The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XKQ | 33264 | 2023-08-18 | 2022-04-20 | 3.3 | 3.61 | 3.27 | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 13.48 | 0.00 | 1.967 | 4.96 | 0.00 | 2.0 | 98.0 | 0.0 | 1.22 | 0.86 | 0.89 | 2.81 | 3.3 | 0.002 | 0.48 | 0.0 | 0.04 | 14.84 | 0.00 | 1.983 | 6.06 | 0.11 | 2.2 | 97.8 | 0.0 | 1.46 | 0.40 | 0.87 | 0.91 | 2.38 | 25299 | 3259 | 15 | 0 | 13 | 0 | 0 | logfile |
✔ | 8EHR | 28150 | 2023-08-10 | 2022-09-14 | 3.2 | 2.95 | 3.03 | 3.1 | 0.003 | 0.55 | 0.0 | 0.05 | 13.08 | 0.00 | 2.374 | 2.29 | 0.00 | 0.0 | 100.0 | 0.0 | 1.82 | 0.58 | 0.85 | 3.24 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.23 | 0.00 | 2.320 | 4.65 | 0.37 | 0.9 | 99.1 | 0.0 | 1.26 | 1.17 | 0.58 | 0.87 | 3.27 | 7350 | 1022 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oRN | 13043 | 2023-08-13 | 2021-06-06 | 2.8 | 2.83 | — | 2.8 | 0.004 | 0.59 | 1.0 | 0.04 | 12.58 | 0.00 | 1.978 | 4.09 | 0.19 | 2.1 | 97.9 | 0.0 | 1.14 | 0.82 | 0.89 | 4.23 | 2.8 | 0.003 | 0.48 | 0.0 | 0.04 | 15.17 | 0.00 | 1.981 | 5.36 | 0.76 | 2.5 | 97.5 | 0.0 | 1.27 | 0.36 | 0.78 | 0.91 | 3.88 | 14811 | 1700 | 6 | 35 | 3 | 92 | 0 | logfile |
✔ | 7SFJ | 25079 | 2023-08-10 | 2021-10-04 | 2.74 | 3.33 | — | 3.4 | 0.007 | 0.94 | 0.0 | 0.04 | 18.41 | 0.01 | 2.308 | 3.87 | 1.28 | 2.5 | 97.5 | 0.0 | 2.20 | 0.62 | 0.78 | 3.51 | 3.4 | 0.002 | 0.48 | 0.0 | 0.04 | 17.67 | 0.00 | 2.281 | 5.23 | 1.85 | 3.2 | 96.8 | 0.0 | 2.36 | 0.47 | 0.58 | 0.77 | 2.97 | 7377 | 852 | 9 | 0 | 24 | 3 | 0 | logfile |
✔ | 7XNV | 33327 | 2023-08-15 | 2022-04-29 | 3.4 | 3.18 | 3.11 | 3.2 | 0.005 | 1.07 | 0.0 | 0.05 | 16.87 | 0.00 | 2.213 | 7.73 | 0.90 | 1.0 | 98.4 | 0.6 | 0.24 | 0.69 | 0.85 | 2.90 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 16.78 | 0.00 | 2.243 | 5.32 | 0.21 | 1.1 | 98.9 | 0.0 | 2.46 | 0.40 | 0.70 | 0.88 | 2.37 | 18378 | 2088 | 24 | 0 | 114 | 0 | 0 | logfile |
✔ | 8GS2 | 34218 | 2023-08-14 | 2022-09-04 | 2.84 | 3.09 | 2.94 | 3.1 | 0.002 | 0.42 | 0.0 | 0.04 | 10.20 | 0.00 | 1.579 | 4.49 | 0.30 | 1.2 | 98.8 | 0.0 | 1.18 | 0.74 | 0.89 | 4.67 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.09 | 0.00 | 2.185 | 6.70 | 1.56 | 1.7 | 98.3 | 0.0 | 1.43 | 1.32 | 0.74 | 0.90 | 4.14 | 16935 | 1916 | 7 | 64 | 4 | 0 | 0 | logfile |
✔ | 8G9F | 29864 | 2023-08-24 | 2023-02-21 | 3.2 | 3.77 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.257 | 2.77 | 0.00 | 3.1 | 96.9 | 0.0 | 0.34 | 0.89 | 0.83 | 3.53 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 15.99 | 0.00 | 2.029 | 3.81 | 0.05 | 2.6 | 97.4 | 0.0 | 1.72 | 2.00 | 0.90 | 0.87 | 3.33 | 37540 | 2321 | 7 | 0 | 4 | 0 | 18758 | logfile |
✔ | 8E28 | 27828 | 2023-08-09 | 2022-08-14 | 3.1 | 3.26 | 3.15 | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 16.45 | 0.01 | 2.316 | 3.83 | 0.00 | 1.5 | 98.5 | 0.0 | -1.72 | 0.75 | 0.85 | 3.17 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 17.09 | 0.00 | 2.204 | 5.32 | 0.49 | 1.5 | 98.5 | 0.0 | 0.26 | 0.73 | 0.76 | 0.87 | 2.64 | 5789 | 690 | 2 | 15 | 0 | 0 | 0 | logfile |
✔ | 7XKi | 33254 | 2023-08-22 | 2022-04-19 | 3.4 | 3.86 | 3.39 | 3.8 | 0.002 | 0.41 | 0.0 | 0.04 | 13.46 | 0.00 | 2.299 | 1.34 | 0.00 | 2.5 | 97.5 | 0.0 | 5.17 | 0.60 | 0.76 | 2.60 | 3.8 | 0.003 | 0.48 | 0.0 | 0.04 | 14.62 | 0.00 | 2.187 | 4.18 | 0.06 | 2.8 | 97.2 | 0.0 | 4.42 | 1.10 | 0.54 | 0.76 | 2.54 | 32280 | 1992 | 24 | 0 | 48 | 0 | 15996 | logfile |
✔ | 7NKD | 12438 | 2023-08-11 | 2021-02-17 | 3.12 | 3.57 | — | 3.2 | 0.003 | 0.45 | 0.0 | 0.04 | 14.50 | 0.00 | 2.134 | 6.59 | 0.00 | 1.7 | 98.3 | 0.0 | 2.45 | 0.85 | 0.81 | 2.57 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 15.43 | 0.00 | 2.128 | 7.12 | 0.00 | 1.5 | 98.5 | 0.0 | 3.15 | 0.91 | 0.85 | 0.83 | 2.19 | 9555 | 643 | 8 | 0 | 0 | 0 | 4768 | logfile |
✔ | 8DBG | 27283 | 2023-08-13 | 2022-06-14 | 2.2 | 2.20 | 2.25 | 2.2 | 0.007 | 0.69 | 0.0 | 0.05 | 15.18 | 0.00 | 1.958 | 4.92 | 1.97 | 3.4 | 96.6 | 0.0 | 0.54 | 0.71 | 0.86 | 6.29 | 2.2 | 0.002 | 0.48 | 0.0 | 0.05 | 16.08 | 0.00 | 1.996 | 5.40 | 2.23 | 3.3 | 96.7 | 0.0 | 1.17 | 0.31 | 0.74 | 0.90 | 5.48 | 14442 | 1854 | 18 | 0 | 30 | 12 | 0 | logfile |
✔ | 7RHH | 24461 | 2023-08-13 | 2021-07-17 | 3.31 | 3.03 | — | 3.0 | 0.012 | 0.65 | 0.0 | 0.05 | 13.02 | 0.00 | 2.231 | 5.58 | 0.06 | 2.2 | 97.8 | 0.0 | 0.69 | 0.68 | 0.84 | 2.48 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 14.33 | 0.00 | 2.191 | 9.27 | 0.06 | 2.1 | 97.9 | 0.0 | 1.55 | 0.38 | 0.69 | 0.87 | 2.40 | 14717 | 1784 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8F7B | 28901 | 2023-08-14 | 2022-11-18 | 3.15 | 3.53 | 3.17 | 3.5 | 0.005 | 0.79 | 0.0 | 0.04 | 17.29 | 0.00 | 2.263 | 5.78 | 0.23 | 2.4 | 97.6 | 0.0 | 1.06 | 0.63 | 0.79 | 2.19 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.28 | 0.00 | 2.227 | 7.36 | 0.34 | 2.1 | 97.9 | 0.0 | 2.15 | 1.13 | 0.59 | 0.79 | 2.11 | 16166 | 1894 | 18 | 0 | 17 | 6 | 0 | logfile |
✔ | 7MQF | 23945 | 2023-08-17 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.01 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.43 | 0.00 | 2.255 | 2.60 | 0.00 | 1.0 | 99.0 | 0.0 | 1.00 | 0.44 | 0.78 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 8BVQ | 16268 | 2023-08-18 | 2022-12-05 | 3.3 | 3.33 | 3.29 | 3.5 | 0.004 | 0.55 | 0.0 | 0.04 | 16.05 | 0.00 | 2.088 | 7.55 | 0.31 | 4.1 | 95.9 | 0.0 | -0.42 | 0.54 | 0.73 | 1.75 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.24 | 0.00 | 2.051 | 7.03 | 0.39 | 5.0 | 95.0 | 0.0 | -0.40 | 0.28 | 0.60 | 0.81 | 1.87 | 23125 | 1518 | 6 | 0 | 0 | 0 | 11250 | logfile |
✔ | 7XDE | 33145 | 2023-08-15 | 2022-03-26 | 2.72 | 3.00 | 2.86 | 3.1 | 0.011 | 0.82 | 0.0 | 0.05 | 13.03 | 0.00 | 2.110 | 8.62 | 0.63 | 1.2 | 98.8 | 0.0 | 0.38 | 0.68 | 0.81 | 3.27 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 15.72 | 0.00 | 2.132 | 8.20 | 1.42 | 1.6 | 98.4 | 0.0 | 0.92 | 1.11 | 0.64 | 0.80 | 2.93 | 17896 | 2248 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7ZH4 | 14721 | 2023-08-09 | 2022-04-05 | 2.49 | 2.65 | 2.46 | 2.6 | 0.005 | 0.88 | 0.0 | 0.04 | 14.07 | 0.00 | 2.231 | 4.63 | 0.00 | 2.3 | 97.7 | 0.0 | -0.97 | 0.56 | 0.86 | 4.93 | 2.6 | 0.002 | 0.48 | 0.0 | 0.04 | 16.92 | 0.00 | 2.240 | 5.14 | 1.51 | 1.4 | 98.6 | 0.0 | 1.08 | 2.14 | 0.52 | 0.85 | 3.74 | 2957 | 362 | 4 | 0 | 2 | 39 | 0 | logfile |
✔ | 7K0N | 22604 | 2023-08-15 | 2020-09-04 | 3.1 | 3.55 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 13.94 | 0.00 | 2.227 | 6.22 | 0.32 | 2.5 | 97.5 | 0.0 | 0.72 | 0.73 | 0.82 | 2.88 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 15.30 | 0.00 | 2.253 | 5.17 | 0.05 | 2.0 | 98.0 | 0.0 | 1.15 | 1.06 | 0.72 | 0.84 | 2.63 | 18470 | 2340 | 14 | 0 | 18 | 0 | 0 | logfile |
✔ | 6U6i | 20666 | 2023-08-21 | 2019-08-29 | 3.12 | 3.43 | — | 3.4 | 0.006 | 0.49 | 0.0 | 0.07 | 11.32 | 0.00 | 2.029 | 6.12 | 0.00 | 7.6 | 92.4 | 0.0 | -3.59 | 0.80 | 0.80 | 4.39 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.01 | 0.00 | 2.097 | 5.71 | 0.00 | 5.0 | 95.0 | 0.0 | -0.04 | 0.51 | 0.81 | 0.83 | 4.17 | 21701 | 1496 | 9 | 0 | 11 | 0 | 10337 | logfile |
✔ | 7PXH | 13703 | 2023-08-20 | 2021-10-08 | 2.59 | 3.11 | 2.60 | 3.0 | 0.006 | 0.79 | 0.0 | 0.04 | 13.60 | 0.00 | 2.079 | 4.27 | 0.45 | 1.8 | 98.2 | 0.0 | 0.70 | 0.77 | 0.87 | 3.60 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 15.06 | 0.00 | 2.187 | 5.38 | 1.58 | 2.1 | 97.9 | 0.0 | 1.21 | 0.43 | 0.77 | 0.90 | 3.69 | 28922 | 3540 | 8 | 0 | 39 | 0 | 0 | logfile |