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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6Vo1 | 21257 | 2022-04-06 | 2020-01-29 | 3.88 | 4.48 | 3.94 | 4.2 | 0.020 | 1.78 | 0.0 | 0.10 | 10.90 | 0.01 | 2.033 | 2.41 | 0.72 | 4.5 | 94.2 | 1.3 | 0.04 | 0.81 | 0.83 | 2.71 | 4.2 | 0.003 | 0.77 | 0.0 | 0.04 | 13.74 | 0.00 | 2.172 | 13.23 | 0.24 | 5.8 | 93.4 | 0.8 | -0.55 | 1.45 | 0.81 | 0.84 | 2.26 | 19806 | 2382 | 42 | 0 | 87 | 0 | 0 | logfile |
✔ | 6S2E | 10088 | 2022-04-05 | 2019-06-20 | 4.2 | 4.38 | 4.22 | 4.2 | 0.009 | 1.53 | 0.0 | 0.13 | 14.14 | 0.01 | 2.218 | 7.73 | 1.88 | 4.7 | 95.2 | 0.1 | -1.45 | 0.81 | 0.75 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.04 | 13.40 | 0.00 | 2.088 | 18.11 | 0.00 | 4.1 | 95.9 | 0.0 | -0.02 | 1.28 | 0.81 | 0.76 | — | 12459 | 1539 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WBM | 21593 | 2022-04-06 | 2020-03-26 | 2.86 | 3.86 | — | 3.4 | 0.007 | 0.82 | 0.0 | 0.05 | 17.58 | 0.00 | 2.192 | 15.24 | 0.80 | 5.6 | 94.4 | 0.0 | -1.44 | 0.70 | 0.82 | 2.99 | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 15.18 | 0.00 | 2.204 | 10.02 | 2.33 | 3.6 | 96.4 | 0.0 | 1.86 | 0.97 | 0.70 | 0.87 | 2.65 | 19201 | 2387 | 14 | 0 | 42 | 0 | 0 | logfile |
✔ | 6ZTN | 11421 | 2022-04-12 | 2020-07-20 | 3.9 | 3.77 | 3.87 | 3.5 | 0.012 | 1.16 | 0.0 | 0.07 | 16.39 | 0.02 | 0.156 | 8.47 | 5.85 | 6.1 | 93.1 | 0.7 | -2.23 | 0.88 | 0.86 | 1.01 | 3.5 | 0.007 | 0.78 | 1.0 | 0.04 | 16.12 | 0.01 | 0.999 | 18.87 | 0.41 | 5.2 | 94.8 | 0.0 | -0.51 | 0.74 | 0.88 | 0.86 | 0.80 | 174624 | 8895 | 80 | 4872 | 489 | 0 | 0 | logfile |
✔ | 6SZ9 | 10350 | 2022-04-05 | 2019-10-02 | 3.7 | 4.00 | 3.73 | 3.9 | 0.005 | 0.82 | 0.0 | 0.05 | 15.57 | 0.01 | 2.293 | 6.37 | 0.27 | 3.2 | 96.8 | 0.0 | -3.82 | 0.77 | 0.79 | 1.44 | 3.9 | 0.004 | 0.70 | 0.0 | 0.04 | 16.82 | 0.00 | 2.070 | 11.63 | 0.54 | 4.4 | 95.6 | 0.0 | -0.36 | 0.57 | 0.77 | 0.79 | 1.10 | 10233 | 1290 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WEJ | 21649 | 2022-04-06 | 2020-04-02 | 2.6 | 3.13 | — | 3.1 | 0.015 | 1.49 | 16.0 | 0.06 | 15.89 | 0.01 | 2.097 | 8.77 | 2.80 | 4.3 | 95.7 | 0.0 | -2.04 | 0.62 | 0.80 | 3.43 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 15.92 | 0.00 | 2.248 | 9.19 | 1.72 | 3.8 | 96.2 | 0.0 | 1.07 | 1.66 | 0.54 | 0.74 | 2.79 | 17665 | 2052 | 8 | 0 | 33 | 0 | 0 | logfile |
✔ | 6WEL | 21651 | 2022-04-06 | 2020-04-02 | 2.5 | 2.95 | — | 2.9 | 0.011 | 1.09 | 0.0 | 0.06 | 16.36 | 0.01 | 2.111 | 8.33 | 3.02 | 3.9 | 96.1 | 0.0 | -2.07 | 0.54 | 0.76 | 3.96 | 2.9 | 0.004 | 0.57 | 0.0 | 0.04 | 16.77 | 0.00 | 2.185 | 8.14 | 1.62 | 4.0 | 96.0 | 0.0 | 1.01 | 0.50 | 0.56 | 0.78 | 3.74 | 17725 | 2052 | 8 | 0 | 37 | 0 | 0 | logfile |
✔ | 6WEK | 21650 | 2022-04-06 | 2020-04-02 | 2.7 | 3.19 | — | 3.1 | 0.019 | 1.56 | 24.0 | 0.08 | 15.90 | 0.01 | 1.988 | 10.13 | 4.95 | 4.8 | 95.2 | 0.0 | -1.65 | 0.63 | 0.81 | 3.60 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 16.54 | 0.00 | 2.260 | 8.34 | 1.34 | 4.0 | 96.0 | 0.0 | 0.97 | 0.58 | 0.56 | 0.77 | 2.73 | 17616 | 2048 | 8 | 0 | 32 | 0 | 0 | logfile |
✘ | 6VFi | 21173 | 2022-04-04 | 2020-01-05 | 4.54 | 4.63 | 4.96 | 4.5 | 0.018 | 1.47 | 0.0 | 0.09 | 10.93 | 0.01 | 2.449 | 0.53 | 0.00 | 1.3 | 98.7 | 0.0 | 1.21 | 0.80 | 0.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 58488 | 7560 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WSL | 21893 | 2022-04-06 | 2020-05-01 | 3.1 | 3.39 | — | 3.9 | 0.007 | 0.82 | 0.0 | 0.05 | 15.24 | 0.01 | 2.264 | 6.67 | 8.98 | 6.8 | 93.2 | 0.0 | -5.33 | 0.54 | 0.84 | 2.29 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 16.48 | 0.00 | 2.196 | 12.34 | 0.36 | 4.7 | 95.3 | 0.0 | -1.81 | 0.81 | 0.54 | 0.85 | 2.15 | 18204 | 2278 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 6Vo0 | 21256 | 2022-04-06 | 2020-01-29 | 3.52 | 3.99 | — | 3.9 | 0.021 | 1.78 | 0.0 | 0.10 | 10.05 | 0.01 | 2.380 | 1.66 | 0.00 | 3.6 | 95.6 | 0.8 | 0.22 | 0.77 | 0.83 | 2.86 | 3.9 | 0.004 | 0.76 | 0.0 | 0.05 | 14.59 | 0.00 | 2.151 | 11.36 | 0.29 | 6.1 | 93.2 | 0.7 | -0.68 | 1.96 | 0.75 | 0.81 | 1.92 | 19494 | 2364 | 36 | 0 | 72 | 0 | 0 | logfile |
✔ | 6Y50 | 10688 | 2022-04-05 | 2020-02-24 | 4.1 | 4.22 | — | 4.0 | 0.003 | 0.52 | 0.0 | 0.04 | 6.93 | 0.00 | 0.761 | 13.95 | 0.00 | 5.9 | 93.9 | 0.2 | -3.48 | 0.68 | 0.68 | — | 4.0 | 0.004 | 0.67 | 0.0 | 0.05 | 9.54 | 0.00 | 2.003 | 8.73 | 0.00 | 11.0 | 88.9 | 0.1 | -1.71 | 0.52 | 0.71 | 0.73 | — | 14916 | 2537 | 10 | 50 | 3 | 0 | 0 | logfile |
✔ | 6XBD | 22116 | 2022-04-06 | 2020-06-05 | 3.05 | 3.71 | — | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 11.69 | 0.00 | 2.104 | 8.95 | 0.06 | 3.5 | 96.5 | 0.0 | -2.47 | 0.78 | 0.85 | 2.38 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 14.64 | 0.00 | 2.148 | 7.57 | 0.36 | 3.2 | 96.8 | 0.0 | 0.61 | 0.55 | 0.76 | 0.84 | 1.88 | 17433 | 2084 | 15 | 0 | 322 | 0 | 0 | logfile |
✔ | 6Y9A | 10734 | 2022-04-04 | 2020-03-06 | 4.2 | 5.61 | — | 5.7 | 0.004 | 0.81 | 0.0 | 0.05 | 13.59 | 0.01 | 2.211 | 10.90 | 0.00 | 5.9 | 94.1 | 0.0 | -1.17 | 0.53 | 0.44 | — | 5.6 | 0.003 | 0.72 | 0.0 | 0.04 | 13.34 | 0.01 | 2.133 | 17.52 | 0.00 | 5.6 | 94.4 | 0.0 | 0.15 | 1.38 | 0.53 | 0.62 | — | 5948 | 776 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Y5V | 10704 | 2022-04-05 | 2020-02-25 | 4.08 | 4.18 | 4.07 | 4.2 | 0.004 | 0.66 | 0.0 | 0.04 | 11.31 | 0.00 | 2.232 | 7.24 | 0.29 | 4.0 | 96.0 | 0.0 | -2.25 | 0.65 | 0.84 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 12.68 | 0.00 | 2.166 | 10.45 | 0.00 | 4.1 | 95.9 | 0.0 | 0.92 | 2.46 | 0.65 | 0.83 | — | 13400 | 1758 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 6W4S | 21539 | 2022-04-04 | 2020-03-11 | 3.2 | 3.63 | — | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 14.38 | 0.00 | 2.176 | 8.00 | 4.45 | 5.6 | 94.4 | 0.0 | -1.13 | 0.61 | 0.85 | 2.37 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 15.50 | 0.01 | 2.156 | 8.80 | 0.56 | 3.8 | 96.2 | 0.0 | 1.78 | 0.45 | 0.58 | 0.84 | 2.13 | 4986 | 650 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VLR | 21232 | 2022-04-06 | 2020-01-24 | 4.42 | 4.62 | 4.43 | 4.4 | 0.021 | 1.74 | 0.0 | 0.10 | 10.31 | 0.01 | 2.046 | 1.26 | 0.13 | 2.6 | 97.2 | 0.2 | 1.05 | 0.72 | 0.80 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 12.40 | 0.00 | 2.141 | 12.51 | 0.04 | 4.4 | 95.5 | 0.1 | 0.68 | 2.73 | 0.73 | 0.83 | — | 21768 | 2611 | 37 | 0 | 92 | 0 | 0 | logfile |
✔ | 6ZP4 | 11335 | 2022-04-05 | 2020-07-08 | 2.9 | 2.98 | — | 2.6 | 0.007 | 0.92 | 0.0 | 0.05 | 15.90 | 0.01 | 2.079 | 4.89 | 0.33 | 5.3 | 94.7 | 0.1 | -3.82 | 0.84 | 0.81 | 2.89 | 2.6 | 0.006 | 0.73 | 0.0 | 0.04 | 16.49 | 0.00 | 1.875 | 10.80 | 2.22 | 5.4 | 94.5 | 0.0 | -0.48 | 0.45 | 0.84 | 0.81 | 2.56 | 117784 | 10408 | 59 | 1796 | 6 | 0 | 0 | logfile |
✔ | 6SGU | 10185 | 2022-04-10 | 2019-08-05 | 3.27 | 3.39 | 3.20 | 3.3 | 0.005 | 0.72 | 0.0 | 0.04 | 12.69 | 0.00 | 2.197 | 8.74 | 0.22 | 3.9 | 96.0 | 0.0 | -4.40 | 0.67 | 0.76 | 1.67 | 3.3 | 0.005 | 0.75 | 0.0 | 0.04 | 15.48 | 0.00 | 1.676 | 8.78 | 0.07 | 3.2 | 96.8 | 0.0 | -0.82 | 0.91 | 0.70 | 0.84 | 2.68 | 52169 | 3407 | 5 | 0 | 0 | 0 | 26294 | logfile |
✔ | 6VJM | 21219 | 2022-04-05 | 2020-01-16 | 3.97 | 4.44 | — | 4.1 | 0.005 | 0.91 | 0.0 | 0.06 | 14.29 | 0.01 | 2.297 | 6.77 | 0.19 | 8.3 | 91.7 | 0.0 | -4.38 | 0.81 | 0.79 | 1.42 | 4.1 | 0.007 | 0.87 | 0.0 | 0.05 | 15.23 | 0.00 | 2.064 | 20.97 | 0.84 | 10.1 | 89.9 | 0.0 | -1.79 | 1.60 | 0.81 | 0.80 | 1.48 | 10629 | 1369 | 8 | 0 | 11 | 0 | 0 | logfile |