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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LH2 | 23334 | 2023-11-15 | 2021-01-21 | 3.43 | 4.01 | — | 3.9 | 0.003 | 0.56 | 0.0 | 0.04 | 13.18 | 0.00 | 2.030 | 7.06 | 0.18 | 2.7 | 97.3 | 0.0 | 0.96 | 0.66 | 0.82 | 1.96 | 3.9 | 0.002 | 0.58 | 0.0 | 0.04 | 14.82 | 0.00 | 2.194 | 7.15 | 0.35 | 2.8 | 97.2 | 0.0 | 1.50 | 0.79 | 0.68 | 0.86 | 2.24 | 10528 | 1360 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6TY9 | 20582 | 2023-11-16 | 2019-08-08 | 2.9 | 2.98 | — | 2.9 | 0.009 | 0.72 | 0.0 | 0.04 | 14.66 | 0.00 | 1.980 | 5.88 | 0.20 | 3.6 | 96.4 | 0.0 | -4.19 | 0.60 | 0.88 | 4.04 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 16.40 | 0.00 | 2.015 | 5.53 | 2.42 | 2.6 | 97.4 | 0.0 | 0.30 | 0.50 | 0.56 | 0.89 | 3.19 | 14559 | 1709 | 6 | 38 | 5 | 0 | 0 | logfile |
✔ | 6UZY | 20964 | 2023-11-16 | 2019-11-15 | 3.38 | 3.52 | — | 3.5 | 0.012 | 1.10 | 7.0 | 0.07 | 15.17 | 0.01 | 2.265 | 6.91 | 0.00 | 2.6 | 97.4 | 0.0 | -3.44 | 0.66 | 0.82 | 2.53 | 3.5 | 0.002 | 0.49 | 0.0 | 0.04 | 15.47 | 0.00 | 2.300 | 5.77 | 0.00 | 2.2 | 97.8 | 0.0 | 1.87 | 0.33 | 0.61 | 0.81 | 1.85 | 16212 | 1946 | 14 | 0 | 21 | 0 | 0 | logfile |
✔ | 6TY8 | 20581 | 2023-11-16 | 2019-08-08 | 3.0 | 3.11 | — | 3.1 | 0.008 | 0.99 | 1.0 | 0.06 | 9.80 | 0.01 | 2.210 | 4.88 | 0.75 | 3.0 | 96.9 | 0.1 | -3.24 | 0.57 | 0.86 | 3.98 | 3.1 | 0.002 | 0.54 | 0.0 | 0.04 | 15.93 | 0.00 | 2.102 | 4.84 | 2.44 | 1.8 | 98.2 | 0.0 | 0.38 | 1.69 | 0.58 | 0.89 | 3.22 | 13607 | 1694 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7PN1 | 13545 | 2023-11-15 | 2021-09-04 | 3.9 | 4.15 | 3.83 | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 12.95 | 0.00 | 2.053 | 6.26 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.61 | 0.80 | 1.17 | 4.0 | 0.002 | 0.54 | 0.0 | 0.04 | 14.49 | 0.00 | 1.939 | 7.42 | 0.18 | 2.6 | 97.4 | 0.0 | 1.52 | 0.97 | 0.60 | 0.80 | 0.75 | 10384 | 657 | 1 | 0 | 0 | 0 | 5237 | logfile |
✔ | 7JGF | 22325 | 2023-11-13 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.74 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.47 | 0.0 | 0.04 | 13.18 | 0.00 | 2.190 | 46.28 | 0.41 | 4.8 | 95.2 | 0.0 | 1.10 | 0.62 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 7ZRG | 14913 | 2023-11-15 | 2022-05-04 | 3.5 | 3.19 | 3.44 | 3.3 | 0.004 | 0.78 | 0.0 | 0.05 | 16.02 | 0.01 | 2.291 | 6.53 | 0.00 | 4.5 | 95.5 | 0.0 | -1.09 | 0.64 | 0.80 | 1.65 | 3.3 | 0.002 | 0.54 | 0.0 | 0.04 | 16.36 | 0.00 | 2.155 | 10.27 | 0.18 | 3.8 | 96.2 | 0.0 | 0.49 | 0.29 | 0.64 | 0.82 | 1.40 | 11032 | 1448 | 6 | 0 | 10 | 0 | 0 | logfile |
✔ | 7T38 | 25651 | 2023-11-17 | 2021-12-07 | 3.8 | 4.03 | — | 4.0 | 0.004 | 0.78 | 0.0 | 0.04 | 13.60 | 0.01 | 2.319 | 4.19 | 0.39 | 3.1 | 96.9 | 0.0 | -1.24 | 0.68 | 0.81 | 1.54 | 4.0 | 0.002 | 0.55 | 0.0 | 0.04 | 15.45 | 0.00 | 2.262 | 6.56 | 0.44 | 4.0 | 96.0 | 0.0 | 1.62 | 1.56 | 0.70 | 0.83 | 1.38 | 19404 | 2432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZGo | 14709 | 2023-11-14 | 2022-04-04 | 2.55 | 2.04 | 2.53 | 2.6 | 0.008 | 1.24 | 0.0 | 0.06 | 16.84 | 0.00 | 2.170 | 9.40 | 0.00 | 3.4 | 96.6 | 0.0 | 1.35 | 0.50 | 0.76 | 3.14 | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 16.48 | 0.00 | 2.254 | 8.96 | 0.52 | 3.1 | 96.9 | 0.0 | 2.18 | 1.09 | 0.53 | 0.79 | 3.51 | 7754 | 940 | 6 | 0 | 21 | 24 | 0 | logfile |
✔ | 7MQR | 23950 | 2023-11-16 | 2021-05-06 | 4.1 | 4.43 | 4.11 | 4.2 | 0.007 | 1.32 | 0.0 | 0.07 | 14.72 | 0.01 | 2.382 | 3.72 | 0.60 | 9.7 | 89.9 | 0.3 | -3.42 | 0.85 | 0.80 | — | 4.2 | 0.002 | 0.63 | 0.0 | 0.04 | 13.96 | 0.00 | 2.239 | 9.80 | 0.00 | 7.1 | 92.7 | 0.2 | -1.15 | 0.47 | 0.85 | 0.82 | — | 14878 | 1810 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 7WE4 | 32439 | 2023-11-14 | 2021-12-22 | 2.7 | 3.09 | — | 3.1 | 0.012 | 1.59 | 4.0 | 0.09 | 16.97 | 0.02 | 2.238 | 17.86 | 0.31 | 5.3 | 94.2 | 0.5 | -0.28 | 0.67 | 0.81 | 2.61 | 3.1 | 0.002 | 0.60 | 0.0 | 0.04 | 16.57 | 0.00 | 2.187 | 6.90 | 0.61 | 3.8 | 96.2 | 0.0 | 1.69 | 2.23 | 0.60 | 0.82 | 2.47 | 9806 | 1122 | 4 | 0 | 29 | 0 | 0 | logfile |
✔ | 7XBD | 33103 | 2023-11-14 | 2022-03-21 | 3.11 | 3.35 | 3.12 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 14.05 | 0.00 | 2.201 | 6.38 | 0.00 | 4.8 | 95.2 | 0.0 | -1.80 | 0.61 | 0.73 | 2.27 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 15.91 | 0.00 | 2.176 | 6.72 | 0.31 | 4.2 | 95.8 | 0.0 | -0.61 | 0.37 | 0.58 | 0.73 | 1.79 | 8981 | 1153 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UZV | 26919 | 2023-11-14 | 2022-05-09 | 2.5 | 2.29 | 2.44 | 2.3 | 0.003 | 0.58 | 0.0 | 0.04 | 19.05 | 0.00 | 1.944 | 3.69 | 2.84 | 1.4 | 98.3 | 0.3 | 1.78 | 0.62 | 0.84 | 3.61 | 2.3 | 0.002 | 0.54 | 0.0 | 0.04 | 19.13 | 0.00 | 1.943 | 5.32 | 3.25 | 1.6 | 98.3 | 0.2 | 1.37 | 0.25 | 0.61 | 0.85 | 3.77 | 9274 | 584 | 4 | 0 | 0 | 63 | 4592 | logfile |
✔ | 7RJT | 24490 | 2023-11-20 | 2021-07-21 | 2.93 | 3.41 | — | 3.3 | 0.005 | 0.59 | 0.0 | 0.04 | 14.12 | 0.00 | 2.251 | 4.92 | 0.00 | 2.6 | 97.4 | 0.0 | 0.61 | 0.75 | 0.80 | 2.98 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 15.10 | 0.00 | 2.288 | 4.90 | 0.83 | 2.3 | 97.7 | 0.0 | 0.75 | 0.34 | 0.77 | 0.83 | 2.50 | 28972 | 3608 | 12 | 0 | 28 | 24 | 0 | logfile |
✔ | 7S8o | 24899 | 2023-11-14 | 2021-09-18 | 2.58 | 2.12 | 2.59 | 1.9 | 0.007 | 0.72 | 0.0 | 0.05 | 13.18 | 0.00 | 2.102 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | 0.31 | 0.81 | 0.80 | 4.50 | 1.9 | 0.002 | 0.53 | 0.0 | 0.04 | 15.63 | 0.00 | 2.207 | 3.18 | 0.92 | 4.4 | 95.6 | 0.0 | 1.05 | 0.40 | 0.83 | 0.83 | 3.24 | 8331 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UPi | 26667 | 2023-11-14 | 2022-04-15 | 2.89 | 3.71 | 2.90 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 9.09 | 0.00 | 1.843 | 2.56 | 0.00 | 1.9 | 98.1 | 0.0 | -0.12 | 0.91 | 0.87 | 3.97 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.006 | 4.22 | 0.11 | 2.1 | 97.9 | 0.0 | -0.22 | 2.21 | 0.90 | 0.89 | 3.98 | 7775 | 972 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 5A6F | 3063 | 2023-11-14 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.9 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.048 | 8.96 | 0.00 | 4.7 | 95.3 | 0.0 | -0.78 | 0.97 | 0.57 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✔ | 6o2o | 0610 | 2023-11-18 | 2019-02-24 | 4.53 | 4.47 | — | 4.3 | 0.006 | 1.00 | 1.0 | 0.06 | 14.75 | 0.01 | 2.191 | 7.84 | 0.42 | 11.2 | 88.8 | 0.0 | -4.31 | 0.78 | 0.80 | — | 4.3 | 0.002 | 0.64 | 0.0 | 0.04 | 13.58 | 0.00 | 2.049 | 11.13 | 0.02 | 8.7 | 91.3 | 0.0 | -2.58 | 0.59 | 0.77 | 0.79 | — | 72637 | 9218 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WiT | 32535 | 2023-11-14 | 2022-01-04 | 3.21 | 3.87 | 3.47 | 3.8 | 0.005 | 0.57 | 0.0 | 0.04 | 10.80 | 0.00 | 2.271 | 4.78 | 3.11 | 3.3 | 96.7 | 0.0 | -0.91 | 0.61 | 0.77 | 2.46 | 3.8 | 0.002 | 0.51 | 0.0 | 0.04 | 13.61 | 0.00 | 2.200 | 4.97 | 0.68 | 1.9 | 98.1 | 0.0 | 1.83 | 0.65 | 0.61 | 0.79 | 1.39 | 8109 | 1133 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7XQ9 | 33391 | 2023-11-17 | 2022-05-07 | 3.3 | 3.62 | 3.55 | 3.8 | 0.005 | 0.83 | 0.0 | 0.06 | 14.70 | 0.01 | 2.253 | 1.72 | 3.89 | 3.6 | 96.4 | 0.0 | -2.05 | 0.52 | 0.82 | 2.74 | 3.8 | 0.002 | 0.51 | 0.0 | 0.03 | 15.61 | 0.00 | 2.205 | 4.12 | 0.14 | 2.2 | 97.8 | 0.0 | 3.52 | 0.53 | 0.54 | 0.83 | 2.53 | 19632 | 2412 | 12 | 0 | 0 | 0 | 0 | logfile |