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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DZY | 30921 | 2023-02-22 | 2021-01-26 | 3.6 | 3.83 | 3.38 | 3.1 | 0.020 | 2.12 | 0.0 | 0.00 | 4.32 | 0.01 | 1.980 | 3.14 | 0.00 | 3.7 | 95.4 | 0.9 | -0.42 | 0.43 | 0.27 | — | 3.3 | 0.003 | 0.91 | 0.0 | 0.00 | 5.70 | 0.00 | 2.051 | 3.31 | 0.00 | 15.9 | 83.9 | 0.1 | -2.90 | 2.20 | 0.70 | 0.69 | — | 18708 | 4677 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V0M | 26944 | 2023-02-17 | 2022-05-10 | 2.7 | 2.46 | 2.64 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 18.10 | 0.00 | 2.240 | 3.55 | 1.29 | 3.3 | 96.7 | 0.0 | 0.52 | 0.56 | 0.89 | 4.90 | 2.5 | 0.003 | 0.49 | 0.0 | 0.04 | 18.18 | 0.00 | 2.176 | 4.37 | 2.33 | 3.3 | 96.7 | 0.0 | 1.83 | 0.25 | 0.55 | 0.88 | 4.09 | 3724 | 483 | 4 | 0 | 0 | 60 | 0 | logfile |
✔ | 7Z4E | 14494 | 2023-02-22 | 2022-03-03 | 4.14 | 5.32 | 4.15 | 4.2 | 0.004 | 0.55 | 0.0 | 0.04 | 15.77 | 0.00 | 2.196 | 9.63 | 1.64 | 2.0 | 98.0 | 0.0 | 0.67 | 0.88 | 0.76 | — | 4.3 | 0.004 | 0.61 | 0.0 | 0.04 | 16.22 | 0.00 | 2.159 | 18.25 | 0.00 | 3.5 | 96.5 | 0.0 | 0.86 | 3.44 | 0.90 | 0.81 | — | 14069 | 1357 | 4 | 142 | 0 | 0 | 0 | logfile |
✔ | 6RiU | 4898 | 2023-02-17 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.002 | 0.64 | 0.0 | 0.03 | 15.97 | 0.00 | 2.064 | 12.47 | 0.00 | 3.9 | 96.1 | 0.0 | -0.16 | 1.43 | 0.61 | 0.75 | 0.76 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✔ | 6BX3 | 7303 | 2023-02-19 | 2017-12-16 | 4.3 | 4.71 | — | 4.4 | 0.007 | 1.49 | 0.0 | 0.08 | 12.65 | 0.01 | 1.094 | 24.88 | 0.97 | 18.8 | 81.2 | 0.1 | -5.00 | 0.74 | 0.72 | — | 4.4 | 0.004 | 0.86 | 0.0 | 0.05 | 13.11 | 0.00 | 2.070 | 24.58 | 0.00 | 17.2 | 82.7 | 0.1 | -3.48 | 1.39 | 0.74 | 0.72 | — | 10456 | 1413 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BoZ | 30137 | 2023-02-22 | 2020-03-20 | 3.8 | 3.72 | — | 3.7 | 0.010 | 1.84 | 0.0 | 0.08 | 13.23 | 0.01 | 2.141 | 11.02 | 1.32 | 13.1 | 85.3 | 1.5 | -5.40 | 0.70 | 0.77 | 1.43 | 3.7 | 0.003 | 0.89 | 0.0 | 0.05 | 15.75 | 0.00 | 2.095 | 14.78 | 0.49 | 11.9 | 87.8 | 0.3 | -3.11 | 2.16 | 0.72 | 0.82 | 1.87 | 18516 | 2328 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WTS | 32799 | 2023-02-23 | 2022-02-05 | 3.2 | 3.07 | — | 3.0 | 0.005 | 0.85 | 0.0 | 0.05 | 16.37 | 0.01 | 2.076 | 5.07 | 0.09 | 3.8 | 96.2 | 0.0 | -1.00 | 0.75 | 0.75 | 2.70 | 3.0 | 0.007 | 0.76 | 0.0 | 0.04 | 16.96 | 0.01 | 2.057 | 9.88 | 0.46 | 4.5 | 95.5 | 0.0 | 0.08 | 0.38 | 0.77 | 0.77 | 2.58 | 61945 | 3777 | 23 | 1481 | 0 | 0 | 0 | logfile |
✔ | 8D5C | 27208 | 2023-02-25 | 2022-06-04 | 3.9 | 4.25 | 3.98 | 4.2 | 0.002 | 0.48 | 0.0 | 0.04 | 13.15 | 0.00 | 1.991 | 32.36 | 0.00 | 7.0 | 93.0 | 0.0 | -1.61 | 0.65 | 0.64 | 1.09 | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 14.87 | 0.00 | 1.991 | 38.81 | 0.04 | 10.7 | 89.3 | 0.0 | -1.68 | 1.24 | 0.67 | 0.67 | 1.04 | 26109 | 2730 | 15 | 0 | 0 | 0 | 4739 | logfile |
✔ | 7Z4K | 14500 | 2023-02-21 | 2022-03-04 | 3.81 | 4.83 | 3.89 | 3.9 | 0.003 | 0.44 | 0.0 | 0.03 | 14.82 | 0.00 | 2.200 | 9.44 | 0.99 | 2.4 | 97.6 | 0.0 | 1.12 | 0.85 | 0.75 | 0.54 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 16.91 | 0.00 | 2.146 | 21.08 | 0.25 | 4.4 | 95.6 | 0.0 | 0.02 | 1.90 | 0.88 | 0.80 | 0.62 | 14005 | 1360 | 4 | 138 | 0 | 0 | 0 | logfile |
✔ | 7Z4G | 14496 | 2023-02-20 | 2022-03-03 | 3.64 | 4.65 | 3.78 | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 13.82 | 0.00 | 2.209 | 12.71 | 1.03 | 1.9 | 98.1 | 0.0 | 1.30 | 0.85 | 0.76 | 0.95 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 16.40 | 0.00 | 2.177 | 20.20 | 0.19 | 3.8 | 96.1 | 0.1 | 0.93 | 2.10 | 0.86 | 0.78 | 0.70 | 12714 | 1188 | 4 | 144 | 0 | 0 | 0 | logfile |
✔ | 7oCK | 12809 | 2023-02-26 | 2021-04-27 | 3.6 | 5.02 | — | 8.3 | 0.008 | 0.86 | 0.0 | 0.05 | 14.98 | 0.01 | 1.988 | 36.10 | 0.20 | 7.7 | 92.1 | 0.2 | -2.93 | 0.80 | 0.41 | -0.16 | 5.6 | 0.005 | 0.92 | 0.0 | 0.05 | 16.96 | 0.01 | 2.008 | 39.34 | 0.37 | 7.5 | 92.4 | 0.1 | -1.36 | 1.42 | 0.87 | 0.65 | 0.03 | 28276 | 3666 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CP7 | 7549 | 2023-02-19 | 2018-03-13 | 4.1 | 4.11 | — | 4.1 | 0.008 | 1.42 | 0.0 | 0.07 | 13.16 | 0.01 | 1.577 | 14.52 | 3.98 | 6.6 | 92.9 | 0.5 | -4.99 | 0.50 | 0.68 | — | 4.1 | 0.004 | 0.93 | 0.0 | 0.04 | 12.55 | 0.00 | 2.175 | 18.15 | 0.00 | 5.3 | 94.7 | 0.0 | -0.79 | 1.03 | 0.51 | 0.70 | — | 9164 | 1234 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q3D | 13789 | 2023-02-24 | 2021-10-27 | 3.35 | 4.59 | 3.40 | 3.7 | 0.013 | 1.35 | 0.0 | 0.08 | 11.91 | 0.01 | 2.466 | 1.34 | 0.00 | 1.5 | 98.5 | 0.0 | 0.50 | 0.86 | 0.73 | 0.90 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 14.65 | 0.00 | 2.021 | 11.55 | 0.48 | 3.4 | 96.6 | 0.0 | 0.72 | 2.84 | 0.86 | 0.73 | 0.91 | 22298 | 1391 | 3 | 0 | 0 | 0 | 11249 | logfile |
✔ | 8D44 | 27174 | 2023-02-19 | 2022-06-01 | 2.8 | 3.00 | 2.84 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 16.99 | 0.01 | 2.232 | 6.47 | 1.73 | 5.7 | 94.3 | 0.0 | 0.38 | 0.71 | 0.81 | 3.53 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 17.54 | 0.00 | 2.213 | 8.04 | 1.91 | 5.5 | 94.5 | 0.0 | 1.22 | 1.09 | 0.68 | 0.81 | 3.11 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PQG | 13593 | 2023-02-17 | 2021-09-21 | 3.7 | 4.20 | — | 4.0 | 0.004 | 0.88 | 0.0 | 0.05 | 12.56 | 0.01 | 2.204 | 28.21 | 0.28 | 7.4 | 92.6 | 0.0 | -0.87 | 0.56 | 0.76 | 0.82 | 4.1 | 0.004 | 1.16 | 0.0 | 0.06 | 15.40 | 0.01 | 2.147 | 34.40 | 1.12 | 7.9 | 92.1 | 0.0 | -1.28 | 0.74 | 0.56 | 0.77 | -0.07 | 3251 | 423 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-02-16 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 9.8 | 0.003 | 0.63 | 0.0 | 0.03 | 15.97 | 0.00 | 2.424 | 6.03 | 0.00 | 6.2 | 93.8 | 0.0 | -0.13 | 1.31 | 0.27 | 0.05 | 0.48 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 8CSV | 26972 | 2023-02-17 | 2022-05-13 | 2.7 | 2.53 | 2.72 | 2.6 | 0.002 | 0.47 | 0.0 | 0.04 | 11.85 | 0.00 | 2.246 | 2.73 | 1.03 | 2.7 | 97.1 | 0.2 | 0.82 | 0.53 | 0.85 | 5.33 | 2.6 | 0.003 | 0.53 | 0.0 | 0.04 | 15.82 | 0.00 | 2.175 | 5.19 | 1.03 | 2.9 | 96.9 | 0.2 | 2.04 | 0.72 | 0.57 | 0.88 | 4.86 | 3712 | 483 | 3 | 0 | 0 | 48 | 0 | logfile |
✔ | 7ULW | 26595 | 2023-02-22 | 2022-04-05 | 3.1 | 3.61 | 3.28 | 3.5 | 0.002 | 0.41 | 0.0 | 0.04 | 13.47 | 0.00 | 2.235 | 2.87 | 0.00 | 1.3 | 98.7 | 0.0 | 2.53 | 0.53 | 0.83 | 2.45 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.61 | 0.00 | 2.103 | 7.93 | 0.30 | 2.4 | 97.6 | 0.0 | 1.71 | 0.77 | 0.54 | 0.85 | 2.68 | 18766 | 2400 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VX1 | 32167 | 2023-02-25 | 2021-11-12 | 3.5 | 2.44 | — | 3.4 | 0.002 | 0.49 | 1.0 | 0.04 | 7.46 | 0.00 | 1.753 | 8.22 | 0.00 | 4.3 | 95.7 | 0.1 | -2.11 | 0.63 | 0.59 | 1.22 | 2.1 | 0.003 | 0.65 | 0.0 | 0.04 | 13.20 | 0.00 | 2.098 | 11.64 | 0.11 | 3.0 | 96.9 | 0.0 | -0.65 | 1.38 | 0.66 | 0.64 | 1.34 | 25362 | 3237 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NJ1 | 12369 | 2023-02-20 | 2021-02-14 | 2.9 | 2.23 | — | 1.9 | 0.005 | 0.70 | 1.0 | 0.05 | 13.54 | 0.00 | 2.211 | 9.21 | 1.09 | 7.4 | 92.4 | 0.2 | -2.39 | 0.75 | 0.73 | 2.14 | 1.9 | 0.004 | 0.76 | 0.0 | 0.04 | 16.51 | 0.00 | 2.141 | 11.09 | 1.36 | 6.1 | 93.7 | 0.1 | 0.95 | 0.58 | 0.77 | 0.76 | 1.93 | 11096 | 1501 | 2 | 0 | 0 | 0 | 0 | logfile |