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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8G0Z | 29658 | 2023-11-18 | 2023-02-01 | 3.61 | 3.76 | 3.60 | 3.8 | 0.005 | 0.74 | 0.0 | 0.05 | 11.86 | 0.00 | 1.829 | 12.10 | 2.19 | 5.7 | 94.3 | 0.0 | 0.25 | 0.52 | 0.59 | 1.01 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 16.02 | 0.00 | 1.903 | 12.39 | 0.36 | 5.6 | 94.4 | 0.0 | -0.13 | 0.94 | 0.64 | 0.71 | 1.23 | 20944 | 2592 | 12 | 12 | 10 | 0 | 0 | logfile |
✔ | 7E2D | 30955 | 2023-11-18 | 2021-02-05 | 3.71 | 3.99 | — | 3.8 | 0.007 | 1.44 | 3.0 | 0.08 | 14.42 | 0.01 | 1.563 | 7.01 | 0.69 | 10.0 | 89.1 | 0.9 | -4.65 | 0.81 | 0.70 | 1.33 | 3.7 | 0.005 | 0.83 | 0.0 | 0.05 | 16.03 | 0.00 | 2.138 | 17.49 | 0.54 | 13.2 | 86.5 | 0.2 | -2.36 | 0.75 | 0.82 | 0.75 | 1.29 | 23331 | 3291 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D66 | 27218 | 2023-11-15 | 2022-06-06 | 3.14 | 3.25 | 3.04 | 3.2 | 0.009 | 1.02 | 0.0 | 0.06 | 16.96 | 0.01 | 2.309 | 7.77 | 0.00 | 6.2 | 93.8 | 0.0 | -1.63 | 0.69 | 0.83 | 3.44 | 3.2 | 0.004 | 0.57 | 0.0 | 0.05 | 15.52 | 0.00 | 2.214 | 7.58 | 0.36 | 5.2 | 94.8 | 0.0 | 0.02 | 0.37 | 0.66 | 0.83 | 3.50 | 12800 | 1540 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 5T62 | 8362 | 2023-11-18 | 2016-09-01 | 3.3 | 3.38 | — | 3.4 | 0.007 | 1.13 | 5.0 | 0.09 | 17.39 | 0.01 | 1.390 | 1.88 | 6.32 | 8.1 | 89.7 | 2.2 | -4.03 | 0.68 | 0.78 | 3.21 | 3.3 | 0.005 | 0.70 | 0.0 | 0.04 | 16.38 | 0.01 | 1.047 | 5.65 | 0.62 | 7.2 | 92.1 | 0.6 | -1.52 | 0.70 | 0.80 | 0.87 | 2.54 | 131766 | 7061 | 57 | 3483 | 438 | 6 | 0 | logfile |
✔ | 7XJL | 33231 | 2023-11-14 | 2022-04-18 | 3.5 | 3.88 | 3.61 | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 13.57 | 0.00 | 2.168 | 10.62 | 0.00 | 2.4 | 97.6 | 0.0 | 0.78 | 0.63 | 0.77 | 1.72 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.86 | 0.00 | 2.122 | 16.26 | 0.58 | 3.0 | 97.0 | 0.0 | 0.94 | 0.47 | 0.62 | 0.77 | 1.62 | 8527 | 1137 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G06 | 3366 | 2023-11-19 | 2016-03-17 | 4.2 | 4.89 | — | 4.7 | 0.036 | 3.53 | 246.0 | 0.21 | 17.03 | 0.03 | 1.189 | 3.05 | 3.01 | 5.9 | 92.3 | 1.9 | -2.39 | 0.66 | 0.46 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 14.36 | 0.00 | 2.082 | 17.81 | 0.00 | 4.2 | 95.6 | 0.1 | -0.48 | 1.80 | 0.88 | 0.79 | — | 26794 | 3420 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X67 | 22072 | 2023-11-15 | 2020-05-27 | 3.47 | 3.79 | — | 3.7 | 0.015 | 1.84 | 8.0 | 0.10 | 21.15 | 0.01 | 2.028 | 8.90 | 0.23 | 4.6 | 94.5 | 0.8 | -0.81 | 0.74 | 0.82 | 2.49 | 3.7 | 0.004 | 0.74 | 0.0 | 0.04 | 22.65 | 0.00 | 2.204 | 10.31 | 0.68 | 6.0 | 93.9 | 0.1 | 0.03 | 0.81 | 0.69 | 0.83 | 1.75 | 10984 | 956 | 10 | 160 | 8 | 0 | 0 | logfile |
✔ | 7o17 | 12692 | 2023-11-15 | 2021-03-28 | 4.5 | 4.66 | — | 4.2 | 0.007 | 1.22 | 0.0 | 0.07 | 16.51 | 0.01 | 2.089 | 10.97 | 1.09 | 9.8 | 90.2 | 0.0 | -5.33 | 0.78 | 0.83 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 14.39 | 0.00 | 1.928 | 23.91 | 0.00 | 8.0 | 92.0 | 0.0 | -1.97 | 0.57 | 0.78 | 0.83 | — | 11679 | 1531 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7SL9 | 25195 | 2023-11-13 | 2021-10-23 | 3.5 | 3.79 | — | 3.7 | 0.005 | 0.95 | 0.0 | 0.06 | 13.95 | 0.01 | 2.259 | 4.68 | 0.40 | 5.9 | 94.1 | 0.0 | -6.01 | 0.64 | 0.82 | 2.99 | 3.7 | 0.004 | 0.80 | 0.0 | 0.04 | 15.68 | 0.00 | 2.101 | 14.88 | 1.01 | 6.1 | 93.9 | 0.0 | -1.25 | 1.23 | 0.64 | 0.82 | 1.41 | 4712 | 619 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 5X5C | 6706 | 2023-11-19 | 2017-02-15 | 4.1 | 4.20 | — | 4.1 | 0.014 | 1.75 | 3.0 | 0.08 | 14.64 | 0.01 | 1.435 | 30.55 | 5.82 | 13.2 | 85.6 | 1.2 | -3.80 | 0.65 | 0.57 | — | 4.1 | 0.004 | 0.96 | 0.0 | 0.05 | 13.03 | 0.01 | 2.034 | 19.12 | 0.07 | 12.9 | 86.9 | 0.2 | -2.46 | 1.55 | 0.72 | 0.71 | — | 26418 | 3423 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DBR | 7848 | 2023-11-16 | 2018-05-03 | 4.0 | 4.12 | — | 4.0 | 0.005 | 1.05 | 3.0 | 0.05 | 21.17 | 0.01 | 1.376 | 19.29 | 0.25 | 7.9 | 92.0 | 0.1 | -4.14 | 0.80 | 0.82 | — | 4.0 | 0.003 | 0.73 | 0.0 | 0.04 | 21.54 | 0.00 | 2.144 | 16.41 | 0.32 | 5.6 | 94.3 | 0.1 | -1.31 | 1.50 | 0.80 | 0.82 | — | 17040 | 1794 | 10 | 136 | 6 | 0 | 0 | logfile |
✔ | 7N28 | 24128 | 2023-11-20 | 2021-05-28 | 4.2 | 4.38 | 4.07 | 4.2 | 0.005 | 0.74 | 1.0 | 0.06 | 14.29 | 0.00 | 2.103 | 12.05 | 0.16 | 7.9 | 92.1 | 0.0 | -1.88 | 0.85 | 0.79 | — | 4.2 | 0.003 | 0.63 | 0.0 | 0.05 | 14.22 | 0.00 | 2.051 | 11.69 | 0.06 | 6.8 | 93.2 | 0.0 | -1.52 | 0.37 | 0.85 | 0.79 | — | 29461 | 3523 | 58 | 0 | 140 | 0 | 0 | logfile |
✔ | 7ARB | 11878 | 2023-11-15 | 2020-10-23 | 3.41 | 3.20 | — | 3.2 | 0.004 | 0.65 | 2.0 | 0.07 | 13.95 | 0.00 | 1.982 | 8.37 | 0.02 | 3.8 | 96.1 | 0.1 | 0.49 | 0.78 | 0.85 | 3.13 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.029 | 7.92 | 0.09 | 3.3 | 96.7 | 0.0 | 0.94 | 1.91 | 0.81 | 0.88 | 2.71 | 61765 | 7716 | 66 | 0 | 55 | 0 | 0 | logfile |
✔ | 6AB5 | 6999 | 2023-11-21 | 2018-07-20 | 3.7 | 3.79 | — | 3.7 | 0.007 | 0.96 | 6.0 | 0.06 | 11.27 | 0.01 | 1.686 | 24.89 | 0.75 | 5.6 | 94.4 | 0.0 | -3.80 | 0.85 | 0.86 | 3.48 | 3.7 | 0.007 | 0.66 | 0.0 | 0.05 | 14.07 | 0.00 | 2.100 | 12.10 | 0.29 | 7.2 | 92.8 | 0.0 | -2.04 | 0.62 | 0.87 | 0.87 | 2.34 | 139740 | 18180 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q9F | 13868 | 2023-11-21 | 2021-11-12 | 3.6 | 3.95 | — | 3.7 | 0.004 | 0.51 | 0.0 | 0.04 | 9.26 | 0.00 | 1.941 | 4.46 | 0.45 | 3.9 | 96.1 | 0.0 | 0.15 | 0.88 | 0.86 | 2.34 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 12.62 | 0.00 | 2.113 | 10.88 | 0.11 | 4.6 | 95.4 | 0.0 | 0.10 | 1.03 | 0.88 | 0.86 | 1.98 | 34264 | 4312 | 29 | 0 | 64 | 0 | 0 | logfile |
✔ | 7Y24 | 33585 | 2023-11-14 | 2022-06-09 | 3.25 | 3.61 | 3.34 | 3.6 | 0.004 | 0.68 | 2.0 | 0.06 | 12.92 | 0.00 | 2.208 | 12.97 | 0.37 | 3.0 | 97.0 | 0.0 | 0.69 | 0.61 | 0.73 | 1.83 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 15.21 | 0.00 | 2.227 | 12.72 | 0.25 | 3.1 | 96.9 | 0.0 | 0.78 | 1.19 | 0.62 | 0.76 | 1.47 | 8229 | 1127 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SNi | 25227 | 2023-11-16 | 2021-10-28 | 2.5 | 2.71 | — | 2.8 | 0.006 | 0.74 | 0.0 | 0.05 | 17.05 | 0.00 | 2.239 | 8.51 | 0.06 | 2.1 | 97.9 | 0.0 | -0.02 | 0.71 | 0.80 | 3.21 | 2.8 | 0.005 | 0.62 | 0.0 | 0.05 | 18.35 | 0.00 | 2.007 | 12.96 | 1.40 | 2.6 | 97.4 | 0.0 | -0.29 | 0.36 | 0.68 | 0.81 | 3.49 | 16533 | 1952 | 12 | 0 | 12 | 233 | 0 | logfile |
✔ | 7WF4 | 32460 | 2023-11-18 | 2021-12-25 | 3.4 | 2.86 | — | 2.8 | 0.009 | 1.05 | 8.0 | 0.07 | 13.55 | 0.01 | 2.085 | 6.38 | 6.01 | 3.8 | 95.7 | 0.4 | -1.41 | 0.61 | 0.73 | 3.58 | 2.8 | 0.005 | 0.63 | 0.0 | 0.04 | 14.81 | 0.00 | 2.090 | 4.97 | 0.47 | 3.2 | 96.4 | 0.4 | 0.69 | 1.41 | 0.71 | 0.85 | 3.65 | 22143 | 2760 | 25 | 0 | 7 | 100 | 0 | logfile |
✔ | 8Q9i | 18282 | 2023-11-13 | 2023-08-20 | 2.56 | 2.01 | 2.38 | 2.2 | 0.011 | 1.80 | 0.0 | 0.08 | 11.44 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -1.34 | 0.29 | 0.75 | 7.51 | 2.3 | 0.003 | 0.57 | 0.0 | 0.05 | 17.83 | 0.00 | 2.169 | 1.76 | 0.00 | 0.5 | 99.5 | 0.0 | -1.49 | 4.60 | 0.38 | 0.87 | 7.68 | 3411 | 219 | 3 | 0 | 0 | 0 | 1740 | logfile |
✔ | 6KFG | 9972 | 2023-11-18 | 2019-07-07 | 3.8 | 3.91 | — | 3.9 | 0.007 | 0.77 | 0.0 | 0.05 | 14.04 | 0.00 | 2.148 | 13.10 | 0.67 | 11.5 | 88.5 | 0.0 | -4.38 | 0.63 | 0.82 | 1.64 | 3.9 | 0.005 | 0.78 | 0.0 | 0.04 | 16.41 | 0.00 | 2.166 | 13.65 | 1.09 | 8.9 | 91.1 | 0.0 | -0.56 | 1.36 | 0.63 | 0.82 | 1.37 | 22264 | 2704 | 8 | 0 | 0 | 0 | 0 | logfile |