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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8BPE | 16150 | 2024-03-19 | 2022-11-16 | 3.63 | 3.94 | 3.36 | 3.4 | 0.009 | 1.07 | 0.0 | 0.08 | 13.16 | 0.01 | 2.283 | 5.43 | 0.00 | 8.6 | 91.4 | 0.0 | -1.45 | 0.82 | 0.70 | 1.61 | 3.4 | 0.005 | 0.81 | 0.0 | 0.05 | 15.44 | 0.00 | 2.078 | 15.37 | 2.99 | 8.9 | 91.0 | 0.1 | -1.33 | 1.07 | 0.89 | 0.81 | 1.82 | 24195 | 3104 | 30 | 0 | 14 | 0 | 0 | logfile |
✔ | 8DBH | 27284 | 2024-03-21 | 2022-06-14 | 2.2 | 2.17 | 2.27 | 2.1 | 0.007 | 0.69 | 0.0 | 0.05 | 17.53 | 0.00 | 1.957 | 4.90 | 1.94 | 3.4 | 96.6 | 0.0 | 0.54 | 0.72 | 0.85 | 5.77 | 2.1 | 0.003 | 0.53 | 0.0 | 0.05 | 16.35 | 0.00 | 1.894 | 5.07 | 1.56 | 3.5 | 96.5 | 0.0 | 0.99 | 0.91 | 0.74 | 0.90 | 5.60 | 28884 | 3708 | 36 | 0 | 60 | 24 | 0 | logfile |
✔ | 8ooC | 17010 | 2024-03-20 | 2023-04-05 | 2.93 | 1.92 | 3.02 | 2.8 | 0.003 | 0.70 | 0.0 | 0.05 | 14.06 | 0.01 | 2.069 | 2.47 | 0.00 | 2.3 | 97.7 | 0.0 | -1.01 | 0.87 | 0.85 | 3.73 | 2.8 | 0.005 | 0.70 | 0.0 | 0.05 | 16.98 | 0.00 | 1.966 | 8.51 | 2.65 | 2.3 | 97.7 | 0.0 | 0.47 | 2.71 | 0.89 | 0.87 | 3.08 | 28371 | 3626 | 17 | 0 | 8 | 0 | 0 | logfile |
✔ | 8GXW | 34363 | 2024-03-21 | 2022-09-21 | 2.7 | 2.30 | 2.77 | 2.5 | 0.006 | 0.55 | 0.0 | 0.04 | 14.20 | 0.00 | 1.843 | 5.14 | 0.00 | 2.4 | 97.6 | 0.0 | 0.98 | 0.66 | 0.81 | 3.89 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 17.39 | 0.00 | 1.967 | 7.26 | 2.82 | 1.9 | 98.1 | 0.0 | 0.96 | 1.09 | 0.71 | 0.84 | 3.63 | 29530 | 3788 | 15 | 0 | 4 | 0 | 0 | logfile |
✔ | 5FN3 | 3238 | 2024-03-15 | 2015-11-10 | 4.1 | 4.53 | — | 4.1 | 0.011 | 1.81 | 26.0 | 0.10 | 18.64 | 0.01 | 1.021 | 20.42 | 11.34 | 10.7 | 85.3 | 4.0 | -1.54 | 0.66 | 0.60 | — | 4.1 | 0.005 | 0.85 | 0.0 | 0.04 | 13.94 | 0.01 | 2.053 | 23.14 | 0.00 | 9.5 | 89.6 | 0.9 | -0.83 | 2.22 | 0.71 | 0.79 | — | 10291 | 1318 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VQ3 | 32084 | 2024-03-11 | 2021-10-19 | 3.2 | 3.40 | — | 3.4 | 0.005 | 0.55 | 0.0 | 0.04 | 14.66 | 0.00 | 2.061 | 5.90 | 0.00 | 6.6 | 93.4 | 0.0 | -0.93 | 0.65 | 0.83 | 2.45 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 16.64 | 0.00 | 2.232 | 7.08 | 2.87 | 3.2 | 96.8 | 0.0 | 3.18 | 0.54 | 0.64 | 0.84 | 1.82 | 6306 | 800 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LJC | 23390 | 2024-03-11 | 2021-01-28 | 3.0 | 2.23 | — | 2.1 | 0.005 | 1.00 | 0.0 | 0.07 | 9.08 | 0.01 | 2.282 | 5.25 | 0.11 | 2.8 | 97.2 | 0.0 | -1.06 | 0.78 | 0.81 | 3.11 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 14.03 | 0.00 | 2.033 | 11.43 | 1.68 | 2.9 | 97.1 | 0.0 | 0.94 | 1.22 | 0.76 | 0.79 | 3.33 | 8544 | 1040 | 6 | 0 | 14 | 0 | 0 | logfile |
✔ | 6XQB | 22288 | 2024-03-17 | 2020-07-09 | 3.4 | 4.22 | — | 3.9 | 0.012 | 1.28 | 0.0 | 0.06 | 13.84 | 0.01 | 2.069 | 13.97 | 0.23 | 15.2 | 84.8 | 0.0 | -5.15 | 0.75 | 0.57 | 0.58 | 3.9 | 0.006 | 0.82 | 0.0 | 0.04 | 15.82 | 0.00 | 1.843 | 33.20 | 3.06 | 13.7 | 86.3 | 0.0 | -2.96 | 0.95 | 0.77 | 0.61 | 0.46 | 16323 | 1008 | 7 | 15 | 3 | 0 | 7987 | logfile |
✔ | 6TRE | 10560 | 2024-03-23 | 2019-12-18 | 3.3 | 3.45 | 3.26 | 3.4 | 0.009 | 0.89 | 0.0 | 0.04 | 14.70 | 0.00 | 2.016 | 18.28 | 11.33 | 10.3 | 89.7 | 0.0 | -3.34 | 0.72 | 0.78 | 2.68 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 15.43 | 0.00 | 2.143 | 11.76 | 5.60 | 2.4 | 97.6 | 0.0 | -0.67 | 1.04 | 0.71 | 0.79 | 2.80 | 38176 | 4832 | 32 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GXU | 34362 | 2024-03-21 | 2022-09-21 | 2.5 | 2.02 | 2.54 | 2.3 | 0.007 | 0.57 | 0.0 | 0.05 | 14.57 | 0.01 | 1.855 | 4.64 | 0.00 | 3.2 | 96.8 | 0.0 | 0.82 | 0.64 | 0.79 | 4.52 | 2.2 | 0.004 | 0.61 | 0.0 | 0.04 | 17.49 | 0.01 | 2.094 | 6.42 | 1.62 | 2.5 | 97.5 | 0.0 | 0.92 | 1.36 | 0.71 | 0.83 | 4.09 | 29503 | 3788 | 15 | 0 | 3 | 0 | 0 | logfile |
✔ | 7VQ7 | 32087 | 2024-03-10 | 2021-10-19 | 3.6 | 3.68 | — | 3.7 | 0.007 | 0.75 | 0.0 | 0.04 | 16.81 | 0.00 | 2.070 | 11.39 | 4.87 | 3.9 | 96.1 | 0.0 | -1.30 | 0.61 | 0.81 | 2.00 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 17.91 | 0.00 | 2.181 | 8.16 | 3.24 | 2.5 | 97.5 | 0.0 | 3.68 | 1.25 | 0.58 | 0.79 | 1.19 | 6127 | 778 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LVK | 23539 | 2024-03-27 | 2021-02-25 | 2.2 | 2.31 | — | 2.4 | 0.009 | 0.92 | 8.0 | 0.06 | 23.30 | 0.02 | 1.324 | 2.41 | 0.81 | 5.1 | 94.8 | 0.2 | -2.34 | 0.64 | 0.86 | 5.37 | 2.4 | 0.004 | 0.66 | 0.0 | 0.04 | 23.38 | 0.01 | 1.004 | 5.80 | 2.34 | 4.8 | 95.1 | 0.1 | -0.29 | 0.96 | 0.67 | 0.88 | 5.08 | 151436 | 3222 | 63 | 3016 | 181 | 2716 | 58704 | logfile |
✔ | 7BZY | 30263 | 2024-03-11 | 2020-04-29 | 3.7 | 5.07 | 3.67 | 2.9 | 0.005 | 1.03 | 0.0 | 0.05 | 7.60 | 0.00 | 2.175 | 11.89 | 0.00 | 15.0 | 84.6 | 0.3 | -5.26 | 0.62 | 0.47 | — | 3.4 | 0.003 | 0.82 | 0.0 | 0.05 | 6.08 | 0.00 | 2.106 | 13.54 | 0.00 | 14.3 | 85.7 | 0.0 | -3.30 | 1.23 | 0.85 | 0.74 | — | 6169 | 1260 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN5 | 3240 | 2024-03-14 | 2015-11-10 | 4.3 | 4.62 | — | 4.3 | 0.012 | 1.85 | 28.0 | 0.11 | 18.82 | 0.01 | 2.074 | 13.59 | 14.00 | 11.4 | 84.3 | 4.3 | -1.91 | 0.65 | 0.62 | — | 4.3 | 0.004 | 0.83 | 0.0 | 0.04 | 13.87 | 0.01 | 2.105 | 22.16 | 0.00 | 9.3 | 90.0 | 0.7 | -0.69 | 1.02 | 0.70 | 0.79 | — | 9645 | 1227 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iRS | 35684 | 2024-03-17 | 2023-03-19 | 3.0 | 3.29 | 3.10 | 3.3 | 0.013 | 1.86 | 8.0 | 0.10 | 12.74 | 0.02 | 2.555 | 0.63 | 0.00 | 4.5 | 95.5 | 0.0 | -1.14 | 0.58 | 0.72 | 3.45 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 16.02 | 0.00 | 1.994 | 12.00 | 2.69 | 3.3 | 96.7 | 0.0 | 0.39 | 1.47 | 0.56 | 0.73 | 2.73 | 17510 | 1118 | 5 | 0 | 1 | 0 | 8717 | logfile |
✔ | 8J6R | 36012 | 2024-03-14 | 2023-04-26 | 2.76 | 2.15 | 2.84 | 2.0 | 0.004 | 0.62 | 0.0 | 0.06 | 13.55 | 0.01 | 2.116 | 6.13 | 0.00 | 2.6 | 97.4 | 0.0 | 0.52 | 0.76 | 0.75 | 3.17 | 2.0 | 0.003 | 0.52 | 0.0 | 0.04 | 16.10 | 0.00 | 2.174 | 7.35 | 1.61 | 2.3 | 97.7 | 0.0 | 0.77 | 0.34 | 0.77 | 0.79 | 3.31 | 9120 | 1151 | 6 | 0 | 2 | 1 | 0 | logfile |
✔ | 8iWM | 35771 | 2024-03-10 | 2023-03-30 | 3.17 | 3.65 | 2.80 | 3.5 | 0.004 | 0.76 | 0.0 | 0.04 | 14.98 | 0.00 | 2.390 | 9.55 | 5.26 | 3.4 | 96.6 | 0.0 | -2.66 | 0.56 | 0.76 | 2.24 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 15.59 | 0.00 | 2.217 | 9.03 | 5.26 | 2.6 | 97.4 | 0.0 | 0.05 | 1.18 | 0.59 | 0.78 | 1.89 | 1980 | 271 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7NJV | 12424 | 2024-03-17 | 2021-02-17 | 2.9 | 2.81 | — | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 13.58 | 0.00 | 2.179 | 6.55 | 0.00 | 2.5 | 97.5 | 0.0 | 2.26 | 0.65 | 0.88 | 2.67 | 2.9 | 0.004 | 0.52 | 0.0 | 0.04 | 15.57 | 0.00 | 2.141 | 6.31 | 1.68 | 1.5 | 98.5 | 0.0 | 4.13 | 0.36 | 0.65 | 0.90 | 2.23 | 16463 | 1118 | 13 | 0 | 1 | 0 | 8337 | logfile |
✔ | 7KFZ | 22857 | 2024-03-11 | 2020-10-15 | 3.47 | 4.45 | 3.43 | 3.9 | 0.012 | 0.80 | 0.0 | 0.05 | 13.58 | 0.00 | 1.897 | 8.91 | 0.00 | 3.8 | 96.2 | 0.0 | -1.10 | 0.86 | 0.78 | 2.74 | 3.9 | 0.005 | 0.58 | 0.0 | 0.04 | 14.23 | 0.00 | 1.865 | 8.60 | 0.68 | 2.3 | 97.7 | 0.0 | 2.29 | 0.51 | 0.93 | 0.88 | 2.86 | 6592 | 803 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 8P52 | 17440 | 2024-03-19 | 2023-05-23 | 3.6 | 3.64 | — | 3.4 | 0.002 | 0.63 | 0.0 | 0.04 | 13.73 | 0.01 | 2.166 | 3.44 | 0.00 | 5.6 | 94.4 | 0.0 | -2.19 | 0.78 | 0.55 | 1.88 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 15.43 | 0.00 | 2.103 | 8.92 | 1.62 | 4.2 | 95.8 | 0.0 | 0.20 | 1.53 | 0.85 | 0.74 | 1.39 | 22783 | 2914 | 1 | 0 | 0 | 0 | 0 | logfile |