The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8EX4 | 28650 | 2023-08-09 | 2022-10-24 | 2.93 | 3.19 | 2.90 | 3.2 | 0.005 | 0.73 | 0.0 | 0.04 | 13.95 | 0.00 | 2.165 | 9.46 | 0.00 | 1.9 | 98.1 | 0.0 | 0.40 | 0.59 | 0.80 | 4.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3226 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7R43 | 14261 | 2023-08-16 | 2022-02-08 | 2.4 | 2.41 | — | 2.5 | 0.007 | 0.79 | 0.0 | 0.84 | 15.03 | 0.00 | 1.899 | 3.40 | 0.01 | 2.5 | 97.4 | 0.0 | 0.39 | 0.69 | 0.89 | 5.73 | 2.4 | 0.007 | 1.30 | 0.0 | 0.25 | 16.38 | 0.00 | 1.204 | 4.60 | 0.56 | 1.6 | 98.4 | 0.0 | 1.60 | 0.31 | 0.69 | 0.90 | 4.85 | 68334 | 8188 | 109 | 0 | 47 | 885 | 0 | logfile |
✔ | 6VWN | 21422 | 2023-08-23 | 2020-02-20 | 3.4 | 3.71 | — | 3.2 | 0.002 | 0.58 | 0.0 | 0.03 | 14.91 | 0.00 | 1.951 | 7.12 | 3.85 | 4.3 | 95.7 | 0.0 | -3.14 | 0.83 | 0.82 | 1.13 | 3.2 | 0.004 | 0.63 | 0.0 | 0.03 | 16.38 | 0.00 | 1.849 | 16.56 | 0.58 | 6.4 | 93.6 | 0.0 | -1.32 | 1.24 | 0.84 | 0.87 | 1.12 | 140036 | 5341 | 57 | 4580 | 55 | 0 | 0 | logfile |
✔ | 7X1Z | 32953 | 2023-08-17 | 2022-02-25 | 3.3 | 3.65 | 3.29 | 3.5 | 0.003 | 0.76 | 0.0 | 0.05 | 15.42 | 0.00 | 2.095 | 5.74 | 0.53 | 6.4 | 93.4 | 0.2 | -2.63 | 0.82 | 0.84 | 2.74 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 16.56 | 0.00 | 1.935 | 9.46 | 0.16 | 6.6 | 93.3 | 0.1 | -1.31 | 0.40 | 0.80 | 0.86 | 2.95 | 23304 | 2904 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 8GK0 | 40177 | 2023-08-18 | 2023-03-16 | 3.44 | 3.95 | 3.64 | 3.8 | 0.004 | 0.71 | 0.0 | 0.17 | 14.79 | 0.00 | 2.205 | 13.82 | 0.77 | 1.9 | 98.1 | 0.0 | 0.87 | 0.75 | 0.85 | 1.66 | 3.8 | 0.003 | 0.80 | 0.0 | 0.07 | 15.49 | 0.00 | 2.002 | 13.22 | 0.27 | 2.5 | 97.5 | 0.0 | 0.98 | 1.18 | 0.73 | 0.85 | 1.35 | 23882 | 3089 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8oMQ | 16974 | 2023-08-11 | 2023-03-31 | 3.11 | 2.37 | 3.05 | 3.0 | 0.007 | 1.23 | 0.0 | 0.08 | 16.49 | 0.00 | 1.847 | 16.52 | 2.99 | 7.3 | 92.7 | 0.0 | -3.30 | 0.75 | 0.78 | 1.53 | 3.0 | 0.004 | 0.68 | 0.0 | 0.04 | 17.78 | 0.00 | 1.899 | 17.36 | 0.51 | 4.0 | 96.0 | 0.0 | -0.67 | 0.53 | 0.73 | 0.73 | 1.35 | 10584 | 1322 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7QSM | 14134 | 2023-08-17 | 2022-01-13 | 2.3 | 2.31 | — | 2.3 | 0.007 | 0.92 | 0.0 | 0.85 | 15.84 | 0.00 | 1.463 | 2.79 | 0.58 | 2.3 | 97.6 | 0.0 | 0.75 | 0.76 | 0.90 | 6.42 | 2.3 | 0.007 | 1.29 | 0.0 | 0.25 | 16.18 | 0.00 | 1.942 | 4.36 | 0.74 | 1.7 | 98.3 | 0.0 | 1.82 | 0.81 | 0.77 | 0.91 | 5.62 | 71640 | 8262 | 118 | 0 | 62 | 2774 | 0 | logfile |
✔ | 7UGX | 26498 | 2023-08-09 | 2022-03-25 | 2.96 | 3.60 | 2.95 | 3.5 | 0.002 | 0.50 | 0.0 | 0.04 | 10.61 | 0.00 | 2.234 | 3.61 | 0.00 | 1.5 | 98.5 | 0.0 | 1.81 | 0.48 | 0.83 | 2.71 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 13.34 | 0.00 | 2.184 | 6.27 | 0.62 | 2.2 | 97.8 | 0.0 | 2.70 | 0.98 | 0.49 | 0.88 | 1.91 | 3108 | 416 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7UPK | 26668 | 2023-08-14 | 2022-04-15 | 2.8 | 3.03 | 2.80 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 12.65 | 0.00 | 2.156 | 5.84 | 0.06 | 1.7 | 98.3 | 0.0 | -0.01 | 0.70 | 0.81 | 5.07 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.71 | 0.00 | 2.165 | 6.80 | 1.91 | 1.6 | 98.4 | 0.0 | 0.51 | 0.89 | 0.69 | 0.87 | 4.91 | 15276 | 1983 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F7C | 28902 | 2023-08-14 | 2022-11-18 | 3.92 | 4.16 | 3.93 | 4.2 | 0.002 | 0.52 | 0.0 | 0.04 | 13.95 | 0.00 | 1.675 | 4.95 | 0.00 | 3.2 | 96.8 | 0.0 | 0.02 | 0.64 | 0.82 | 2.00 | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 15.82 | 0.00 | 2.139 | 5.01 | 0.48 | 2.8 | 97.2 | 0.0 | 1.25 | 0.40 | 0.66 | 0.82 | 1.78 | 15925 | 2009 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZoL | 11322 | 2023-08-18 | 2020-07-07 | 2.8 | 3.00 | 2.78 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 14.47 | 0.00 | 1.309 | 4.02 | 1.49 | 3.0 | 97.0 | 0.0 | 0.69 | 0.75 | 0.87 | 3.29 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.43 | 0.00 | 1.136 | 5.15 | 2.57 | 3.1 | 96.9 | 0.0 | 0.64 | 3.08 | 0.76 | 0.88 | 2.77 | 25591 | 1944 | 22 | 472 | 59 | 0 | 0 | logfile |
✔ | 7UGD | 26487 | 2023-08-09 | 2022-03-24 | 2.95 | 3.61 | 2.95 | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 11.38 | 0.00 | 2.005 | 2.21 | 0.00 | 0.7 | 99.3 | 0.0 | 0.34 | 0.49 | 0.84 | 3.05 | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 14.29 | 0.00 | 2.225 | 3.80 | 0.31 | 0.2 | 99.8 | 0.0 | 2.52 | 0.45 | 0.49 | 0.85 | 2.12 | 3079 | 415 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7QSN | 14139 | 2023-08-16 | 2022-01-13 | 2.81 | 2.74 | 2.82 | 2.7 | 0.008 | 0.92 | 0.0 | 0.85 | 15.31 | 0.00 | 1.443 | 3.83 | 0.01 | 3.3 | 96.7 | 0.0 | -0.45 | 0.77 | 0.87 | 4.68 | 2.7 | 0.007 | 1.33 | 0.0 | 0.26 | 16.43 | 0.00 | 1.937 | 6.36 | 1.15 | 2.4 | 97.6 | 0.0 | 1.19 | 1.17 | 0.77 | 0.88 | 4.03 | 69320 | 8201 | 116 | 0 | 59 | 1096 | 0 | logfile |
✔ | 7QSK | 14132 | 2023-08-16 | 2022-01-13 | 2.84 | 2.93 | 2.90 | 2.8 | 0.008 | 0.91 | 0.0 | 0.84 | 15.15 | 0.00 | 1.435 | 3.34 | 0.15 | 3.1 | 96.9 | 0.1 | 0.26 | 0.77 | 0.87 | 4.81 | 2.9 | 0.007 | 1.30 | 0.0 | 0.25 | 16.30 | 0.00 | 1.969 | 5.83 | 0.87 | 2.1 | 97.8 | 0.0 | 1.67 | 0.50 | 0.78 | 0.90 | 3.97 | 69987 | 8291 | 116 | 0 | 59 | 1060 | 0 | logfile |
✔ | 7ZK4 | 14754 | 2023-08-11 | 2022-04-12 | 2.6 | 2.81 | 2.63 | 2.9 | 0.006 | 0.86 | 6.0 | 0.05 | 14.14 | 0.00 | 2.008 | 9.40 | 0.10 | 2.3 | 97.7 | 0.0 | 1.26 | 0.69 | 0.84 | 3.61 | 2.9 | 0.003 | 0.54 | 0.0 | 0.04 | 16.67 | 0.00 | 1.933 | 7.75 | 1.26 | 2.4 | 97.5 | 0.1 | 1.75 | 0.50 | 0.60 | 0.84 | 3.19 | 9337 | 1176 | 1 | 0 | 9 | 4 | 0 | logfile |
✔ | 6VWL | 21420 | 2023-08-23 | 2020-02-20 | 3.1 | 3.37 | — | 3.0 | 0.005 | 0.62 | 0.0 | 0.04 | 13.89 | 0.00 | 1.922 | 7.24 | 1.40 | 4.2 | 95.7 | 0.0 | -2.42 | 0.82 | 0.85 | 2.58 | 3.0 | 0.003 | 0.56 | 0.0 | 0.03 | 15.33 | 0.00 | 1.910 | 12.94 | 0.39 | 5.1 | 94.9 | 0.0 | -0.57 | 0.53 | 0.83 | 0.87 | 2.05 | 140603 | 5383 | 58 | 4593 | 34 | 0 | 0 | logfile |
✔ | 7QSo | 14140 | 2023-08-13 | 2022-01-13 | 3.02 | 2.98 | 3.05 | 2.9 | 0.007 | 0.83 | 0.0 | 0.86 | 14.42 | 0.00 | 1.456 | 4.16 | 0.01 | 3.7 | 96.2 | 0.0 | -0.53 | 0.76 | 0.86 | 4.06 | 2.8 | 0.007 | 1.33 | 0.0 | 0.26 | 15.84 | 0.00 | 1.939 | 6.76 | 0.11 | 2.6 | 97.3 | 0.0 | 1.11 | 0.93 | 0.77 | 0.88 | 3.27 | 66113 | 8018 | 68 | 0 | 46 | 0 | 0 | logfile |
✔ | 7XoK | 33350 | 2023-08-09 | 2022-05-01 | 2.7 | 3.82 | 2.75 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 13.15 | 0.00 | 2.160 | 10.61 | 0.00 | 1.1 | 98.9 | 0.0 | 2.23 | 0.87 | 0.86 | 1.97 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 14.79 | 0.00 | 2.108 | 12.44 | 0.34 | 1.0 | 99.0 | 0.0 | 2.10 | 0.30 | 0.87 | 0.86 | 1.75 | 53970 | 7336 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UH3 | 26504 | 2023-08-09 | 2022-03-25 | 2.99 | 3.63 | 2.98 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 10.05 | 0.00 | 1.909 | 4.09 | 0.00 | 2.0 | 98.0 | 0.0 | 0.91 | 0.48 | 0.84 | 2.83 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 13.54 | 0.00 | 2.188 | 8.97 | 1.24 | 2.2 | 97.8 | 0.0 | 1.59 | 1.02 | 0.50 | 0.86 | 1.53 | 3096 | 416 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7XoJ | 33349 | 2023-08-09 | 2022-05-01 | 2.8 | 3.84 | 2.82 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 13.28 | 0.00 | 2.189 | 10.04 | 0.00 | 0.9 | 99.1 | 0.0 | 2.28 | 0.88 | 0.87 | 2.08 | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 14.86 | 0.00 | 2.086 | 12.37 | 0.44 | 1.4 | 98.6 | 0.0 | 2.09 | 0.29 | 0.88 | 0.88 | 1.95 | 53970 | 7336 | 14 | 0 | 0 | 0 | 0 | logfile |