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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PM7 | 13523 | 2023-09-30 | 2021-09-02 | 3.5 | 3.92 | 3.46 | 3.4 | 0.004 | 0.85 | 1.0 | 0.05 | 15.53 | 0.01 | 1.316 | 5.26 | 0.09 | 0.2 | 99.8 | 0.0 | -1.31 | 0.90 | 0.84 | 3.49 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.64 | 0.00 | 1.969 | 8.68 | 0.28 | 1.7 | 98.3 | 0.0 | 1.80 | 2.25 | 0.90 | 0.84 | 2.87 | 10149 | 1260 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7PLY | 13506 | 2023-09-30 | 2021-09-01 | 3.2 | 3.79 | 3.37 | 3.5 | 0.016 | 1.49 | 0.0 | 0.07 | 15.18 | 0.01 | 2.228 | 3.82 | 0.00 | 0.2 | 99.8 | 0.0 | -1.06 | 0.89 | 0.85 | 2.92 | 3.6 | 0.003 | 0.84 | 0.0 | 0.04 | 15.92 | 0.00 | 2.068 | 6.15 | 0.09 | 1.2 | 98.8 | 0.0 | 1.69 | 0.67 | 0.85 | 0.84 | 2.11 | 10149 | 1258 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6GX5 | 0077 | 2023-09-27 | 2018-06-26 | 3.2 | 2.51 | 2.94 | 3.2 | 0.017 | 1.20 | 0.0 | 0.11 | 16.09 | 0.01 | 2.596 | 5.96 | 4.94 | 4.3 | 95.7 | 0.0 | -3.50 | 0.85 | 0.88 | 5.60 | 3.2 | 0.004 | 0.76 | 0.0 | 0.05 | 17.31 | 0.00 | 2.207 | 9.16 | 1.65 | 5.8 | 94.2 | 0.0 | -2.81 | 0.66 | 0.82 | 0.85 | 4.84 | 2133 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F2A | 28810 | 2023-09-30 | 2022-11-07 | 2.2 | 2.40 | 2.32 | 2.5 | 0.004 | 0.60 | 0.0 | 0.05 | 13.84 | 0.00 | 2.188 | 4.68 | 0.76 | 1.7 | 98.3 | 0.0 | -2.70 | 0.65 | 0.84 | 4.09 | 2.5 | 0.003 | 0.59 | 0.0 | 0.04 | 16.15 | 0.00 | 2.174 | 6.56 | 1.42 | 1.7 | 98.3 | 0.0 | 0.60 | 0.52 | 0.64 | 0.84 | 3.72 | 10044 | 1276 | 9 | 0 | 5 | 0 | 0 | logfile |
✔ | 7PMB | 13527 | 2023-09-30 | 2021-09-02 | 3.6 | 4.10 | 3.61 | 3.6 | 0.006 | 0.93 | 1.0 | 0.06 | 15.72 | 0.01 | 1.317 | 6.47 | 0.09 | 0.2 | 99.8 | 0.0 | -1.25 | 0.90 | 0.83 | 2.52 | 3.7 | 0.003 | 0.71 | 0.0 | 0.04 | 16.45 | 0.00 | 1.955 | 8.91 | 0.00 | 2.1 | 97.9 | 0.0 | 1.39 | 1.32 | 0.90 | 0.85 | 2.19 | 10113 | 1255 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 8C6J | 16452 | 2023-09-29 | 2023-01-12 | 2.8 | 3.35 | 2.78 | 2.6 | 0.003 | 0.52 | 1.0 | 0.04 | 13.30 | 0.00 | 1.589 | 7.77 | 0.06 | 2.6 | 97.4 | 0.0 | 1.31 | 0.69 | 0.71 | 3.35 | 2.6 | 0.008 | 0.65 | 0.0 | 0.05 | 14.13 | 0.00 | 1.853 | 9.25 | 1.18 | 3.8 | 96.2 | 0.0 | 1.85 | 0.34 | 0.75 | 0.82 | 3.20 | 111233 | 16794 | 69 | 460 | 18 | 0 | 0 | logfile |
✔ | 8G7L | 29815 | 2023-09-28 | 2023-02-16 | 2.5 | 2.66 | 2.66 | 2.7 | 0.008 | 1.14 | 0.0 | 0.06 | 13.34 | 0.01 | 2.287 | 1.63 | 0.79 | 0.6 | 99.4 | 0.0 | 1.52 | 0.73 | 0.83 | 2.54 | 2.7 | 0.004 | 0.58 | 0.0 | 0.04 | 14.59 | 0.00 | 2.184 | 5.19 | 0.44 | 1.0 | 99.0 | 0.0 | 1.32 | 0.30 | 0.72 | 0.84 | 2.45 | 55510 | 7378 | 28 | 0 | 42 | 0 | 0 | logfile |
✔ | 8H4i | 34478 | 2023-09-28 | 2022-10-10 | 3.06 | 2.31 | 3.09 | 3.0 | 0.012 | 1.04 | 0.0 | 0.06 | 13.70 | 0.01 | 2.147 | 4.38 | 0.00 | 5.3 | 94.7 | 0.0 | -0.34 | 0.77 | 0.83 | 3.22 | 3.0 | 0.004 | 0.65 | 0.0 | 0.04 | 14.95 | 0.00 | 2.104 | 4.25 | 0.00 | 3.9 | 96.1 | 0.0 | 0.37 | 0.31 | 0.78 | 0.85 | 2.18 | 7965 | 1035 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CYV | 27085 | 2023-09-28 | 2022-05-24 | 3.5 | 3.17 | 3.47 | 3.7 | 0.003 | 0.61 | 0.0 | 0.05 | 10.01 | 0.00 | 2.423 | 5.36 | 0.00 | 5.9 | 94.1 | 0.0 | -4.11 | 0.58 | 0.72 | 2.74 | 3.4 | 0.004 | 0.75 | 0.0 | 0.05 | 16.08 | 0.00 | 2.184 | 9.50 | 2.17 | 7.0 | 92.4 | 0.6 | -4.20 | 1.35 | 0.59 | 0.75 | 2.25 | 5964 | 864 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PM8 | 13524 | 2023-09-30 | 2021-09-02 | 3.5 | 3.91 | 3.50 | 3.4 | 0.004 | 0.88 | 1.0 | 0.05 | 15.57 | 0.01 | 1.316 | 6.40 | 0.09 | 0.3 | 99.7 | 0.0 | -1.60 | 0.90 | 0.83 | 2.90 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.94 | 0.00 | 2.001 | 9.62 | 0.28 | 2.2 | 97.8 | 0.0 | 0.90 | 1.30 | 0.91 | 0.85 | 2.61 | 10149 | 1260 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 8AZS | 15770 | 2023-09-29 | 2022-09-06 | 2.9 | 2.78 | 2.55 | 2.8 | 0.011 | 1.50 | 0.0 | 0.12 | 16.09 | 0.01 | 0.017 | 1346.55 | 0.00 | 3.1 | 96.9 | 0.0 | -1.98 | 0.27 | 0.40 | 5.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9036 | 1224 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PMH | 13533 | 2023-09-30 | 2021-09-02 | 3.4 | 4.28 | 3.26 | 3.3 | 0.009 | 1.01 | 2.0 | 0.06 | 14.97 | 0.01 | 1.310 | 4.17 | 0.09 | 0.2 | 99.8 | 0.0 | -1.51 | 0.91 | 0.83 | 3.35 | 3.3 | 0.002 | 0.63 | 0.0 | 0.04 | 15.46 | 0.00 | 2.076 | 7.04 | 0.00 | 1.2 | 98.8 | 0.0 | 1.79 | 1.28 | 0.94 | 0.88 | 2.75 | 10154 | 1259 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7PLW | 13504 | 2023-09-30 | 2021-09-01 | 3.5 | 4.05 | 3.55 | 3.5 | 0.005 | 0.84 | 0.0 | 0.05 | 15.08 | 0.01 | 1.323 | 4.81 | 0.00 | 0.2 | 99.8 | 0.0 | -1.69 | 0.91 | 0.83 | 3.00 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.73 | 0.00 | 1.996 | 8.33 | 0.00 | 1.6 | 98.4 | 0.0 | 1.19 | 1.31 | 0.91 | 0.85 | 2.30 | 10139 | 1263 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PM0 | 13508 | 2023-09-30 | 2021-09-01 | 3.6 | 3.89 | 3.65 | 3.6 | 0.014 | 1.42 | 0.0 | 0.06 | 15.54 | 0.01 | 2.002 | 4.90 | 0.00 | 0.2 | 99.8 | 0.0 | -1.27 | 0.90 | 0.85 | 2.96 | 3.6 | 0.003 | 0.87 | 0.0 | 0.04 | 16.18 | 0.00 | 2.014 | 8.81 | 0.09 | 1.1 | 98.9 | 0.0 | 1.50 | 0.71 | 0.89 | 0.85 | 2.06 | 10169 | 1261 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PMG | 13532 | 2023-09-30 | 2021-09-02 | 3.3 | 4.20 | 3.27 | 3.2 | 0.014 | 1.18 | 2.0 | 0.07 | 15.15 | 0.01 | 1.308 | 4.64 | 0.09 | 0.2 | 99.8 | 0.0 | -1.37 | 0.92 | 0.85 | 3.45 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 15.26 | 0.00 | 1.982 | 6.27 | 0.00 | 1.4 | 98.6 | 0.0 | 1.72 | 1.26 | 0.94 | 0.89 | 2.87 | 10189 | 1264 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7PM3 | 13511 | 2023-09-29 | 2021-09-01 | 3.1 | 3.07 | 3.12 | 3.1 | 0.025 | 2.31 | 0.0 | 0.07 | 17.19 | 0.01 | 2.019 | 5.42 | 0.00 | 0.0 | 100.0 | 0.0 | -0.98 | 0.85 | 0.82 | 3.08 | 3.1 | 0.003 | 1.25 | 0.0 | 0.04 | 16.77 | 0.00 | 2.048 | 9.49 | 0.11 | 1.9 | 98.1 | 0.0 | 1.15 | 1.72 | 0.87 | 0.86 | 2.30 | 8940 | 1113 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7PM2 | 13510 | 2023-09-30 | 2021-09-01 | 3.6 | 3.83 | 3.61 | 3.6 | 0.014 | 1.42 | 0.0 | 0.06 | 16.01 | 0.01 | 2.085 | 4.75 | 0.00 | 0.2 | 99.8 | 0.0 | -1.45 | 0.89 | 0.84 | 2.55 | 3.6 | 0.003 | 0.88 | 0.0 | 0.04 | 16.60 | 0.00 | 1.982 | 8.47 | 0.28 | 1.8 | 98.2 | 0.0 | 1.50 | 1.33 | 0.89 | 0.85 | 2.37 | 10156 | 1259 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 7PMD | 13529 | 2023-09-30 | 2021-09-02 | 2.9 | 4.01 | 2.83 | 3.4 | 0.012 | 1.06 | 1.0 | 0.06 | 14.84 | 0.01 | 1.314 | 3.61 | 0.09 | 0.2 | 99.8 | 0.0 | -1.33 | 0.94 | 0.88 | 3.40 | 3.4 | 0.002 | 0.64 | 0.0 | 0.04 | 15.39 | 0.00 | 2.040 | 6.62 | 0.65 | 1.7 | 98.3 | 0.0 | 1.81 | 1.26 | 0.93 | 0.87 | 3.00 | 10189 | 1264 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 8ADE | 15361 | 2023-09-28 | 2022-07-08 | 2.78 | 2.65 | 2.55 | 2.7 | 0.012 | 1.58 | 0.0 | 0.11 | 9.64 | 0.00 | 2.213 | 3.08 | 0.00 | 3.4 | 96.6 | 0.0 | -4.12 | 0.74 | 0.76 | 3.27 | 3.0 | 0.005 | 0.75 | 0.0 | 0.05 | 15.07 | 0.00 | 2.172 | 13.13 | 1.83 | 2.9 | 97.1 | 0.0 | -2.61 | 0.73 | 0.77 | 0.83 | 4.24 | 5026 | 644 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H66 | 0145 | 2023-09-30 | 2018-07-26 | 4.16 | 4.23 | 3.99 | 4.2 | 0.008 | 0.88 | 0.0 | 0.05 | 9.41 | 0.01 | 2.070 | 15.41 | 0.17 | 10.4 | 89.4 | 0.2 | -3.09 | 0.61 | 0.76 | — | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 12.04 | 0.00 | 2.009 | 24.15 | 0.00 | 8.3 | 91.7 | 0.0 | 0.14 | 1.87 | 0.62 | 0.78 | — | 10017 | 667 | 4 | 30 | 1 | 0 | 4120 | logfile |