 0.008 | 0.82 | 0.0 | 0.05 | 14.00 | 0.00 | 1.915 | 9.84 | 0.41 | 4.7 | 95.2 | 0.1 | -2.93 | 0.89 | 0.86 | 2.75 | 3.3 | 0.002 | 0.56 | 0.0 | 0.04 | 15.23 | 0.00 | 2.003 | 7.61 | 0.18 | 3.3 | 96.7 | 0.0 | 0.57 | 1.15 | 0.90 | 0.88 | 2.45 | 19668 | 2493 | 13 | 0 | 9 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2023-04-19 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S8J | 10124 | 2023-04-22 | 2019-07-10 | 2.91 | 3.06 | 3.00 | 3.0 | 0.006 | 1.00 | 0.0 | 0.06 | 13.26 | 0.01 | 2.185 | 7.67 | 3.27 | 3.3 | 96.5 | 0.2 | -0.67 | 0.74 | 0.84 | 4.26 | 3.0 | 0.005 | 0.76 | 0.0 | 0.05 | 15.81 | 0.01 | 2.178 | 5.75 | 3.35 | 3.6 | 96.4 | 0.0 | -0.66 | 1.00 | 0.76 | 0.88 | 3.89 | 12391 | 1584 | 27 | 0 | 6 | 163 | 0 | logfile |
✔ | 7XJP | 33233 | 2023-04-24 | 2022-04-18 | 2.71 | 3.46 | 2.74 | 3.2 | 0.005 | 0.80 | 0.0 | 0.05 | 13.01 | 0.00 | 2.215 | 12.28 | 0.82 | 3.6 | 96.3 | 0.1 | -1.81 | 0.78 | 0.70 | 2.56 | 3.3 | 0.004 | 0.66 | 0.0 | 0.04 | 15.83 | 0.00 | 2.190 | 11.04 | 1.43 | 2.9 | 97.1 | 0.0 | 0.66 | 0.67 | 0.84 | 0.82 | 2.09 | 8930 | 1089 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 6XKV | 22226 | 2023-04-22 | 2020-06-27 | 3.5 | 3.61 | — | 3.6 | 0.009 | 1.02 | 1.0 | 0.07 | 13.76 | 0.01 | 1.987 | 23.35 | 0.08 | 16.4 | 83.2 | 0.4 | -4.31 | 0.74 | 0.81 | 2.35 | 3.6 | 0.004 | 0.76 | 0.0 | 0.04 | 15.67 | 0.00 | 2.112 | 9.17 | 0.56 | 11.3 | 88.6 | 0.1 | -0.53 | 2.05 | 0.73 | 0.84 | 2.13 | 13079 | 1678 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 7N5D | 24186 | 2023-04-25 | 2021-06-05 | 2.8 | 2.25 | — | 1.3 | 0.023 | 1.52 | 0.0 | 0.09 | 9.91 | 0.01 | 2.378 | 0.32 | 0.00 | 1.1 | 98.9 | 0.0 | 1.83 | 0.84 | 0.83 | 4.14 | 1.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.00 | 0.00 | 2.173 | 6.93 | 1.62 | 1.9 | 98.1 | 0.0 | 2.44 | 0.66 | 0.82 | 0.82 | 3.20 | 20593 | 2612 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2023-04-21 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 15.86 | 0.01 | 2.225 | 15.74 | 0.34 | 4.6 | 95.3 | 0.1 | -0.56 | 0.46 | 0.42 | 0.55 | 0.22 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V86 | 21096 | 2023-04-24 | 2019-12-10 | 4.63 | 4.30 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.04 | 14.79 | 0.01 | 1.470 | 23.47 | 0.70 | 13.1 | 86.6 | 0.2 | -4.51 | 0.80 | 0.73 | — | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 14.55 | 0.00 | 2.025 | 17.65 | 0.35 | 11.9 | 88.1 | 0.0 | -1.22 | 0.69 | 0.81 | 0.73 | — | 17781 | 2229 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 6X13 | 21987 | 2023-04-19 | 2020-05-18 | 3.66 | 3.77 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 16.27 | 0.01 | 2.340 | 4.80 | 0.31 | 6.5 | 93.5 | 0.0 | -3.73 | 0.64 | 0.84 | 1.86 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 16.00 | 0.00 | 2.254 | 8.98 | 0.00 | 5.3 | 94.7 | 0.0 | 1.35 | 0.42 | 0.64 | 0.84 | 1.86 | 3136 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7oGM | 12884 | 2023-04-24 | 2021-05-06 | 3.7 | 3.96 | 3.87 | 3.8 | 0.015 | 1.84 | 9.0 | 0.11 | 16.90 | 0.01 | 2.245 | 5.94 | 3.12 | 3.6 | 96.3 | 0.0 | -1.16 | 0.85 | 0.83 | 2.45 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 16.22 | 0.00 | 2.161 | 7.18 | 0.40 | 2.9 | 97.1 | 0.0 | 0.75 | 1.27 | 0.83 | 0.80 | 2.12 | 17683 | 2454 | 10 | 49 | 0 | 0 | 0 | logfile |
✔ | 7D3S | 30566 | 2023-04-20 | 2020-09-20 | 2.9 | 2.73 | 2.75 | 2.8 | 0.004 | 0.64 | 0.0 | 0.04 | 13.88 | 0.00 | 2.237 | 10.24 | 0.00 | 4.0 | 96.0 | 0.0 | -2.28 | 0.56 | 0.75 | 3.07 | 2.8 | 0.003 | 0.54 | 0.0 | 0.04 | 16.90 | 0.00 | 2.096 | 9.21 | 0.78 | 3.1 | 96.9 | 0.0 | 0.98 | 0.48 | 0.60 | 0.79 | 2.75 | 8338 | 1048 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CTT | 30469 | 2023-04-21 | 2020-08-20 | 3.2 | 3.41 | — | 3.3 | 0.007 | 0.51 | 0.0 | 0.04 | 12.97 | 0.00 | 2.114 | 10.28 | 1.01 | 4.9 | 95.1 | 0.0 | -3.11 | 0.71 | 0.77 | 2.67 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 14.95 | 0.00 | 2.061 | 14.29 | 0.23 | 4.9 | 95.1 | 0.0 | -0.79 | 0.39 | 0.70 | 0.77 | 2.48 | 8912 | 1031 | 7 | 34 | 4 | 0 | 0 | logfile |
✔ | 6YTV | 10924 | 2023-04-25 | 2020-04-24 | 4.39 | 3.96 | 4.35 | 3.9 | 0.004 | 0.78 | 0.0 | 0.04 | 14.56 | 0.00 | 2.183 | 16.16 | 0.00 | 6.0 | 93.5 | 0.4 | -2.08 | 0.58 | 0.76 | — | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 14.47 | 0.00 | 2.203 | 12.64 | 0.14 | 6.8 | 92.9 | 0.3 | -0.11 | 1.55 | 0.57 | 0.74 | — | 19560 | 2520 | 10 | 0 | 0 | 0 | 0 | logfile |