The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DLY | 27520 | 2022-12-11 | 2022-07-08 | 3.0 | 3.63 | 2.92 | 3.6 | 0.005 | 0.93 | 0.0 | 0.06 | 12.34 | 0.01 | 2.317 | 1.86 | 0.37 | 3.5 | 96.5 | 0.0 | -1.46 | 0.63 | 0.81 | 3.36 | 3.6 | 0.005 | 0.76 | 0.0 | 0.05 | 16.13 | 0.00 | 2.288 | 13.83 | 3.00 | 4.5 | 95.5 | 0.0 | -1.21 | 1.26 | 0.63 | 0.82 | 3.47 | 2483 | 314 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8DM0 | 27522 | 2022-12-11 | 2022-07-08 | 3.21 | 3.62 | 3.12 | 3.5 | 0.006 | 1.00 | 0.0 | 0.06 | 12.66 | 0.01 | 2.288 | 0.83 | 0.00 | 3.5 | 96.5 | 0.0 | -1.78 | 0.59 | 0.80 | 3.29 | 3.6 | 0.004 | 0.67 | 0.0 | 0.05 | 15.20 | 0.00 | 2.120 | 9.92 | 0.37 | 5.2 | 94.8 | 0.0 | -0.99 | 0.47 | 0.60 | 0.82 | 2.44 | 2480 | 314 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7PY2 | 13708 | 2022-12-11 | 2021-10-08 | 2.59 | 2.64 | 1.53 | 2.7 | 0.015 | 1.83 | 0.0 | 0.08 | 17.26 | 0.01 | 2.423 | 1.71 | 2.00 | 9.1 | 90.9 | 0.0 | -5.22 | 0.45 | 0.84 | 6.05 | 2.8 | 0.004 | 0.86 | 0.0 | 0.05 | 18.18 | 0.00 | 2.155 | 2.93 | 4.00 | 5.2 | 94.8 | 0.0 | -3.95 | 1.38 | 0.49 | 0.87 | 5.97 | 2152 | 316 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LXW | 23577 | 2022-12-11 | 2021-03-05 | 2.8 | 3.13 | 2.86 | 3.2 | 0.012 | 1.20 | 0.0 | 0.07 | 10.03 | 0.01 | 2.593 | 0.61 | 0.00 | 1.3 | 98.7 | 0.0 | 0.97 | 0.78 | 0.81 | 5.37 | 3.2 | 0.003 | 0.58 | 0.0 | 0.05 | 15.36 | 0.00 | 2.236 | 9.76 | 1.52 | 1.3 | 98.7 | 0.0 | 0.48 | 1.17 | 0.71 | 0.82 | 5.23 | 2524 | 317 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2022-12-11 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.82 | 0.0 | 0.04 | 4.96 | 0.00 | 2.368 | 4.42 | 0.00 | 8.3 | 91.7 | 0.0 | -1.63 | 1.58 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MJi | 23874 | 2022-12-11 | 2021-04-20 | 2.81 | 3.32 | — | 3.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.43 | 0.01 | 2.367 | 2.85 | 0.00 | 2.8 | 97.2 | 0.0 | -0.83 | 0.56 | 0.84 | 4.52 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 15.25 | 0.00 | 2.300 | 7.73 | 1.10 | 2.8 | 97.2 | 0.0 | -0.01 | 1.44 | 0.57 | 0.85 | 4.21 | 2522 | 320 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6PEo | 20328 | 2022-12-11 | 2019-06-20 | 3.3 | 3.52 | — | 3.6 | 0.003 | 0.54 | 0.0 | 0.05 | 13.06 | 0.01 | 2.492 | 10.62 | 0.00 | 9.7 | 90.3 | 0.0 | -1.64 | 0.41 | 0.82 | 3.20 | 3.6 | 0.006 | 0.64 | 0.0 | 0.06 | 15.74 | 0.00 | 2.435 | 9.07 | 0.00 | 8.1 | 91.9 | 0.0 | -2.61 | 1.64 | 0.42 | 0.83 | 4.88 | 2205 | 320 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2022-12-11 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.3 | 0.003 | 0.99 | 0.0 | 0.05 | 15.87 | 0.00 | 2.105 | 21.17 | 0.00 | 22.7 | 77.3 | 0.0 | -4.56 | 2.11 | 0.57 | 0.65 | 3.17 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6TJo | 10512 | 2022-12-11 | 2019-11-26 | 3.2 | 3.43 | 2.57 | 3.5 | 0.013 | 1.18 | 0.0 | 0.07 | 9.67 | 0.01 | 2.394 | 2.80 | 0.00 | 12.7 | 87.3 | 0.0 | -4.63 | 0.36 | 0.76 | 4.64 | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 13.23 | 0.00 | 2.284 | 10.02 | 0.35 | 11.1 | 88.9 | 0.0 | -3.87 | 1.40 | 0.36 | 0.78 | 3.90 | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VHA | 21201 | 2022-12-11 | 2020-01-09 | 4.3 | 4.35 | — | 7.8 | 0.007 | 1.02 | 0.0 | 0.05 | 15.14 | 0.01 | 2.319 | 26.84 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.55 | 0.54 | — | 4.1 | 0.004 | 0.75 | 0.0 | 0.05 | 13.16 | 0.00 | 2.339 | 14.02 | 0.00 | 9.8 | 90.2 | 0.0 | -4.32 | 3.38 | 0.57 | 0.60 | — | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2022-12-11 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.30 | 0.0 | 0.03 | 15.08 | 0.00 | 2.337 | 5.30 | 0.36 | 0.0 | 100.0 | 0.0 | 5.90 | 0.30 | 0.82 | 0.83 | 1.87 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AG3 | 15414 | 2022-12-11 | 2022-07-19 | 3.47 | 2.17 | 3.26 | 2.0 | 0.002 | 0.60 | 0.0 | 0.04 | 17.16 | 0.01 | 2.143 | 8.90 | 0.00 | 6.6 | 93.4 | 0.0 | -1.45 | 0.61 | 0.73 | 3.03 | 1.8 | 0.003 | 0.60 | 0.0 | 0.04 | 17.21 | 0.01 | 2.117 | 11.17 | 1.30 | 8.5 | 91.5 | 0.0 | -1.16 | 0.41 | 0.63 | 0.77 | 3.15 | 2632 | 322 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2022-12-11 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.003 | 0.35 | 0.0 | 0.03 | 15.28 | 0.00 | 2.325 | 4.84 | 0.35 | 0.0 | 100.0 | 0.0 | 6.56 | 0.32 | 0.81 | 0.83 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2022-12-11 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.54 | 0.00 | 2.332 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.21 | 0.24 | 0.80 | 0.83 | 3.03 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZS | 24776 | 2022-12-11 | 2021-08-27 | 2.52 | 2.32 | — | 2.1 | 0.005 | 0.46 | 0.0 | 0.03 | 14.73 | 0.00 | 2.273 | 3.04 | 0.00 | 1.0 | 99.0 | 0.0 | 1.98 | 0.77 | 0.79 | 1.82 | 2.0 | 0.003 | 0.43 | 0.0 | 0.04 | 15.95 | 0.00 | 2.318 | 4.66 | 0.71 | 0.0 | 100.0 | 0.0 | 5.82 | 1.18 | 0.79 | 0.82 | 1.27 | 2445 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2022-12-11 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.005 | 0.52 | 0.0 | 0.03 | 15.91 | 0.00 | 2.234 | 8.11 | 1.75 | 0.0 | 100.0 | 0.0 | 4.99 | 0.49 | 0.80 | 0.81 | 1.62 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6YV1 | 10940 | 2022-12-18 | 2020-04-27 | 3.4 | 4.09 | 3.01 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 12.66 | 0.00 | 2.272 | 8.02 | 1.85 | 1.0 | 99.0 | 0.0 | -4.45 | 0.52 | 0.76 | 1.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2496 | 328 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AWA | 11928 | 2022-12-11 | 2020-11-06 | 3.5 | 3.83 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.22 | 0.00 | 2.126 | 6.77 | 0.00 | 5.8 | 94.2 | 0.0 | -2.52 | 0.57 | 0.81 | 2.14 | 3.6 | 0.002 | 0.53 | 0.0 | 0.04 | 14.89 | 0.00 | 2.160 | 6.39 | 0.00 | 2.8 | 97.2 | 0.0 | -0.31 | 1.17 | 0.54 | 0.80 | 1.47 | 5310 | 328 | 1 | 0 | 0 | 0 | 2703 | logfile |
✔ | 8DMB | 27533 | 2022-12-13 | 2022-07-08 | 3.1 | 3.10 | 3.12 | 3.1 | 0.005 | 0.91 | 0.0 | 0.05 | 15.85 | 0.01 | 2.091 | 0.35 | 0.74 | 2.5 | 97.5 | 0.0 | 0.39 | 0.69 | 0.81 | 4.57 | 3.1 | 0.004 | 0.59 | 0.0 | 0.04 | 16.37 | 0.01 | 1.941 | 3.30 | 0.00 | 3.7 | 96.3 | 0.0 | 0.24 | 0.57 | 0.70 | 0.83 | 4.47 | 14225 | 328 | 5 | 275 | 2 | 0 | 5728 | logfile |
✔ | 7U0Z | 26268 | 2022-12-11 | 2022-02-19 | 4.2 | 3.55 | — | 4.3 | 0.004 | 0.75 | 0.0 | 0.05 | 11.44 | 0.00 | 2.146 | 13.40 | 0.00 | 1.9 | 98.1 | 0.0 | -2.57 | 0.41 | 0.71 | — | 4.3 | 0.002 | 0.65 | 0.0 | 0.05 | 12.19 | 0.00 | 2.255 | 10.24 | 0.00 | 4.0 | 96.0 | 0.0 | -3.01 | 0.66 | 0.37 | 0.70 | — | 2487 | 330 | 3 | 0 | 0 | 0 | 0 | logfile |