The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6VQ8 | 21319 | 2022-05-13 | 2020-02-04 | 3.9 | 4.52 | — | 4.2 | 0.009 | 0.97 | 0.0 | 0.06 | 10.70 | 0.00 | 2.220 | 3.91 | 0.78 | 2.5 | 97.3 | 0.2 | 0.61 | 0.78 | 0.73 | 1.33 | 4.2 | 0.005 | 0.87 | 0.0 | 0.05 | 14.37 | 0.01 | 2.011 | 21.51 | 0.41 | 4.2 | 95.7 | 0.0 | 0.82 | 2.77 | 0.81 | 0.81 | 1.06 | 60714 | 8451 | 35 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WLB | 21820 | 2022-05-16 | 2020-04-19 | 3.5 | 3.89 | — | 3.8 | 0.004 | 0.56 | 0.0 | 0.06 | 13.08 | 0.00 | 2.123 | 6.89 | 0.16 | 4.2 | 95.8 | 0.0 | 1.33 | 0.66 | 0.78 | 1.05 | 3.8 | 0.003 | 0.57 | 0.0 | 0.06 | 14.48 | 0.01 | 2.021 | 7.18 | 0.21 | 5.5 | 94.5 | 0.0 | 1.30 | 1.20 | 0.64 | 0.79 | 1.68 | 34441 | 2160 | 6 | 0 | 15 | 0 | 16960 | logfile |
✔ | 6MRD | 9196 | 2022-05-16 | 2018-10-12 | 3.82 | 4.44 | — | 3.9 | 0.008 | 0.88 | 0.0 | 0.07 | 10.50 | 0.00 | 1.941 | 43.72 | 0.00 | 9.7 | 90.1 | 0.2 | -2.91 | 0.90 | 0.86 | 1.24 | 3.9 | 0.006 | 0.74 | 1.0 | 0.07 | 11.48 | 0.00 | 1.717 | 64.75 | 0.17 | 10.0 | 89.9 | 0.1 | -0.02 | 0.53 | 0.90 | 0.87 | 1.11 | 34517 | 4396 | 21 | 0 | 14 | 0 | 1477 | logfile |
✔ | 6SKi | 10225 | 2022-05-12 | 2019-08-15 | 2.6 | 2.97 | 2.57 | 2.9 | 0.004 | 0.72 | 0.0 | 0.04 | 16.20 | 0.00 | 2.210 | 8.64 | 1.29 | 1.6 | 98.4 | 0.0 | -0.80 | 0.63 | 0.83 | 4.83 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 16.67 | 0.00 | 2.267 | 7.50 | 1.94 | 3.1 | 96.9 | 0.0 | 0.90 | 0.51 | 0.63 | 0.84 | 4.48 | 4434 | 569 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XCM | 22127 | 2022-05-15 | 2020-06-08 | 3.42 | 3.84 | — | 3.6 | 0.008 | 0.73 | 0.0 | 0.05 | 15.64 | 0.00 | 2.068 | 15.56 | 8.41 | 11.6 | 88.3 | 0.1 | -4.31 | 0.79 | 0.85 | 2.08 | 3.6 | 0.004 | 0.65 | 0.0 | 0.04 | 15.76 | 0.00 | 2.095 | 11.77 | 0.46 | 6.7 | 93.2 | 0.0 | -1.66 | 0.48 | 0.77 | 0.86 | 1.93 | 26772 | 3390 | 23 | 0 | 59 | 0 | 0 | logfile |
✔ | 6XCN | 22128 | 2022-05-16 | 2020-06-08 | 3.66 | 3.89 | — | 3.7 | 0.011 | 0.90 | 0.0 | 0.05 | 14.05 | 0.00 | 2.117 | 15.11 | 1.08 | 10.2 | 89.8 | 0.0 | -4.10 | 0.78 | 0.87 | 2.22 | 3.7 | 0.005 | 0.76 | 0.0 | 0.04 | 15.08 | 0.00 | 2.053 | 9.90 | 0.07 | 5.3 | 94.7 | 0.0 | -1.13 | 0.99 | 0.77 | 0.86 | 1.63 | 28662 | 3636 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 6XTX | 10619 | 2022-05-17 | 2020-01-16 | 3.29 | 3.53 | 3.30 | 3.4 | 0.009 | 0.79 | 0.0 | 0.05 | 14.41 | 0.00 | 2.008 | 10.52 | 0.11 | 10.9 | 89.1 | 0.0 | -5.12 | 0.81 | 0.85 | 2.25 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 15.87 | 0.00 | 1.929 | 8.14 | 0.31 | 5.8 | 94.2 | 0.0 | -1.83 | 1.61 | 0.81 | 0.85 | 1.70 | 40834 | 5058 | 18 | 11 | 13 | 0 | 0 | logfile |
✔ | 6oQW | 20172 | 2022-05-17 | 2019-04-29 | 3.1 | 3.49 | — | 3.3 | 0.005 | 0.82 | 5.0 | 0.05 | 14.42 | 0.00 | 1.924 | 4.66 | 1.75 | 3.3 | 96.6 | 0.1 | -2.30 | 0.77 | 0.83 | 2.57 | 3.3 | 0.004 | 0.69 | 0.0 | 0.04 | 15.87 | 0.00 | 1.933 | 8.53 | 0.24 | 3.4 | 96.6 | 0.0 | 0.72 | 0.78 | 0.79 | 0.89 | 2.54 | 36901 | 4847 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6SK0 | 10219 | 2022-05-12 | 2019-08-14 | 2.3 | 2.30 | 2.11 | 2.2 | 0.008 | 0.74 | 0.0 | 0.05 | 15.85 | 0.00 | 2.202 | 9.23 | 0.97 | 3.3 | 96.7 | 0.0 | -1.30 | 0.70 | 0.83 | 6.89 | 2.2 | 0.005 | 0.72 | 0.0 | 0.05 | 17.22 | 0.00 | 2.164 | 10.52 | 0.65 | 4.5 | 95.5 | 0.0 | -1.28 | 1.50 | 0.80 | 0.90 | 6.82 | 5826 | 792 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PQV | 20454 | 2022-05-17 | 2019-07-10 | 3.3 | 3.54 | — | 3.4 | 0.009 | 0.93 | 1.0 | 0.05 | 14.70 | 0.00 | 1.757 | 4.51 | 2.58 | 3.6 | 96.3 | 0.0 | -2.75 | 0.75 | 0.86 | 3.27 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 15.86 | 0.00 | 1.963 | 8.90 | 0.39 | 2.4 | 97.6 | 0.0 | 0.52 | 1.29 | 0.77 | 0.88 | 2.55 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6oQR | 20167 | 2022-05-17 | 2019-04-29 | 3.1 | 3.49 | — | 3.3 | 0.010 | 0.90 | 3.0 | 0.05 | 14.75 | 0.00 | 1.753 | 4.66 | 2.50 | 3.5 | 96.5 | 0.0 | -2.47 | 0.77 | 0.86 | 3.56 | 3.3 | 0.003 | 0.69 | 0.0 | 0.04 | 15.90 | 0.00 | 1.967 | 8.61 | 0.23 | 2.9 | 97.1 | 0.0 | 0.53 | 1.27 | 0.79 | 0.89 | 2.47 | 36951 | 4849 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6oQV | 20171 | 2022-05-17 | 2019-04-29 | 3.3 | 3.60 | — | 3.4 | 0.010 | 0.94 | 1.0 | 0.05 | 14.75 | 0.00 | 1.740 | 5.27 | 2.95 | 4.1 | 95.9 | 0.0 | -2.77 | 0.76 | 0.85 | 3.07 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 15.69 | 0.00 | 1.933 | 8.23 | 0.23 | 2.7 | 97.3 | 0.0 | 0.90 | 1.99 | 0.79 | 0.88 | 2.33 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6KPK | 0749 | 2022-05-13 | 2019-08-15 | 2.3 | 3.44 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.06 | 12.55 | 0.00 | 2.127 | 4.93 | 0.37 | 5.5 | 94.5 | 0.0 | -3.66 | 0.84 | 0.88 | 4.21 | 3.2 | 0.003 | 0.72 | 1.0 | 0.13 | 14.45 | 0.00 | 2.010 | 5.11 | 0.62 | 3.6 | 96.4 | 0.0 | 1.15 | 0.76 | 0.84 | 0.89 | 4.11 | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✔ | 6oQU | 20170 | 2022-05-17 | 2019-04-29 | 3.2 | 3.50 | — | 3.3 | 0.009 | 0.93 | 2.0 | 0.05 | 14.95 | 0.00 | 1.718 | 4.70 | 2.92 | 3.5 | 96.5 | 0.0 | -2.70 | 0.75 | 0.86 | 3.08 | 3.3 | 0.005 | 0.72 | 0.0 | 0.04 | 15.80 | 0.01 | 1.860 | 8.70 | 0.39 | 2.8 | 97.2 | 0.0 | 0.51 | 0.66 | 0.78 | 0.89 | 2.35 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6VoA | 21259 | 2022-05-15 | 2020-01-30 | 4.0 | 4.24 | — | 4.1 | 0.004 | 0.83 | 8.0 | 0.06 | 14.09 | 0.00 | 1.107 | 13.97 | 1.57 | 8.8 | 90.7 | 0.5 | -3.28 | 0.69 | 0.58 | — | 4.1 | 0.007 | 0.80 | 0.0 | 0.04 | 16.17 | 0.00 | 2.188 | 14.25 | 0.67 | 7.9 | 92.1 | 0.1 | -1.17 | 2.40 | 0.77 | 0.69 | — | 26824 | 3958 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oQS | 20168 | 2022-05-17 | 2019-04-29 | 3.3 | 3.55 | — | 3.4 | 0.008 | 0.85 | 0.0 | 0.05 | 14.37 | 0.00 | 1.849 | 5.70 | 1.80 | 2.5 | 97.5 | 0.0 | -2.20 | 0.76 | 0.86 | 3.40 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.90 | 0.00 | 1.977 | 8.82 | 0.23 | 2.5 | 97.5 | 0.0 | 0.61 | 1.67 | 0.78 | 0.89 | 2.45 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6oQT | 20169 | 2022-05-17 | 2019-04-29 | 3.1 | 3.48 | — | 3.3 | 0.008 | 0.86 | 1.0 | 0.05 | 14.36 | 0.00 | 1.781 | 3.86 | 1.96 | 2.9 | 97.1 | 0.0 | -2.11 | 0.78 | 0.88 | 3.44 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 15.72 | 0.00 | 1.967 | 7.01 | 0.34 | 2.4 | 97.6 | 0.0 | 0.89 | 1.24 | 0.79 | 0.89 | 2.51 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 6KQK | 0753 | 2022-05-13 | 2019-08-18 | 2.17 | 3.14 | — | 2.8 | 0.018 | 1.15 | 12.0 | 0.06 | 15.47 | 0.00 | 1.876 | 11.30 | 0.00 | 7.4 | 92.6 | 0.0 | -4.38 | 0.82 | 0.84 | 4.45 | 2.8 | 0.004 | 0.73 | 4.0 | 0.12 | 16.21 | 0.00 | 1.757 | 9.64 | 0.72 | 4.4 | 95.6 | 0.0 | 0.10 | 0.80 | 0.82 | 0.86 | 4.10 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 6WU3 | 21904 | 2022-05-13 | 2020-05-04 | 3.16 | 3.62 | 3.40 | 3.5 | 0.008 | 0.60 | 0.0 | 0.04 | 15.89 | 0.00 | 2.057 | 9.10 | 6.27 | 8.4 | 91.6 | 0.0 | -3.62 | 0.61 | 0.85 | 2.96 | 3.6 | 0.004 | 0.58 | 0.0 | 0.03 | 15.93 | 0.00 | 2.035 | 8.73 | 0.57 | 6.0 | 94.0 | 0.0 | 1.00 | 1.85 | 0.60 | 0.87 | 2.53 | 13610 | 890 | 2 | 0 | 0 | 0 | 6936 | logfile |
✔ | 6WU2 | 21903 | 2022-05-14 | 2020-05-04 | 3.36 | 3.76 | 3.55 | 3.7 | 0.010 | 0.77 | 0.0 | 0.05 | 14.78 | 0.00 | 2.074 | 6.99 | 0.76 | 7.8 | 92.0 | 0.2 | -3.14 | 0.61 | 0.86 | 3.65 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 15.83 | 0.00 | 2.021 | 7.89 | 0.00 | 6.2 | 93.6 | 0.2 | 0.82 | 0.62 | 0.60 | 0.87 | 2.81 | 15404 | 978 | 4 | 0 | 10 | 0 | 7812 | logfile |