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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6VRS | 21371 | 2024-03-15 | 2020-02-09 | 2.7 | 3.22 | — | 2.9 | 0.008 | 1.49 | 5.0 | 0.11 | 14.48 | 0.01 | 2.012 | 2.39 | 1.82 | 3.1 | 96.6 | 0.3 | -0.31 | 0.95 | 0.92 | 6.32 | 2.9 | 0.002 | 0.46 | 0.0 | 0.04 | 15.04 | 0.00 | 2.120 | 6.00 | 0.00 | 2.1 | 97.9 | 0.0 | 2.31 | 1.01 | 0.93 | 0.90 | 4.29 | 12208 | 1548 | 12 | 0 | 8 | 16 | 0 | logfile |
✔ | 7oRK | 13040 | 2024-03-17 | 2021-06-06 | 3.1 | 3.05 | — | 3.1 | 0.007 | 0.79 | 2.0 | 0.05 | 14.71 | 0.00 | 1.996 | 5.31 | 1.04 | 3.2 | 96.8 | 0.0 | 0.32 | 0.83 | 0.89 | 4.27 | 3.1 | 0.003 | 0.46 | 0.0 | 0.04 | 15.59 | 0.00 | 1.973 | 5.63 | 0.99 | 2.7 | 97.3 | 0.0 | 0.97 | 0.72 | 0.84 | 0.91 | 4.06 | 18699 | 2182 | 7 | 36 | 5 | 48 | 0 | logfile |
✔ | 8A05 | 15048 | 2024-03-10 | 2022-05-26 | 3.4 | 3.47 | 3.11 | 3.5 | 0.002 | 0.43 | 0.0 | 0.05 | 12.67 | 0.00 | 2.328 | 2.02 | 0.00 | 2.2 | 97.8 | 0.0 | 0.42 | 0.37 | 0.84 | 2.71 | 3.5 | 0.002 | 0.46 | 0.0 | 0.05 | 14.84 | 0.00 | 2.255 | 2.02 | 2.41 | 2.2 | 97.8 | 0.0 | 0.36 | 0.20 | 0.36 | 0.85 | 2.71 | 764 | 91 | 2 | 0 | 5 | 0 | 0 | logfile |
✔ | 7RQX | 24639 | 2024-03-21 | 2021-08-08 | 3.36 | 3.59 | — | 3.5 | 0.012 | 1.06 | 0.0 | 0.06 | 19.02 | 0.01 | 2.227 | 8.03 | 0.00 | 3.4 | 96.6 | 0.0 | -0.29 | 0.67 | 0.75 | 2.39 | 3.5 | 0.002 | 0.46 | 0.0 | 0.03 | 16.04 | 0.00 | 2.042 | 7.71 | 1.34 | 3.9 | 96.1 | 0.0 | 0.92 | 0.48 | 0.67 | 0.80 | 2.25 | 30450 | 2016 | 8 | 0 | 26 | 0 | 14344 | logfile |
✔ | 8BHB | 16051 | 2024-03-20 | 2022-10-30 | 2.54 | 3.17 | 2.64 | 3.0 | 0.003 | 0.42 | 0.0 | 0.04 | 7.20 | 0.02 | 2.149 | 2.09 | 0.00 | 0.9 | 99.1 | 0.0 | 2.13 | 0.73 | 0.88 | 5.71 | 3.0 | 0.003 | 0.46 | 0.0 | 0.04 | 12.74 | 0.00 | 2.272 | 2.35 | 1.34 | 2.3 | 97.7 | 0.0 | 2.27 | 0.65 | 0.72 | 0.88 | 5.11 | 27250 | 1680 | 15 | 0 | 10 | 65 | 13415 | logfile |
✔ | 7RJT | 24490 | 2024-03-21 | 2021-07-21 | 2.93 | 3.41 | — | 3.3 | 0.005 | 0.59 | 0.0 | 0.04 | 14.15 | 0.00 | 2.251 | 4.92 | 0.00 | 2.6 | 97.4 | 0.0 | 0.61 | 0.75 | 0.80 | 2.98 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 15.01 | 0.00 | 2.292 | 4.35 | 0.98 | 2.3 | 97.7 | 0.0 | 0.89 | 0.34 | 0.76 | 0.82 | 2.61 | 28972 | 3608 | 12 | 0 | 28 | 24 | 0 | logfile |
✔ | 7RQU | 24636 | 2024-03-23 | 2021-08-08 | 3.05 | 3.32 | — | 3.3 | 0.012 | 1.15 | 0.0 | 0.06 | 22.09 | 0.00 | 2.334 | 3.79 | 0.00 | 3.2 | 96.8 | 0.0 | 1.69 | 0.63 | 0.76 | 2.73 | 3.3 | 0.003 | 0.46 | 0.0 | 0.03 | 15.88 | 0.00 | 2.362 | 3.22 | 1.38 | 3.7 | 96.3 | 0.0 | 1.91 | 0.28 | 0.64 | 0.80 | 2.64 | 35602 | 2416 | 8 | 0 | 38 | 0 | 16568 | logfile |
✔ | 7STL | 25432 | 2024-03-20 | 2021-11-14 | 2.95 | 3.30 | — | 3.2 | 0.004 | 0.75 | 0.0 | 0.04 | 11.53 | 0.00 | 2.190 | 0.38 | 0.15 | 2.3 | 97.7 | 0.0 | 1.82 | 0.67 | 0.82 | 3.24 | 3.2 | 0.003 | 0.46 | 0.0 | 0.04 | 14.18 | 0.00 | 2.088 | 2.80 | 0.66 | 3.5 | 96.4 | 0.1 | 1.76 | 0.54 | 0.66 | 0.84 | 3.12 | 25668 | 1600 | 4 | 0 | 8 | 0 | 12568 | logfile |
✔ | 7RQW | 24638 | 2024-03-22 | 2021-08-08 | 3.11 | 3.40 | — | 3.5 | 0.011 | 0.99 | 0.0 | 0.06 | 17.95 | 0.00 | 2.042 | 7.24 | 0.00 | 4.4 | 95.6 | 0.0 | 0.31 | 0.55 | 0.69 | 2.95 | 3.5 | 0.003 | 0.46 | 0.0 | 0.03 | 16.96 | 0.00 | 1.949 | 7.74 | 1.50 | 3.6 | 96.4 | 0.0 | 1.03 | 0.37 | 0.51 | 0.68 | 2.77 | 32984 | 2128 | 8 | 0 | 20 | 0 | 15804 | logfile |
✔ | 8io9 | 35612 | 2024-03-16 | 2023-03-10 | 2.36 | 3.18 | 2.44 | 2.8 | 0.005 | 0.60 | 0.0 | 0.04 | 12.12 | 0.00 | 1.987 | 8.65 | 0.48 | 3.5 | 96.5 | 0.0 | 0.34 | 0.86 | 0.84 | 4.54 | 2.8 | 0.002 | 0.46 | 0.0 | 0.04 | 12.41 | 0.00 | 2.007 | 7.83 | 0.73 | 3.0 | 97.0 | 0.0 | 0.84 | 0.28 | 0.86 | 0.84 | 3.63 | 75744 | 9456 | 24 | 0 | 36 | 0 | 0 | logfile |
✔ | 7P13 | 13154 | 2024-03-16 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | 1.6 | 0.002 | 0.46 | 0.0 | 0.03 | 17.13 | 0.00 | 2.108 | 15.11 | 1.52 | 2.4 | 97.6 | 0.0 | 5.18 | 0.51 | 0.83 | 0.87 | 3.53 | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7MQH | 23947 | 2024-03-19 | 2021-05-05 | 3.1 | 3.00 | 3.04 | 3.2 | 0.007 | 0.81 | 0.0 | 0.06 | 13.71 | 0.00 | 2.350 | 2.29 | 0.00 | 1.0 | 99.0 | 0.0 | 0.95 | 0.79 | 0.86 | 5.69 | 3.2 | 0.002 | 0.46 | 0.0 | 0.04 | 14.65 | 0.00 | 2.330 | 3.50 | 0.74 | 2.8 | 97.2 | 0.0 | 0.97 | 0.34 | 0.81 | 0.88 | 5.93 | 12736 | 1640 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7ZXo | 15012 | 2024-03-17 | 2022-05-21 | 2.5 | 2.89 | 2.54 | 2.7 | 0.003 | 0.52 | 0.0 | 0.04 | 15.39 | 0.01 | 2.216 | 2.71 | 1.36 | 0.0 | 100.0 | 0.0 | 4.19 | 0.72 | 0.88 | 3.47 | 2.7 | 0.002 | 0.46 | 0.0 | 0.04 | 16.02 | 0.00 | 2.309 | 3.01 | 1.52 | 1.0 | 99.0 | 0.0 | 4.56 | 0.62 | 0.65 | 0.91 | 3.03 | 17016 | 2124 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RXH | 24731 | 2024-03-10 | 2021-08-23 | 2.3 | 3.07 | — | 2.8 | 0.009 | 1.40 | 0.0 | 0.05 | 24.73 | 0.00 | 2.211 | 13.92 | 0.56 | 2.7 | 97.1 | 0.2 | -0.87 | 0.63 | 0.78 | 3.25 | 2.8 | 0.003 | 0.46 | 0.0 | 0.04 | 17.02 | 0.00 | 1.955 | 15.81 | 0.93 | 3.2 | 96.8 | 0.0 | 2.20 | 1.67 | 0.60 | 0.90 | 3.81 | 5631 | 626 | 1 | 0 | 18 | 24 | 48 | logfile |
✔ | 7PDS | 13342 | 2024-03-19 | 2021-08-06 | 3.14 | 2.94 | 3.06 | 3.1 | 0.005 | 0.68 | 0.0 | 0.05 | 15.19 | 0.00 | 1.818 | 8.20 | 0.25 | 4.3 | 95.7 | 0.0 | -0.79 | 0.73 | 0.86 | 3.97 | 3.0 | 0.002 | 0.46 | 0.0 | 0.04 | 16.33 | 0.00 | 1.966 | 8.78 | 1.63 | 3.1 | 96.9 | 0.0 | -0.32 | 0.90 | 0.75 | 0.88 | 3.62 | 22549 | 2714 | 13 | 5 | 10 | 0 | 0 | logfile |
✔ | 8QHP | 18415 | 2024-03-11 | 2023-09-08 | 2.8 | 3.49 | 2.82 | 3.3 | 0.002 | 0.38 | 0.0 | 0.04 | 11.64 | 0.00 | 2.176 | 6.09 | 0.00 | 1.0 | 99.0 | 0.0 | 1.77 | 0.76 | 0.86 | 4.14 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 14.74 | 0.00 | 2.182 | 7.06 | 0.98 | 1.2 | 98.8 | 0.0 | 2.54 | 0.85 | 0.74 | 0.84 | 3.33 | 6788 | 820 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SFJ | 25079 | 2024-03-11 | 2021-10-04 | 2.74 | 3.33 | — | 3.4 | 0.007 | 0.94 | 0.0 | 0.04 | 18.49 | 0.01 | 2.308 | 3.87 | 1.28 | 2.5 | 97.5 | 0.0 | 2.20 | 0.62 | 0.78 | 3.51 | 3.4 | 0.002 | 0.46 | 0.0 | 0.04 | 17.54 | 0.00 | 2.271 | 5.09 | 2.14 | 3.4 | 96.6 | 0.0 | 2.47 | 0.47 | 0.57 | 0.76 | 2.96 | 7377 | 852 | 9 | 0 | 24 | 3 | 0 | logfile |
✔ | 8PSS | 17861 | 2024-03-17 | 2023-07-13 | 2.83 | 2.94 | 2.75 | 2.9 | 0.002 | 0.44 | 0.0 | 0.03 | 18.02 | 0.00 | 1.778 | 3.66 | 1.29 | 2.4 | 97.5 | 0.1 | 1.49 | 0.79 | 0.90 | 3.63 | 2.8 | 0.003 | 0.46 | 0.0 | 0.04 | 17.69 | 0.00 | 1.841 | 3.83 | 2.15 | 2.4 | 97.6 | 0.0 | 1.46 | 0.30 | 0.78 | 0.90 | 3.72 | 17722 | 1071 | 7 | 29 | 2 | 0 | 8690 | logfile |
✔ | 7ooA | 13008 | 2024-03-16 | 2021-05-27 | 2.7 | 2.63 | 2.63 | 2.6 | 0.005 | 0.66 | 0.0 | 0.05 | 21.92 | 0.00 | 2.256 | 5.81 | 0.00 | 0.4 | 99.6 | 0.0 | 2.71 | 0.71 | 0.86 | 4.30 | 2.6 | 0.003 | 0.46 | 0.0 | 0.04 | 15.74 | 0.00 | 2.229 | 5.71 | 1.48 | 1.2 | 98.8 | 0.0 | 1.75 | 1.12 | 0.71 | 0.88 | 4.00 | 15610 | 1834 | 14 | 0 | 35 | 0 | 0 | logfile |
✔ | 8J9Z | 36120 | 2024-03-15 | 2023-05-05 | 3.13 | 3.40 | 3.17 | 3.4 | 0.002 | 0.41 | 0.0 | 0.04 | 16.68 | 0.00 | 2.177 | 4.52 | 0.15 | 2.2 | 97.8 | 0.0 | 1.31 | 0.68 | 0.81 | 3.00 | 3.4 | 0.003 | 0.46 | 0.0 | 0.04 | 17.10 | 0.00 | 2.140 | 5.30 | 2.60 | 1.8 | 98.2 | 0.0 | 1.02 | 0.27 | 0.72 | 0.85 | 2.88 | 12154 | 1494 | 2 | 0 | 0 | 0 | 0 | logfile |