Table showing results for December 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7Q2X	13783	2022-12-14	2021-10-26	3.0	2.22	—	2.1	0.002	0.55	0.0	0.04	17.41	0.00	2.035	7.71	0.11	2.6	97.4	0.0	2.57	0.74	0.70	1.84	2.0	0.003	0.66	0.0	0.04	20.39	0.00	1.911	9.70	2.21	3.4	96.6	0.0	1.91	1.28	0.78	0.79	2.05	18240	2098	8	72	6	0	0	logfile
✔	7V30	31648	2022-12-13	2021-08-10	2.7	2.83	—	2.8	0.007	0.83	3.0	0.05	15.05	0.01	1.788	10.41	0.21	3.7	96.2	0.1	1.16	0.78	0.86	3.12	2.8	0.002	0.56	0.0	0.04	16.93	0.00	2.039	8.25	1.39	3.9	96.1	0.0	1.04	0.36	0.78	0.88	2.85	66820	8140	67	0	39	0	0	logfile
✔	7V2R	31647	2022-12-14	2021-08-09	2.6	2.62	—	2.6	0.008	0.91	13.0	0.06	17.44	0.01	1.360	9.91	1.24	3.6	96.2	0.1	1.07	0.78	0.87	3.78	2.6	0.002	0.55	0.0	0.04	17.12	0.00	2.171	7.30	1.65	3.7	96.3	0.0	1.23	0.29	0.79	0.89	3.52	68260	8270	68	0	47	0	0	logfile
✔	7V31	31649	2022-12-13	2021-08-10	2.9	2.99	—	3.0	0.007	0.90	11.0	0.05	15.30	0.01	1.681	11.57	0.36	3.4	96.5	0.1	0.59	0.79	0.87	3.49	3.0	0.002	0.55	0.0	0.04	16.66	0.00	2.088	8.14	1.41	3.6	96.4	0.0	1.10	0.37	0.78	0.88	3.05	68204	8269	71	0	47	0	0	logfile
✔	7V2K	31646	2022-12-13	2021-08-09	2.7	2.78	—	2.8	0.007	0.90	9.0	0.05	14.85	0.01	1.354	14.42	0.40	3.7	96.2	0.1	1.05	0.77	0.83	3.21	2.7	0.004	0.66	0.0	0.04	16.92	0.01	2.048	9.33	1.76	4.0	96.0	0.1	0.75	0.43	0.79	0.86	3.05	66880	8174	67	0	38	0	0	logfile
✔	7V2H	31645	2022-12-14	2021-08-09	2.5	2.61	—	2.6	0.007	0.82	1.0	0.04	15.52	0.01	1.909	9.03	0.10	2.9	97.0	0.1	1.20	0.79	0.87	3.94	2.6	0.004	0.60	0.0	0.04	16.78	0.00	2.154	7.41	1.17	3.2	96.7	0.1	1.10	0.31	0.78	0.88	3.89	68293	8270	69	0	47	0	0	logfile
✔	7V2F	31644	2022-12-13	2021-08-09	3.1	3.14	—	3.1	0.008	0.85	1.0	0.05	15.93	0.01	1.772	11.43	0.06	4.2	95.7	0.1	0.58	0.79	0.86	3.39	3.1	0.006	0.66	0.0	0.05	16.56	0.01	2.025	9.28	0.34	4.8	95.2	0.1	0.68	0.32	0.81	0.89	3.09	66939	8140	67	0	41	0	0	logfile
✔	7V2E	31643	2022-12-14	2021-08-08	2.8	2.87	—	2.8	0.008	0.90	8.0	0.05	15.22	0.01	1.695	10.90	0.40	3.6	96.1	0.2	0.73	0.80	0.87	3.71	2.8	0.003	0.56	0.0	0.04	16.62	0.00	2.127	8.01	1.27	3.8	96.2	0.1	0.96	0.35	0.79	0.89	3.34	68244	8269	68	0	45	0	0	logfile
✔	7V2D	31641	2022-12-13	2021-08-08	3.3	3.60	—	3.6	0.006	0.78	2.0	0.04	15.82	0.01	1.477	11.48	0.18	3.8	96.1	0.1	1.15	0.80	0.87	2.71	3.5	0.005	0.62	0.0	0.04	16.30	0.00	2.089	8.89	0.31	4.4	95.6	0.0	1.09	0.34	0.82	0.90	2.49	66899	8140	68	0	40	0	0	logfile
✔	7V2C	31640	2022-12-14	2021-08-08	2.9	3.03	—	3.2	0.007	0.87	5.0	0.05	15.02	0.01	1.632	11.79	0.39	4.0	95.9	0.1	0.64	0.78	0.87	3.28	3.2	0.002	0.56	0.0	0.04	16.29	0.00	2.112	8.26	1.23	3.5	96.4	0.0	1.11	1.56	0.76	0.87	2.71	68315	8269	70	0	46	0	0	logfile
✔	7QL4	14063	2022-12-11	2021-12-19	3.2	3.36	2.99	3.5	0.011	1.86	0.0	0.10	12.28	0.01	2.511	0.28	0.00	8.3	91.7	0.0	-1.77	0.26	0.51	0.51	3.4	0.003	0.59	0.0	0.05	15.13	0.00	2.055	8.49	0.00	1.8	98.2	0.0	-1.69	3.11	0.31	0.74	3.85	7074	456	6	0	0	0	3606	logfile
✔	7QWL	14188	2022-12-11	2022-01-25	3.47	3.11	2.99	3.5	0.012	2.27	14.0	0.13	13.78	0.01	2.501	4.15	1.06	11.3	88.2	0.5	-3.35	0.45	0.81	5.36	3.4	0.007	0.84	0.0	0.05	15.70	0.00	2.069	12.44	1.06	14.3	85.7	0.0	-3.21	2.77	0.39	0.82	4.61	3258	405	3	0	0	0	0	logfile
✔	7QJZ	14027	2022-12-11	2021-12-17	3.4	3.37	3.42	3.5	0.011	2.09	0.0	0.10	13.72	0.01	2.490	0.58	0.00	5.3	94.4	0.2	-3.28	0.40	0.74	4.32	3.5	0.003	0.71	0.0	0.05	14.98	0.00	2.231	6.83	0.26	4.2	95.8	0.0	-2.74	3.99	0.35	0.74	4.05	3378	444	6	0	0	0	0	logfile
✔	7QJY	14026	2022-12-11	2021-12-17	3.14	2.93	3.08	3.1	0.011	1.87	0.0	0.09	12.32	0.01	2.519	0.00	0.25	5.7	94.3	0.0	-2.50	0.38	0.82	5.27	3.1	0.008	0.87	0.0	0.05	17.16	0.01	2.116	9.11	1.26	3.4	96.6	0.0	-2.45	3.42	0.36	0.83	4.60	3444	450	6	0	0	0	0	logfile
✔	7QK3	14030	2022-12-11	2021-12-17	2.44	2.73	2.35	2.7	0.010	2.07	0.0	0.11	12.55	0.01	2.519	0.00	0.00	3.4	96.6	0.0	-3.04	0.38	0.77	5.65	2.7	0.003	0.73	0.0	0.05	16.22	0.00	2.309	3.65	1.28	4.0	96.0	0.0	-2.83	1.47	0.40	0.82	5.18	2742	183	3	0	0	0	1407	logfile
✔	7QK2	14029	2022-12-11	2021-12-17	2.61	2.61	2.37	2.7	0.011	1.86	10.0	0.11	10.81	0.01	2.499	0.76	0.00	4.1	95.9	0.0	-1.51	0.37	0.86	6.04	2.7	0.003	0.65	0.0	0.05	17.08	0.00	2.113	4.99	2.96	2.7	97.3	0.0	-1.83	1.72	0.37	0.87	5.30	3246	426	6	0	0	0	0	logfile
✔	7o0V	12680	2022-12-11	2021-03-27	2.5	2.50	—	2.4	0.017	4.34	0.0	0.05	22.36	0.01	2.117	2.10	0.31	1.2	98.8	0.0	1.63	0.82	0.86	5.41	2.4	0.006	1.84	0.0	0.04	21.46	0.00	2.030	7.90	1.48	0.9	99.1	0.0	3.36	0.49	0.84	0.89	4.38	55475	4947	238	0	317	489	0	logfile
✔	7E94	31028	2022-12-22	2021-03-03	4.67	5.59	—	4.2	0.008	1.47	7.0	0.08	14.82	0.01	1.403	10.84	1.04	12.4	86.6	1.0	-5.01	0.78	0.52	—	4.1	0.004	0.82	0.0	0.05	13.45	0.00	2.019	23.24	0.03	12.9	86.9	0.2	-2.86	1.55	0.88	0.62	—	46305	6583	22	0	0	0	0	logfile
✔	7E8S	31021	2022-12-22	2021-03-02	4.36	4.87	—	4.2	0.007	1.44	6.0	0.08	14.38	0.01	1.149	8.17	0.55	9.7	89.4	0.8	-4.63	0.75	0.47	—	3.9	0.009	1.22	0.0	0.06	13.84	0.01	1.861	42.86	0.02	15.5	84.3	0.3	-3.40	1.27	0.87	0.73	—	46554	6572	22	0	0	0	0	logfile
✔	7o0U	12679	2022-12-11	2021-03-27	2.35	2.42	—	2.3	0.017	4.33	0.0	0.05	22.25	0.01	2.121	2.09	0.41	1.2	98.8	0.0	1.39	0.83	0.86	5.52	2.3	0.003	1.71	0.0	0.03	20.54	0.00	1.837	7.07	1.12	0.9	99.1	0.0	4.04	0.50	0.84	0.89	4.10	55758	4972	236	0	320	491	0	logfile

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