The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6VVo | 21405 | 2022-04-07 | 2020-02-18 | 3.4 | 3.45 | — | 3.3 | 0.008 | 0.82 | 0.0 | 0.05 | 14.00 | 0.00 | 1.915 | 9.84 | 0.41 | 4.7 | 95.2 | 0.1 | -2.93 | 0.89 | 0.86 | 2.75 | 3.3 | 0.002 | 0.54 | 0.0 | 0.04 | 15.19 | 0.00 | 1.979 | 7.03 | 0.27 | 3.1 | 96.9 | 0.0 | 0.71 | 1.15 | 0.90 | 0.88 | 2.49 | 19668 | 2493 | 13 | 0 | 9 | 0 | 0 | logfile |
✔ | 6RTC | 4997 | 2022-04-06 | 2019-05-23 | 3.96 | 4.05 | 3.97 | 4.0 | 0.007 | 0.91 | 0.0 | 0.05 | 14.96 | 0.01 | 2.295 | 1.19 | 0.00 | 3.9 | 96.1 | 0.0 | -3.83 | 0.68 | 0.80 | 1.58 | 4.0 | 0.002 | 0.58 | 0.0 | 0.04 | 16.14 | 0.00 | 2.258 | 6.56 | 0.10 | 4.6 | 95.4 | 0.0 | 0.77 | 0.62 | 0.68 | 0.81 | 1.63 | 19374 | 1242 | 2 | 0 | 0 | 0 | 9804 | logfile |
✔ | 6PoS | 20418 | 2022-04-04 | 2019-07-05 | 4.12 | 4.39 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 11.58 | 0.01 | 2.116 | 2.48 | 0.00 | 0.1 | 99.9 | 0.0 | -2.43 | 0.80 | 0.77 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 13.02 | 0.00 | 1.917 | 9.09 | 0.03 | 2.9 | 97.1 | 0.0 | 0.18 | 1.02 | 0.82 | 0.80 | — | 53503 | 3425 | 20 | 0 | 13 | 0 | 26853 | logfile |
✔ | 6DMR | 7965 | 2022-04-06 | 2018-06-05 | 3.9 | 4.25 | — | 4.2 | 0.005 | 0.91 | 0.0 | 0.05 | 10.34 | 0.01 | 2.280 | 3.54 | 0.00 | 4.2 | 95.8 | 0.0 | -4.22 | 0.62 | 0.70 | 1.82 | 4.1 | 0.002 | 0.62 | 0.0 | 0.04 | 14.97 | 0.00 | 2.278 | 6.37 | 0.10 | 3.1 | 96.9 | 0.0 | -0.45 | 1.74 | 0.75 | 0.87 | 1.48 | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DMW | 7967 | 2022-04-06 | 2018-06-05 | 4.4 | 4.49 | — | 4.4 | 0.006 | 1.02 | 0.0 | 0.05 | 11.36 | 0.01 | 2.253 | 6.61 | 0.18 | 4.0 | 96.0 | 0.0 | -3.38 | 0.59 | 0.66 | — | 4.4 | 0.002 | 0.68 | 0.0 | 0.04 | 13.04 | 0.00 | 2.175 | 8.26 | 0.00 | 2.7 | 97.3 | 0.0 | 0.60 | 0.94 | 0.71 | 0.84 | — | 20546 | 2562 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6iFK | 9653 | 2022-04-06 | 2018-09-20 | 3.2 | 3.32 | — | 3.3 | 0.009 | 1.20 | 1.0 | 0.06 | 12.74 | 0.01 | 2.046 | 6.33 | 1.01 | 10.7 | 89.0 | 0.3 | -4.87 | 0.74 | 0.82 | 3.58 | 3.3 | 0.002 | 0.64 | 0.0 | 0.04 | 16.09 | 0.00 | 2.023 | 12.40 | 0.26 | 9.3 | 90.6 | 0.0 | -1.88 | 0.71 | 0.75 | 0.83 | 2.67 | 19448 | 2256 | 11 | 67 | 5 | 0 | 0 | logfile |
✔ | 6NT5 | 0502 | 2022-04-04 | 2019-01-28 | 4.1 | 4.28 | — | 4.1 | 0.006 | 0.93 | 0.0 | 0.05 | 10.32 | 0.01 | 2.300 | 3.59 | 0.41 | 4.7 | 95.3 | 0.0 | -2.40 | 0.73 | 0.82 | — | 4.1 | 0.002 | 0.57 | 0.0 | 0.04 | 12.52 | 0.00 | 2.325 | 6.86 | 0.00 | 2.0 | 98.0 | 0.0 | 1.95 | 1.16 | 0.73 | 0.81 | — | 4586 | 584 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N2P | 9332 | 2022-04-05 | 2018-11-13 | 4.0 | 4.78 | — | 4.2 | 0.009 | 0.87 | 0.0 | 0.04 | 7.86 | 0.01 | 2.203 | 7.41 | 0.00 | 12.8 | 87.2 | 0.0 | -4.67 | 0.58 | 0.72 | — | 4.2 | 0.002 | 0.62 | 0.0 | 0.04 | 10.81 | 0.00 | 2.162 | 7.00 | 0.00 | 8.6 | 91.4 | 0.0 | 0.39 | 1.38 | 0.59 | 0.82 | — | 14570 | 880 | 10 | 0 | 0 | 0 | 7380 | logfile |
✔ | 6GYN | 0093 | 2022-04-06 | 2018-06-30 | 3.4 | 3.66 | 3.52 | 3.6 | 0.008 | 0.85 | 0.0 | 0.05 | 9.32 | 0.01 | 2.273 | 3.08 | 0.00 | 4.7 | 95.3 | 0.0 | -2.56 | 0.66 | 0.83 | 3.51 | 3.6 | 0.002 | 0.54 | 0.0 | 0.04 | 13.29 | 0.00 | 2.264 | 7.43 | 0.17 | 2.6 | 97.4 | 0.0 | 2.33 | 0.49 | 0.65 | 0.83 | 2.26 | 16932 | 1980 | 8 | 0 | 36 | 0 | 0 | logfile |
✔ | 6RVR | 10010 | 2022-04-08 | 2019-05-31 | 3.46 | 3.63 | — | 3.5 | 0.008 | 0.75 | 0.0 | 0.05 | 14.89 | 0.00 | 2.082 | 8.59 | 0.57 | 10.3 | 89.7 | 0.0 | -4.34 | 0.81 | 0.85 | 2.30 | 3.5 | 0.002 | 0.58 | 0.0 | 0.04 | 15.89 | 0.00 | 2.183 | 6.63 | 0.19 | 6.3 | 93.7 | 0.0 | -0.67 | 0.46 | 0.79 | 0.84 | 1.75 | 37716 | 4680 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V5V | 21054 | 2022-04-04 | 2019-12-04 | 3.8 | 4.01 | — | 3.9 | 0.003 | 0.51 | 0.0 | 0.04 | 13.58 | 0.00 | 2.212 | 6.07 | 0.00 | 4.6 | 95.4 | 0.0 | -2.04 | 0.52 | 0.83 | 2.06 | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 14.64 | 0.00 | 2.192 | 7.93 | 0.30 | 3.2 | 96.8 | 0.0 | 0.28 | 0.57 | 0.53 | 0.82 | 1.76 | 2979 | 369 | 1 | 1 | 0 | 0 | 0 | logfile |
✔ | 6HYP | 0309 | 2022-04-05 | 2018-10-22 | 4.4 | 4.53 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.05 | 8.72 | 0.00 | 1.943 | 1.67 | 0.34 | 7.3 | 92.2 | 0.4 | -5.99 | 0.75 | 0.69 | — | 4.4 | 0.002 | 0.67 | 0.0 | 0.04 | 8.23 | 0.00 | 2.173 | 3.38 | 0.00 | 7.0 | 92.9 | 0.1 | -1.16 | 0.61 | 0.76 | 0.73 | — | 12392 | 2082 | 1 | 0 | 192 | 0 | 0 | logfile |
✔ | 6G19 | 4338 | 2022-04-05 | 2018-03-20 | 3.68 | 3.74 | 3.61 | 3.7 | 0.013 | 1.15 | 0.0 | 0.06 | 10.38 | 0.01 | 2.086 | 11.49 | 0.00 | 10.2 | 89.5 | 0.3 | -4.18 | 0.57 | 0.77 | 2.62 | 3.7 | 0.002 | 0.72 | 0.0 | 0.04 | 14.67 | 0.00 | 2.079 | 18.06 | 0.00 | 8.6 | 91.4 | 0.0 | -0.29 | 0.94 | 0.58 | 0.78 | 1.93 | 10503 | 682 | 4 | 28 | 2 | 0 | 4402 | logfile |
✔ | 6D8C | 7831 | 2022-04-09 | 2018-04-26 | 3.54 | 3.63 | 3.43 | 3.6 | 0.006 | 0.82 | 0.0 | 0.05 | 11.57 | 0.01 | 1.816 | 9.56 | 0.85 | 2.9 | 97.1 | 0.0 | -2.35 | 0.60 | 0.78 | 2.62 | 3.6 | 0.002 | 0.58 | 0.0 | 0.04 | 15.50 | 0.00 | 1.881 | 8.88 | 0.24 | 4.5 | 95.5 | 0.0 | 0.59 | 1.66 | 0.62 | 0.82 | 2.34 | 39181 | 2476 | 18 | 0 | 10 | 0 | 19516 | logfile |
✔ | 6CG0 | 7470 | 2022-04-06 | 2018-02-19 | 3.17 | 3.69 | — | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 20.01 | 0.00 | 2.205 | 15.18 | 4.08 | 2.5 | 97.4 | 0.1 | -2.47 | 0.91 | 0.85 | 3.15 | 3.3 | 0.002 | 0.54 | 0.0 | 0.04 | 20.30 | 0.00 | 2.133 | 7.94 | 0.12 | 2.0 | 98.0 | 0.0 | 0.50 | 0.53 | 0.92 | 0.88 | 2.66 | 20080 | 1989 | 13 | 212 | 4 | 0 | 0 | logfile |
✔ | 6H61 | 0143 | 2022-04-05 | 2018-07-25 | 4.02 | 4.20 | 3.87 | 4.0 | 0.007 | 0.84 | 0.0 | 0.05 | 9.67 | 0.00 | 2.107 | 14.74 | 0.18 | 9.5 | 90.5 | 0.0 | -2.98 | 0.62 | 0.78 | — | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 12.00 | 0.00 | 2.087 | 22.42 | 0.00 | 6.1 | 93.9 | 0.0 | 0.63 | 1.83 | 0.63 | 0.77 | — | 9912 | 660 | 4 | 30 | 1 | 0 | 4057 | logfile |
✔ | 6SYT | 10347 | 2022-04-06 | 2019-10-01 | 3.45 | 3.54 | — | 3.5 | 0.018 | 1.23 | 0.0 | 0.16 | 9.36 | 0.01 | 1.903 | 3.04 | 0.13 | 7.5 | 92.4 | 0.1 | -5.37 | 0.69 | 0.81 | 4.11 | 3.5 | 0.002 | 0.60 | 0.0 | 0.04 | 13.79 | 0.00 | 2.060 | 5.04 | 0.25 | 3.1 | 96.9 | 0.0 | 1.00 | 0.64 | 0.71 | 0.84 | 2.38 | 18369 | 2369 | 5 | 0 | 216 | 0 | 0 | logfile |
✔ | 5WEo | 8823 | 2022-04-08 | 2017-07-10 | 4.2 | 4.35 | — | 4.2 | 0.009 | 1.05 | 0.0 | 0.06 | 9.88 | 0.01 | 2.188 | 8.90 | 0.24 | 7.3 | 92.7 | 0.1 | -3.69 | 0.80 | 0.72 | — | 4.2 | 0.002 | 0.60 | 0.0 | 0.04 | 11.37 | 0.00 | 2.083 | 8.14 | 0.00 | 5.0 | 95.0 | 0.0 | 0.15 | 1.00 | 0.87 | 0.83 | — | 31168 | 3954 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6o0Z | 0585 | 2022-04-05 | 2019-02-17 | 3.3 | 3.94 | — | 3.6 | 0.006 | 0.72 | 0.0 | 0.04 | 16.28 | 0.00 | 2.302 | 2.58 | 0.27 | 6.3 | 93.7 | 0.0 | -4.11 | 0.86 | 0.88 | 3.46 | 3.6 | 0.002 | 0.52 | 0.0 | 0.03 | 16.62 | 0.00 | 2.157 | 4.96 | 0.14 | 5.7 | 94.3 | 0.0 | 0.16 | 0.32 | 0.85 | 0.88 | 3.28 | 11912 | 1288 | 4 | 135 | 0 | 0 | 0 | logfile |
✔ | 6C96 | 7434 | 2022-04-05 | 2018-01-25 | 3.4 | 3.54 | — | 3.5 | 0.009 | 1.04 | 0.0 | 0.06 | 10.46 | 0.01 | 2.277 | 3.50 | 0.30 | 5.1 | 94.9 | 0.0 | -4.38 | 0.58 | 0.82 | 3.11 | 3.5 | 0.002 | 0.66 | 0.0 | 0.04 | 15.49 | 0.00 | 2.162 | 7.57 | 0.46 | 4.3 | 95.7 | 0.0 | 1.10 | 0.76 | 0.59 | 0.83 | 1.86 | 12090 | 1446 | 4 | 0 | 8 | 0 | 0 | logfile |