The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DM0 | 27522 | 2023-04-19 | 2022-07-08 | 3.21 | 3.62 | 3.12 | 3.5 | 0.006 | 1.01 | 0.0 | 0.06 | 12.69 | 0.01 | 2.288 | 0.83 | 0.00 | 3.5 | 96.5 | 0.0 | -1.78 | 0.59 | 0.80 | 3.29 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 14.82 | 0.00 | 2.185 | 8.26 | 0.00 | 3.5 | 96.5 | 0.0 | -0.86 | 0.48 | 0.60 | 0.82 | 2.80 | 2480 | 314 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 8DLY | 27520 | 2023-04-19 | 2022-07-08 | 3.0 | 3.63 | 2.92 | 3.6 | 0.005 | 0.94 | 0.0 | 0.06 | 12.37 | 0.01 | 2.317 | 1.86 | 0.37 | 3.5 | 96.5 | 0.0 | -1.46 | 0.63 | 0.81 | 3.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2483 | 314 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2023-04-19 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.85 | 0.0 | 0.04 | 5.41 | 0.00 | 2.334 | 6.19 | 0.00 | 9.6 | 90.4 | 0.0 | -1.73 | 1.59 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MJi | 23874 | 2023-04-19 | 2021-04-20 | 2.81 | 3.32 | — | 3.2 | 0.006 | 0.81 | 0.0 | 0.05 | 12.46 | 0.01 | 2.367 | 2.85 | 0.00 | 2.8 | 97.2 | 0.0 | -0.83 | 0.56 | 0.84 | 4.52 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.08 | 0.00 | 2.315 | 7.94 | 1.47 | 3.2 | 96.8 | 0.0 | 0.06 | 1.05 | 0.57 | 0.85 | 4.44 | 2522 | 320 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8AG3 | 15414 | 2023-04-19 | 2022-07-19 | 3.47 | 2.17 | 3.26 | 2.0 | 0.002 | 0.60 | 0.0 | 0.04 | 17.16 | 0.01 | 2.143 | 8.90 | 0.00 | 6.6 | 93.4 | 0.0 | -1.45 | 0.61 | 0.73 | 3.03 | 2.0 | 0.003 | 0.64 | 0.0 | 0.05 | 17.42 | 0.00 | 2.092 | 9.28 | 1.95 | 7.5 | 92.5 | 0.0 | -1.11 | 0.33 | 0.63 | 0.77 | 2.96 | 2632 | 322 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2023-04-19 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.31 | 0.0 | 0.03 | 15.07 | 0.00 | 2.343 | 5.71 | 0.00 | 0.0 | 100.0 | 0.0 | 5.84 | 0.30 | 0.82 | 0.82 | 2.01 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZS | 24776 | 2023-04-19 | 2021-08-27 | 2.52 | 2.32 | — | 2.1 | 0.005 | 0.46 | 0.0 | 0.03 | 14.73 | 0.00 | 2.273 | 3.04 | 0.00 | 1.0 | 99.0 | 0.0 | 1.98 | 0.77 | 0.79 | 1.82 | 2.0 | 0.003 | 0.42 | 0.0 | 0.04 | 16.16 | 0.00 | 2.327 | 4.66 | 0.35 | 0.0 | 100.0 | 0.0 | 5.95 | 1.19 | 0.79 | 0.82 | 1.19 | 2445 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2023-04-19 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.002 | 0.36 | 0.0 | 0.03 | 15.29 | 0.00 | 2.294 | 4.44 | 0.71 | 0.0 | 100.0 | 0.0 | 6.53 | 0.31 | 0.81 | 0.83 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-04-19 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2023-04-19 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.52 | 0.00 | 2.337 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.26 | 0.24 | 0.80 | 0.83 | 2.93 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7YPQ | 34011 | 2023-04-19 | 2022-08-04 | 3.1 | 3.22 | 2.15 | 3.2 | 0.005 | 0.63 | 0.0 | 0.05 | 17.29 | 0.00 | 2.261 | 7.93 | 0.00 | 2.2 | 97.8 | 0.0 | -0.66 | 0.52 | 0.79 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2915 | 327 | 2 | 11 | 0 | 0 | 0 | logfile |
✔ | 7AWA | 11928 | 2023-04-20 | 2020-11-06 | 3.5 | 3.83 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.22 | 0.00 | 2.126 | 6.77 | 0.00 | 5.8 | 94.2 | 0.0 | -2.52 | 0.57 | 0.81 | 2.14 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.06 | 0.00 | 2.163 | 6.96 | 0.00 | 3.7 | 96.3 | 0.0 | -0.59 | 1.17 | 0.54 | 0.80 | 1.51 | 5310 | 328 | 1 | 0 | 0 | 0 | 2703 | logfile |
✔ | 6YV1 | 10940 | 2023-04-19 | 2020-04-27 | 3.4 | 4.09 | 3.01 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 12.66 | 0.00 | 2.272 | 8.02 | 1.85 | 1.0 | 99.0 | 0.0 | -4.45 | 0.52 | 0.76 | 1.48 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 13.97 | 0.00 | 2.248 | 6.45 | 0.00 | 2.2 | 97.8 | 0.0 | 1.32 | 0.60 | 0.50 | 0.86 | 1.34 | 2496 | 328 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DMB | 27533 | 2023-04-23 | 2022-07-08 | 3.1 | 3.10 | 3.12 | 3.1 | 0.005 | 0.91 | 0.0 | 0.05 | 15.85 | 0.01 | 2.091 | 0.28 | 0.74 | 2.5 | 97.5 | 0.0 | 0.39 | 0.69 | 0.81 | 4.57 | 3.1 | 0.003 | 0.55 | 0.0 | 0.03 | 16.17 | 0.01 | 1.969 | 3.37 | 0.00 | 3.1 | 96.9 | 0.0 | 0.52 | 0.57 | 0.70 | 0.83 | 4.27 | 14225 | 328 | 5 | 275 | 2 | 0 | 5728 | logfile |
✔ | 7RU6 | 24698 | 2023-04-20 | 2021-08-16 | 4.4 | 4.33 | 3.79 | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 15.25 | 0.00 | 2.027 | 10.32 | 0.00 | 0.3 | 99.7 | 0.0 | 3.15 | 0.71 | 0.67 | — | 4.2 | 0.002 | 0.50 | 0.0 | 0.03 | 13.30 | 0.00 | 2.118 | 7.19 | 0.34 | 1.9 | 98.1 | 0.0 | 4.08 | 0.78 | 0.74 | 0.70 | — | 5426 | 331 | 2 | 0 | 0 | 0 | 2725 | logfile |
✔ | 7RUG | 24705 | 2023-04-20 | 2021-08-17 | 4.7 | 5.03 | 4.07 | 4.8 | 0.003 | 0.50 | 0.0 | 0.04 | 12.58 | 0.00 | 1.920 | 12.90 | 0.00 | 1.6 | 98.4 | 0.0 | 3.26 | 0.59 | 0.66 | — | 4.8 | 0.002 | 0.51 | 0.0 | 0.04 | 13.27 | 0.00 | 1.978 | 14.19 | 0.00 | 1.9 | 98.1 | 0.0 | 2.76 | 1.27 | 0.60 | 0.66 | — | 5429 | 331 | 2 | 0 | 0 | 0 | 2728 | logfile |
✔ | 7RZV | 24779 | 2023-04-19 | 2021-08-27 | 2.11 | 2.24 | — | 2.0 | 0.005 | 0.35 | 0.0 | 0.03 | 14.68 | 0.00 | 2.348 | 5.44 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.79 | 0.80 | 2.21 | 2.0 | 0.004 | 0.37 | 0.0 | 0.03 | 15.99 | 0.00 | 2.228 | 4.86 | 0.67 | 0.0 | 100.0 | 0.0 | 5.66 | 0.87 | 0.83 | 0.83 | 1.88 | 2562 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CZi | 27098 | 2023-04-19 | 2022-05-24 | 2.22 | 2.26 | 2.61 | 2.0 | 0.004 | 0.33 | 0.0 | 0.03 | 14.48 | 0.00 | 2.382 | 6.62 | 0.00 | 0.0 | 100.0 | 0.0 | 2.90 | 0.78 | 0.80 | 1.97 | 2.0 | 0.004 | 0.39 | 0.0 | 0.03 | 15.18 | 0.00 | 2.140 | 5.65 | 0.34 | 0.0 | 100.0 | 0.0 | 5.55 | 0.85 | 0.83 | 0.84 | 1.84 | 2550 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TiK | 25912 | 2023-04-19 | 2022-01-13 | 2.4 | 2.38 | — | 2.0 | 0.007 | 0.49 | 0.0 | 0.04 | 16.31 | 0.00 | 2.218 | 7.94 | 0.00 | 4.6 | 95.4 | 0.0 | 1.31 | 0.77 | 0.80 | 1.31 | 2.0 | 0.003 | 0.50 | 0.0 | 0.04 | 16.49 | 0.00 | 2.245 | 8.91 | 1.01 | 0.6 | 99.4 | 0.0 | 5.53 | 0.94 | 0.78 | 0.80 | 1.16 | 2565 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E2J | 27838 | 2023-04-20 | 2022-08-15 | 3.44 | 3.67 | 3.24 | 3.4 | 0.003 | 0.63 | 0.0 | 0.03 | 15.86 | 0.01 | 2.271 | 3.43 | 2.70 | 2.3 | 97.7 | 0.0 | -0.36 | 0.44 | 0.67 | 0.61 | 3.4 | 0.003 | 0.53 | 0.0 | 0.03 | 17.85 | 0.00 | 1.995 | 13.05 | 0.00 | 1.2 | 98.8 | 0.0 | 3.38 | 1.71 | 0.45 | 0.67 | 1.22 | 6012 | 346 | 4 | 0 | 114 | 0 | 2694 | logfile |