The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6YJ5 | 10816 | 2022-05-12 | 2020-04-02 | 3.5 | 2.92 | 3.56 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 13.19 | 0.01 | 2.183 | 4.49 | 0.00 | 12.5 | 87.5 | 0.0 | -5.13 | 0.42 | 0.62 | 3.01 | 3.3 | 0.003 | 0.67 | 0.0 | 0.05 | 15.25 | 0.01 | 2.265 | 8.18 | 0.61 | 8.2 | 91.8 | 0.0 | -1.96 | 0.81 | 0.51 | 0.72 | 2.81 | 2061 | 306 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7C1D | 30269 | 2022-05-12 | 2020-05-03 | 3.8 | 4.18 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.05 | 13.99 | 0.00 | 2.367 | 18.87 | 0.00 | 20.4 | 79.6 | 0.0 | -6.46 | 0.34 | 0.74 | 3.47 | 6.5 | 0.004 | 0.69 | 0.0 | 0.05 | 14.90 | 0.00 | 2.239 | 18.63 | 0.52 | 24.5 | 75.5 | 0.0 | -4.57 | 2.82 | 0.39 | 0.75 | 2.42 | 2034 | 306 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MLU | 9146 | 2022-05-12 | 2018-09-28 | 4.0 | 4.03 | — | 4.0 | 0.005 | 1.05 | 0.0 | 0.06 | 9.86 | 0.01 | 2.406 | 5.97 | 0.69 | 10.6 | 89.4 | 0.0 | -4.38 | 0.40 | 0.78 | — | 4.0 | 0.006 | 1.10 | 0.0 | 0.06 | 18.04 | 0.01 | 2.171 | 32.22 | 2.08 | 13.2 | 86.8 | 0.0 | -2.63 | 3.42 | 0.44 | 0.77 | — | 2516 | 306 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKW | 14055 | 2022-05-12 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.52 | 0.0 | 0.05 | 16.59 | 0.00 | 2.445 | 2.98 | 1.09 | 4.8 | 95.2 | 0.0 | -2.85 | 1.38 | 0.41 | 0.84 | 5.96 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 7N9A | 24253 | 2022-05-12 | 2021-06-17 | 3.5 | 2.68 | — | 2.4 | 0.007 | 1.26 | 0.0 | 0.06 | 12.63 | 0.01 | 2.135 | 19.96 | 0.00 | 2.9 | 97.1 | 0.0 | -0.16 | 0.72 | 0.70 | 2.72 | 2.4 | 0.003 | 0.71 | 0.0 | 0.04 | 15.45 | 0.00 | 2.164 | 13.87 | 0.00 | 2.9 | 97.1 | 0.0 | -1.00 | 0.56 | 0.73 | 0.70 | 1.84 | 2431 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PY2 | 13708 | 2022-05-12 | 2021-10-08 | 2.59 | 2.64 | 1.53 | 2.7 | 0.015 | 1.83 | 0.0 | 0.08 | 17.26 | 0.01 | 2.423 | 1.71 | 2.00 | 9.1 | 90.9 | 0.0 | -5.22 | 0.45 | 0.84 | 6.05 | 2.8 | 0.004 | 0.86 | 0.0 | 0.05 | 18.18 | 0.00 | 2.155 | 2.93 | 4.00 | 5.2 | 94.8 | 0.0 | -3.95 | 1.38 | 0.50 | 0.88 | 5.97 | 2152 | 316 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LXW | 23577 | 2022-05-12 | 2021-03-05 | 2.8 | 3.13 | 2.86 | 3.2 | 0.012 | 1.20 | 0.0 | 0.07 | 10.03 | 0.01 | 2.593 | 0.61 | 0.00 | 1.3 | 98.7 | 0.0 | 0.97 | 0.78 | 0.81 | 5.37 | 3.2 | 0.004 | 0.65 | 0.0 | 0.05 | 15.02 | 0.01 | 2.225 | 10.77 | 1.52 | 1.7 | 98.3 | 0.0 | 0.44 | 1.17 | 0.72 | 0.82 | 5.04 | 2524 | 317 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2022-05-12 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.3 | 0.003 | 0.99 | 0.0 | 0.05 | 15.87 | 0.00 | 2.105 | 21.17 | 0.00 | 22.7 | 77.3 | 0.0 | -4.56 | 2.11 | 0.57 | 0.65 | 3.17 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6PEo | 20328 | 2022-05-12 | 2019-06-20 | 3.3 | 3.52 | — | 3.6 | 0.003 | 0.54 | 0.0 | 0.05 | 13.06 | 0.01 | 2.492 | 10.62 | 0.00 | 9.7 | 90.3 | 0.0 | -1.64 | 0.41 | 0.82 | 3.20 | 3.6 | 0.006 | 0.64 | 0.0 | 0.06 | 15.74 | 0.00 | 2.435 | 9.07 | 0.00 | 8.1 | 91.9 | 0.0 | -2.61 | 1.64 | 0.42 | 0.83 | 4.88 | 2205 | 320 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2022-05-12 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.82 | 0.0 | 0.04 | 4.96 | 0.00 | 2.368 | 4.42 | 0.00 | 8.3 | 91.7 | 0.0 | -1.63 | 1.58 | 0.82 | 0.76 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MJi | 23874 | 2022-05-12 | 2021-04-20 | 2.81 | 3.32 | — | 3.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.43 | 0.01 | 2.367 | 2.85 | 0.00 | 2.8 | 97.2 | 0.0 | -0.83 | 0.56 | 0.84 | 4.52 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 15.25 | 0.00 | 2.300 | 7.73 | 1.10 | 2.8 | 97.2 | 0.0 | -0.01 | 1.44 | 0.56 | 0.85 | 4.21 | 2522 | 320 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6TJo | 10512 | 2022-05-12 | 2019-11-26 | 3.2 | 3.43 | 2.57 | 3.5 | 0.013 | 1.18 | 0.0 | 0.07 | 9.67 | 0.01 | 2.394 | 2.80 | 0.00 | 12.7 | 87.3 | 0.0 | -4.63 | 0.36 | 0.76 | 4.64 | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 13.23 | 0.00 | 2.284 | 10.02 | 0.35 | 11.1 | 88.9 | 0.0 | -3.87 | 1.40 | 0.36 | 0.79 | 3.90 | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VHA | 21201 | 2022-05-12 | 2020-01-09 | 4.3 | 4.35 | — | 7.8 | 0.007 | 1.02 | 0.0 | 0.05 | 15.14 | 0.01 | 2.319 | 26.84 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.55 | 0.54 | — | 4.1 | 0.004 | 0.75 | 0.0 | 0.05 | 13.16 | 0.00 | 2.339 | 14.02 | 0.00 | 9.8 | 90.2 | 0.0 | -4.32 | 3.38 | 0.57 | 0.60 | — | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2022-05-12 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.30 | 0.0 | 0.03 | 15.08 | 0.00 | 2.337 | 5.30 | 0.36 | 0.0 | 100.0 | 0.0 | 5.90 | 0.30 | 0.81 | 0.82 | 1.87 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZS | 24776 | 2022-05-12 | 2021-08-27 | 2.52 | 2.32 | — | 2.1 | 0.005 | 0.46 | 0.0 | 0.03 | 14.73 | 0.00 | 2.273 | 3.04 | 0.00 | 1.0 | 99.0 | 0.0 | 1.98 | 0.77 | 0.79 | 1.82 | 2.0 | 0.003 | 0.43 | 0.0 | 0.04 | 15.95 | 0.00 | 2.318 | 4.66 | 0.71 | 0.0 | 100.0 | 0.0 | 5.82 | 1.18 | 0.78 | 0.81 | 1.27 | 2445 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2022-05-12 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.005 | 0.52 | 0.0 | 0.03 | 15.91 | 0.00 | 2.234 | 8.11 | 1.75 | 0.0 | 100.0 | 0.0 | 4.99 | 0.49 | 0.80 | 0.81 | 1.62 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2022-05-12 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.54 | 0.00 | 2.332 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.21 | 0.24 | 0.80 | 0.82 | 3.03 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2022-05-12 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.003 | 0.35 | 0.0 | 0.03 | 15.28 | 0.00 | 2.325 | 4.84 | 0.35 | 0.0 | 100.0 | 0.0 | 6.56 | 0.32 | 0.81 | 0.82 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6YV1 | 10940 | 2022-05-12 | 2020-04-27 | 3.4 | 4.09 | 3.01 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 12.66 | 0.00 | 2.272 | 8.02 | 1.85 | 1.0 | 99.0 | 0.0 | -4.45 | 0.52 | 0.76 | 1.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2496 | 328 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AWA | 11928 | 2022-05-12 | 2020-11-06 | 3.5 | 3.83 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.22 | 0.00 | 2.126 | 6.77 | 0.00 | 5.8 | 94.2 | 0.0 | -2.52 | 0.57 | 0.81 | 2.14 | 3.6 | 0.002 | 0.53 | 0.0 | 0.04 | 14.89 | 0.00 | 2.160 | 6.39 | 0.00 | 2.8 | 97.2 | 0.0 | -0.31 | 1.17 | 0.54 | 0.80 | 1.47 | 5310 | 328 | 1 | 0 | 0 | 0 | 2703 | logfile |