Table showing results for December 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7KAi	22771	2021-12-02	2020-10-01	3.2	3.86	3.25	3.5	0.003	0.53	0.0	0.04	12.28	0.00	2.229	4.23	0.00	3.6	96.4	0.0	-1.28	0.67	0.85	2.59	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10718	1343	7	0	56	0	0	logfile
✔	7CKZ	30395	2021-12-02	2020-07-20	3.1	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8133	1037	5	0	3	0	0	logfile
✔	7CKY	30394	2021-12-02	2020-07-20	3.2	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8128	1038	5	0	2	0	0	logfile
✔	6LW1	30002	2021-12-02	2020-02-06	2.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12412	1526	4	0	2	0	0	logfile
✘	7CZ5	30505	2021-12-01	2020-09-07	2.6	2.89	—	2.9	0.004	0.69	0.0	0.05	13.20	0.00	2.186	6.27	0.00	3.3	96.7	0.0	-2.04	0.60	0.80	4.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8336	1046	11	0	3	3	0	logfile
✔	7KAM	22775	2021-12-02	2020-10-01	3.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10916	1445	7	0	0	0	0	logfile
✔	6Z3Z	11067	2021-12-01	2020-05-22	3.19	3.90	—	3.6	0.003	0.62	0.0	0.04	13.78	0.00	2.198	8.80	0.31	6.4	93.6	0.0	-0.26	0.62	0.69	0.75	3.7	0.010	1.06	0.0	0.04	15.74	0.01	2.225	15.97	0.46	7.7	92.3	0.0	0.03	0.66	0.63	0.72	0.90	6115	769	2	0	0	0	0	logfile
✔	7BTX	30190	2021-12-02	2020-04-03	2.8	2.99	—	3.0	0.008	1.09	2.0	0.06	14.93	0.01	2.280	4.49	0.26	8.1	91.1	0.7	-4.94	0.68	0.86	4.33	3.0	0.003	0.67	0.0	0.04	16.81	0.01	2.178	8.68	2.03	8.2	91.5	0.2	-0.66	0.54	0.68	0.87	3.88	10168	1268	4	0	0	0	0	logfile
✔	6Z3Y	11066	2021-12-01	2020-05-22	3.51	3.78	3.53	3.6	0.002	0.52	0.0	0.04	11.75	0.00	2.269	9.16	1.68	5.6	94.4	0.0	0.09	0.59	0.70	0.69	3.6	0.004	0.89	0.0	0.05	15.16	0.01	2.094	17.35	0.61	8.7	91.3	0.0	-0.83	0.71	0.59	0.71	1.14	6131	771	2	0	0	0	0	logfile
✔	7CU3	30470	2021-12-02	2020-08-20	2.65	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12209	1450	3	0	17	0	0	logfile
✔	6XSS	22305	2021-12-01	2020-07-16	3.7	3.37	—	3.3	0.003	0.63	0.0	0.04	12.31	0.00	1.843	28.34	0.00	2.5	97.5	0.0	-0.32	0.74	0.78	0.04	3.3	0.015	1.65	1.0	0.04	17.18	0.01	2.065	21.16	0.36	1.6	98.4	0.0	2.61	1.33	0.75	0.80	0.22	8048	1040	4	0	0	0	0	logfile
✔	7KAQ	22780	2021-12-02	2020-10-01	4.0	4.57	4.07	4.2	0.003	0.52	0.0	0.04	11.53	0.00	2.158	7.51	0.00	2.3	97.7	0.0	-1.00	0.62	0.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10753	1346	7	0	56	0	0	logfile
✔	7DTC	30850	2021-12-01	2021-01-04	3.3	3.73	—	3.6	0.004	0.68	0.0	0.04	14.07	0.00	2.201	12.17	0.49	7.9	91.6	0.4	-3.34	0.52	0.80	1.81	3.5	0.003	0.77	0.0	0.04	16.13	0.00	2.222	11.22	0.59	8.6	91.4	0.1	0.36	1.35	0.54	0.82	1.30	9363	1151	1	0	9	0	0	logfile
✔	7KAP	22779	2021-12-02	2020-10-01	4.1	4.58	4.09	4.2	0.003	0.55	0.0	0.04	11.24	0.00	2.205	7.95	0.00	2.3	97.7	0.0	-1.05	0.62	0.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10715	1342	7	0	56	0	0	logfile
✔	7KXY	23067	2021-12-01	2020-12-05	4.4	4.55	4.44	4.5	0.004	0.82	0.0	0.05	15.13	0.01	2.197	19.23	7.18	26.0	69.8	4.2	-5.90	0.63	0.60	—	4.5	0.004	0.88	0.0	0.05	14.67	0.01	2.083	26.15	0.00	18.8	81.1	0.1	-4.97	0.60	0.64	0.62	—	9510	1181	2	0	0	0	0	logfile
✔	6M5U	30093	2021-12-02	2020-03-11	3.8	3.78	—	3.8	0.007	0.86	1.0	0.05	16.07	0.00	2.210	18.52	5.59	9.0	90.8	0.2	-3.03	0.62	0.81	1.90	3.8	0.013	1.10	1.0	0.04	16.73	0.01	2.188	12.26	0.55	9.3	90.6	0.1	-0.33	2.21	0.65	0.83	1.81	10549	1359	5	0	5	0	0	logfile
✔	6ZKo	11256	2021-12-02	2020-06-30	3.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	67877	8227	69	0	42	0	0	logfile
✔	7JGF	22325	2021-12-01	2020-07-19	4.69	4.81	—	4.8	0.002	0.62	0.0	0.04	13.16	0.01	2.109	26.51	0.41	4.6	95.4	0.0	-0.87	0.39	0.43	—	4.8	0.002	0.48	0.0	0.04	13.28	0.00	2.151	52.23	0.41	5.2	94.8	0.0	1.10	0.63	0.41	0.45	—	4477	532	1	0	0	0	30	logfile
✔	7L0S	23102	2021-12-01	2020-12-12	4.5	4.35	4.13	4.2	0.008	1.34	2.0	0.08	13.52	0.01	2.107	9.65	1.39	6.0	94.0	0.0	-3.19	0.61	0.63	—	4.2	0.004	0.78	0.0	0.04	13.21	0.00	2.147	19.30	0.00	3.8	96.2	0.0	-0.05	3.56	0.64	0.74	—	7906	1001	5	0	0	0	0	logfile
✔	7DSL	30837	2021-12-01	2020-12-31	2.9	3.28	—	3.2	0.013	1.23	0.0	0.49	15.66	0.01	2.055	6.20	1.14	9.1	90.0	0.9	-3.74	0.70	0.86	2.36	3.3	0.003	1.19	0.0	0.11	15.72	0.00	2.125	7.32	1.90	7.0	92.9	0.1	0.55	0.55	0.69	0.86	2.24	7522	935	8	0	12	8	0	logfile

• ← previous
• Page 2 of 85
• next →