Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6VQ8	21319	2022-05-13	2020-02-04	3.9	4.52	—	4.2	0.009	0.97	0.0	0.06	10.70	0.00	2.220	3.91	0.78	2.5	97.3	0.2	0.61	0.78	0.73	1.33	4.2	0.005	0.87	0.0	0.05	14.37	0.01	2.011	21.51	0.41	4.2	95.7	0.0	0.82	2.77	0.81	0.81	1.06	60714	8451	35	0	1	0	0	logfile
✔	6WLB	21820	2022-05-16	2020-04-19	3.5	3.89	—	3.8	0.004	0.56	0.0	0.06	13.08	0.00	2.123	6.89	0.16	4.2	95.8	0.0	1.33	0.66	0.78	1.05	3.8	0.003	0.57	0.0	0.06	14.48	0.01	2.021	7.18	0.21	5.5	94.5	0.0	1.30	1.20	0.64	0.79	1.68	34441	2160	6	0	15	0	16960	logfile
✔	6VQ7	21318	2022-05-13	2020-02-04	4.0	4.63	—	4.2	0.009	0.98	2.0	0.06	10.86	0.01	2.219	3.92	0.61	2.5	97.3	0.2	0.65	0.79	0.72	—	4.2	0.004	0.86	0.0	0.05	14.28	0.00	1.949	21.56	0.46	4.3	95.7	0.0	0.70	1.47	0.82	0.81	—	62325	8454	35	0	2	0	0	logfile
✔	6SKi	10225	2022-05-12	2019-08-15	2.6	2.97	2.57	2.9	0.004	0.72	0.0	0.04	16.20	0.00	2.210	8.64	1.29	1.6	98.4	0.0	-0.80	0.63	0.83	4.83	2.9	0.003	0.55	0.0	0.04	16.67	0.00	2.267	7.50	1.94	3.1	96.9	0.0	0.90	0.51	0.63	0.84	4.48	4434	569	2	0	0	0	0	logfile
✔	6SJL	10218	2022-05-14	2019-08-13	2.6	3.00	2.64	2.9	0.013	0.87	0.0	0.05	14.60	0.01	1.985	13.14	0.05	5.7	94.1	0.2	-2.82	0.70	0.83	5.22	2.9	0.007	0.83	0.0	0.05	16.74	0.00	1.806	11.86	1.64	5.2	94.8	0.0	-0.57	1.14	0.71	0.85	4.26	19459	2537	6	0	0	0	0	logfile
✔	6XKL	22221	2022-05-15	2020-06-26	3.21	2.34	3.27	3.3	0.008	1.01	0.0	0.07	14.28	0.01	2.034	6.61	3.62	4.1	95.8	0.1	-0.34	0.73	0.76	3.00	3.3	0.006	0.82	0.0	0.05	15.37	0.01	2.180	5.81	0.21	2.9	97.1	0.0	0.25	0.47	0.75	0.78	2.64	22895	2920	17	0	50	0	0	logfile
✔	6TU3	10586	2022-05-18	2020-01-02	2.7	2.82	2.74	2.8	0.006	0.81	0.0	0.05	16.10	0.01	1.264	9.35	8.29	5.8	94.2	0.0	-2.57	0.76	0.83	2.83	2.8	0.006	0.78	0.0	0.05	17.67	0.01	2.068	7.13	5.59	4.9	95.1	0.0	-0.38	0.57	0.77	0.85	2.79	47002	6158	28	0	0	0	0	logfile
✔	6oQW	20172	2022-05-17	2019-04-29	3.1	3.49	—	3.3	0.005	0.82	5.0	0.05	14.42	0.00	1.924	4.66	1.75	3.3	96.6	0.1	-2.30	0.77	0.83	2.57	3.3	0.004	0.69	0.0	0.04	15.87	0.00	1.933	8.53	0.24	3.4	96.6	0.0	0.72	0.78	0.79	0.89	2.54	36901	4847	28	0	12	0	0	logfile
✔	6WNR	21855	2022-05-17	2020-04-23	3.3	3.61	—	3.4	0.005	0.96	1.0	0.06	14.34	0.01	1.869	2.24	1.44	2.8	97.2	0.0	-1.29	0.77	0.85	2.75	3.4	0.003	0.72	0.0	0.04	15.71	0.00	1.932	9.30	0.16	3.1	96.9	0.0	0.76	0.79	0.79	0.88	2.10	36934	4851	28	0	12	0	0	logfile
✔	6PQV	20454	2022-05-17	2019-07-10	3.3	3.54	—	3.4	0.009	0.93	1.0	0.05	14.70	0.00	1.757	4.51	2.58	3.6	96.3	0.0	-2.75	0.75	0.86	3.27	3.4	0.003	0.69	0.0	0.04	15.86	0.00	1.963	8.90	0.39	2.4	97.6	0.0	0.52	1.29	0.77	0.88	2.55	36971	4851	28	0	12	0	0	logfile
✔	6oQR	20167	2022-05-17	2019-04-29	3.1	3.49	—	3.3	0.010	0.90	3.0	0.05	14.75	0.00	1.753	4.66	2.50	3.5	96.5	0.0	-2.47	0.77	0.86	3.56	3.3	0.003	0.69	0.0	0.04	15.90	0.00	1.967	8.61	0.23	2.9	97.1	0.0	0.53	1.27	0.79	0.89	2.47	36951	4849	28	0	12	0	0	logfile
✔	6oQV	20171	2022-05-17	2019-04-29	3.3	3.60	—	3.4	0.010	0.94	1.0	0.05	14.75	0.00	1.740	5.27	2.95	4.1	95.9	0.0	-2.77	0.76	0.85	3.07	3.4	0.003	0.69	0.0	0.04	15.69	0.00	1.933	8.23	0.23	2.7	97.3	0.0	0.90	1.99	0.79	0.88	2.33	36971	4851	28	0	12	0	0	logfile
✔	6WNQ	21854	2022-05-17	2020-04-23	3.4	3.73	—	3.5	0.012	1.16	2.0	0.06	14.48	0.01	1.781	3.91	2.16	3.0	97.0	0.0	-1.62	0.76	0.85	2.50	3.5	0.004	0.71	0.0	0.04	15.97	0.00	1.879	10.02	0.21	3.1	96.9	0.0	0.89	1.72	0.77	0.87	1.97	37024	4857	28	0	12	0	0	logfile
✔	6oQU	20170	2022-05-17	2019-04-29	3.2	3.50	—	3.3	0.009	0.93	2.0	0.05	14.95	0.00	1.718	4.70	2.92	3.5	96.5	0.0	-2.70	0.75	0.86	3.08	3.3	0.005	0.72	0.0	0.04	15.80	0.01	1.860	8.70	0.39	2.8	97.2	0.0	0.51	0.66	0.78	0.89	2.35	36971	4851	28	0	12	0	0	logfile
✔	6VoA	21259	2022-05-15	2020-01-30	4.0	4.24	—	4.1	0.004	0.83	8.0	0.06	14.09	0.00	1.107	13.97	1.57	8.8	90.7	0.5	-3.28	0.69	0.58	—	4.1	0.007	0.80	0.0	0.04	16.17	0.00	2.188	14.25	0.67	7.9	92.1	0.1	-1.17	2.40	0.77	0.69	—	26824	3958	9	0	0	0	0	logfile
✔	6oQS	20168	2022-05-17	2019-04-29	3.3	3.55	—	3.4	0.008	0.85	0.0	0.05	14.37	0.00	1.849	5.70	1.80	2.5	97.5	0.0	-2.20	0.76	0.86	3.40	3.4	0.003	0.67	0.0	0.04	15.90	0.00	1.977	8.82	0.23	2.5	97.5	0.0	0.61	1.67	0.78	0.89	2.45	36971	4851	28	0	12	0	0	logfile
✔	6oQT	20169	2022-05-17	2019-04-29	3.1	3.48	—	3.3	0.008	0.86	1.0	0.05	14.36	0.00	1.781	3.86	1.96	2.9	97.1	0.0	-2.11	0.78	0.88	3.44	3.3	0.003	0.64	0.0	0.04	15.72	0.00	1.967	7.01	0.34	2.4	97.6	0.0	0.89	1.24	0.79	0.89	2.51	36971	4851	28	0	12	0	0	logfile
✔	6ZVH	11456	2022-05-15	2020-07-24	2.9	3.10	2.84	2.8	0.008	0.95	1.0	0.05	15.50	0.01	1.992	5.03	0.00	4.9	94.9	0.2	-2.07	0.54	0.88	3.23	2.8	0.006	0.72	0.0	0.04	16.24	0.01	1.852	9.01	2.15	8.5	91.4	0.2	-0.92	1.10	0.54	0.89	2.84	79014	5074	43	1815	33	0	0	logfile
✔	6SK0	10219	2022-05-12	2019-08-14	2.3	2.30	2.11	2.2	0.008	0.74	0.0	0.05	15.85	0.00	2.202	9.23	0.97	3.3	96.7	0.0	-1.30	0.70	0.83	6.89	2.2	0.005	0.72	0.0	0.05	17.22	0.00	2.164	10.52	0.65	4.5	95.5	0.0	-1.28	1.50	0.80	0.90	6.82	5826	792	3	0	0	0	0	logfile
✔	6KPH	0746	2022-05-13	2019-08-15	2.41	3.45	—	3.2	0.014	1.01	0.0	0.15	14.01	0.00	1.838	8.27	0.00	8.5	91.5	0.0	-4.25	0.81	0.85	4.19	3.2	0.004	0.73	0.0	0.15	15.62	0.00	1.777	7.89	1.06	4.1	95.9	0.0	0.19	0.81	0.80	0.86	4.21	62832	3936	24	0	48	0	31212	logfile

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