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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Q2X | 13783 | 2022-12-14 | 2021-10-26 | 3.0 | 2.22 | — | 2.1 | 0.002 | 0.55 | 0.0 | 0.04 | 17.41 | 0.00 | 2.035 | 7.71 | 0.11 | 2.6 | 97.4 | 0.0 | 2.57 | 0.74 | 0.70 | 1.84 | 2.0 | 0.003 | 0.66 | 0.0 | 0.04 | 20.39 | 0.00 | 1.911 | 9.70 | 2.21 | 3.4 | 96.6 | 0.0 | 1.91 | 1.28 | 0.78 | 0.79 | 2.05 | 18240 | 2098 | 8 | 72 | 6 | 0 | 0 | logfile |
✔ | 7V30 | 31648 | 2022-12-13 | 2021-08-10 | 2.7 | 2.83 | — | 2.8 | 0.007 | 0.83 | 3.0 | 0.05 | 15.05 | 0.01 | 1.788 | 10.41 | 0.21 | 3.7 | 96.2 | 0.1 | 1.16 | 0.78 | 0.86 | 3.12 | 2.8 | 0.002 | 0.56 | 0.0 | 0.04 | 16.93 | 0.00 | 2.039 | 8.25 | 1.39 | 3.9 | 96.1 | 0.0 | 1.04 | 0.36 | 0.78 | 0.88 | 2.85 | 66820 | 8140 | 67 | 0 | 39 | 0 | 0 | logfile |
✔ | 7V2R | 31647 | 2022-12-14 | 2021-08-09 | 2.6 | 2.62 | — | 2.6 | 0.008 | 0.91 | 13.0 | 0.06 | 17.44 | 0.01 | 1.360 | 9.91 | 1.24 | 3.6 | 96.2 | 0.1 | 1.07 | 0.78 | 0.87 | 3.78 | 2.6 | 0.002 | 0.55 | 0.0 | 0.04 | 17.12 | 0.00 | 2.171 | 7.30 | 1.65 | 3.7 | 96.3 | 0.0 | 1.23 | 0.29 | 0.79 | 0.89 | 3.52 | 68260 | 8270 | 68 | 0 | 47 | 0 | 0 | logfile |
✔ | 7V31 | 31649 | 2022-12-13 | 2021-08-10 | 2.9 | 2.99 | — | 3.0 | 0.007 | 0.90 | 11.0 | 0.05 | 15.30 | 0.01 | 1.681 | 11.57 | 0.36 | 3.4 | 96.5 | 0.1 | 0.59 | 0.79 | 0.87 | 3.49 | 3.0 | 0.002 | 0.55 | 0.0 | 0.04 | 16.66 | 0.00 | 2.088 | 8.14 | 1.41 | 3.6 | 96.4 | 0.0 | 1.10 | 0.37 | 0.78 | 0.88 | 3.05 | 68204 | 8269 | 71 | 0 | 47 | 0 | 0 | logfile |
✔ | 7V2K | 31646 | 2022-12-13 | 2021-08-09 | 2.7 | 2.78 | — | 2.8 | 0.007 | 0.90 | 9.0 | 0.05 | 14.85 | 0.01 | 1.354 | 14.42 | 0.40 | 3.7 | 96.2 | 0.1 | 1.05 | 0.77 | 0.83 | 3.21 | 2.7 | 0.004 | 0.66 | 0.0 | 0.04 | 16.92 | 0.01 | 2.048 | 9.33 | 1.76 | 4.0 | 96.0 | 0.1 | 0.75 | 0.43 | 0.79 | 0.86 | 3.05 | 66880 | 8174 | 67 | 0 | 38 | 0 | 0 | logfile |
✔ | 7V2H | 31645 | 2022-12-14 | 2021-08-09 | 2.5 | 2.61 | — | 2.6 | 0.007 | 0.82 | 1.0 | 0.04 | 15.52 | 0.01 | 1.909 | 9.03 | 0.10 | 2.9 | 97.0 | 0.1 | 1.20 | 0.79 | 0.87 | 3.94 | 2.6 | 0.004 | 0.60 | 0.0 | 0.04 | 16.78 | 0.00 | 2.154 | 7.41 | 1.17 | 3.2 | 96.7 | 0.1 | 1.10 | 0.31 | 0.78 | 0.88 | 3.89 | 68293 | 8270 | 69 | 0 | 47 | 0 | 0 | logfile |
✔ | 7V2F | 31644 | 2022-12-13 | 2021-08-09 | 3.1 | 3.14 | — | 3.1 | 0.008 | 0.85 | 1.0 | 0.05 | 15.93 | 0.01 | 1.772 | 11.43 | 0.06 | 4.2 | 95.7 | 0.1 | 0.58 | 0.79 | 0.86 | 3.39 | 3.1 | 0.006 | 0.66 | 0.0 | 0.05 | 16.56 | 0.01 | 2.025 | 9.28 | 0.34 | 4.8 | 95.2 | 0.1 | 0.68 | 0.32 | 0.81 | 0.89 | 3.09 | 66939 | 8140 | 67 | 0 | 41 | 0 | 0 | logfile |
✔ | 7V2E | 31643 | 2022-12-14 | 2021-08-08 | 2.8 | 2.87 | — | 2.8 | 0.008 | 0.90 | 8.0 | 0.05 | 15.22 | 0.01 | 1.695 | 10.90 | 0.40 | 3.6 | 96.1 | 0.2 | 0.73 | 0.80 | 0.87 | 3.71 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.62 | 0.00 | 2.127 | 8.01 | 1.27 | 3.8 | 96.2 | 0.1 | 0.96 | 0.35 | 0.79 | 0.89 | 3.34 | 68244 | 8269 | 68 | 0 | 45 | 0 | 0 | logfile |
✔ | 7V2D | 31641 | 2022-12-13 | 2021-08-08 | 3.3 | 3.60 | — | 3.6 | 0.006 | 0.78 | 2.0 | 0.04 | 15.82 | 0.01 | 1.477 | 11.48 | 0.18 | 3.8 | 96.1 | 0.1 | 1.15 | 0.80 | 0.87 | 2.71 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 16.30 | 0.00 | 2.089 | 8.89 | 0.31 | 4.4 | 95.6 | 0.0 | 1.09 | 0.34 | 0.82 | 0.90 | 2.49 | 66899 | 8140 | 68 | 0 | 40 | 0 | 0 | logfile |
✔ | 7V2C | 31640 | 2022-12-14 | 2021-08-08 | 2.9 | 3.03 | — | 3.2 | 0.007 | 0.87 | 5.0 | 0.05 | 15.02 | 0.01 | 1.632 | 11.79 | 0.39 | 4.0 | 95.9 | 0.1 | 0.64 | 0.78 | 0.87 | 3.28 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 16.29 | 0.00 | 2.112 | 8.26 | 1.23 | 3.5 | 96.4 | 0.0 | 1.11 | 1.56 | 0.76 | 0.87 | 2.71 | 68315 | 8269 | 70 | 0 | 46 | 0 | 0 | logfile |
✔ | 7QL4 | 14063 | 2022-12-11 | 2021-12-19 | 3.2 | 3.36 | 2.99 | 3.5 | 0.011 | 1.86 | 0.0 | 0.10 | 12.28 | 0.01 | 2.511 | 0.28 | 0.00 | 8.3 | 91.7 | 0.0 | -1.77 | 0.26 | 0.51 | 0.51 | 3.4 | 0.003 | 0.59 | 0.0 | 0.05 | 15.13 | 0.00 | 2.055 | 8.49 | 0.00 | 1.8 | 98.2 | 0.0 | -1.69 | 3.11 | 0.31 | 0.74 | 3.85 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 7QWL | 14188 | 2022-12-11 | 2022-01-25 | 3.47 | 3.11 | 2.99 | 3.5 | 0.012 | 2.27 | 14.0 | 0.13 | 13.78 | 0.01 | 2.501 | 4.15 | 1.06 | 11.3 | 88.2 | 0.5 | -3.35 | 0.45 | 0.81 | 5.36 | 3.4 | 0.007 | 0.84 | 0.0 | 0.05 | 15.70 | 0.00 | 2.069 | 12.44 | 1.06 | 14.3 | 85.7 | 0.0 | -3.21 | 2.77 | 0.39 | 0.82 | 4.61 | 3258 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QJZ | 14027 | 2022-12-11 | 2021-12-17 | 3.4 | 3.37 | 3.42 | 3.5 | 0.011 | 2.09 | 0.0 | 0.10 | 13.72 | 0.01 | 2.490 | 0.58 | 0.00 | 5.3 | 94.4 | 0.2 | -3.28 | 0.40 | 0.74 | 4.32 | 3.5 | 0.003 | 0.71 | 0.0 | 0.05 | 14.98 | 0.00 | 2.231 | 6.83 | 0.26 | 4.2 | 95.8 | 0.0 | -2.74 | 3.99 | 0.35 | 0.74 | 4.05 | 3378 | 444 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QJY | 14026 | 2022-12-11 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.008 | 0.87 | 0.0 | 0.05 | 17.16 | 0.01 | 2.116 | 9.11 | 1.26 | 3.4 | 96.6 | 0.0 | -2.45 | 3.42 | 0.36 | 0.83 | 4.60 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK3 | 14030 | 2022-12-11 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.73 | 0.0 | 0.05 | 16.22 | 0.00 | 2.309 | 3.65 | 1.28 | 4.0 | 96.0 | 0.0 | -2.83 | 1.47 | 0.40 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 7QK2 | 14029 | 2022-12-11 | 2021-12-17 | 2.61 | 2.61 | 2.37 | 2.7 | 0.011 | 1.86 | 10.0 | 0.11 | 10.81 | 0.01 | 2.499 | 0.76 | 0.00 | 4.1 | 95.9 | 0.0 | -1.51 | 0.37 | 0.86 | 6.04 | 2.7 | 0.003 | 0.65 | 0.0 | 0.05 | 17.08 | 0.00 | 2.113 | 4.99 | 2.96 | 2.7 | 97.3 | 0.0 | -1.83 | 1.72 | 0.37 | 0.87 | 5.30 | 3246 | 426 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o0V | 12680 | 2022-12-11 | 2021-03-27 | 2.5 | 2.50 | — | 2.4 | 0.017 | 4.34 | 0.0 | 0.05 | 22.36 | 0.01 | 2.117 | 2.10 | 0.31 | 1.2 | 98.8 | 0.0 | 1.63 | 0.82 | 0.86 | 5.41 | 2.4 | 0.006 | 1.84 | 0.0 | 0.04 | 21.46 | 0.00 | 2.030 | 7.90 | 1.48 | 0.9 | 99.1 | 0.0 | 3.36 | 0.49 | 0.84 | 0.89 | 4.38 | 55475 | 4947 | 238 | 0 | 317 | 489 | 0 | logfile |
✔ | 7E94 | 31028 | 2022-12-22 | 2021-03-03 | 4.67 | 5.59 | — | 4.2 | 0.008 | 1.47 | 7.0 | 0.08 | 14.82 | 0.01 | 1.403 | 10.84 | 1.04 | 12.4 | 86.6 | 1.0 | -5.01 | 0.78 | 0.52 | — | 4.1 | 0.004 | 0.82 | 0.0 | 0.05 | 13.45 | 0.00 | 2.019 | 23.24 | 0.03 | 12.9 | 86.9 | 0.2 | -2.86 | 1.55 | 0.88 | 0.62 | — | 46305 | 6583 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E8S | 31021 | 2022-12-22 | 2021-03-02 | 4.36 | 4.87 | — | 4.2 | 0.007 | 1.44 | 6.0 | 0.08 | 14.38 | 0.01 | 1.149 | 8.17 | 0.55 | 9.7 | 89.4 | 0.8 | -4.63 | 0.75 | 0.47 | — | 3.9 | 0.009 | 1.22 | 0.0 | 0.06 | 13.84 | 0.01 | 1.861 | 42.86 | 0.02 | 15.5 | 84.3 | 0.3 | -3.40 | 1.27 | 0.87 | 0.73 | — | 46554 | 6572 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o0U | 12679 | 2022-12-11 | 2021-03-27 | 2.35 | 2.42 | — | 2.3 | 0.017 | 4.33 | 0.0 | 0.05 | 22.25 | 0.01 | 2.121 | 2.09 | 0.41 | 1.2 | 98.8 | 0.0 | 1.39 | 0.83 | 0.86 | 5.52 | 2.3 | 0.003 | 1.71 | 0.0 | 0.03 | 20.54 | 0.00 | 1.837 | 7.07 | 1.12 | 0.9 | 99.1 | 0.0 | 4.04 | 0.50 | 0.84 | 0.89 | 4.10 | 55758 | 4972 | 236 | 0 | 320 | 491 | 0 | logfile |