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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D43 | 27173 | 2022-12-11 | 2022-06-01 | 2.88 | 3.12 | 2.94 | 5.9 | 0.004 | 0.83 | 1.0 | 0.06 | 18.40 | 0.01 | 1.371 | 8.69 | 5.48 | 6.5 | 93.5 | 0.0 | -1.48 | 0.17 | -0.02 | 0.37 | 3.2 | 0.005 | 0.95 | 0.0 | 0.05 | 18.69 | 0.01 | 2.034 | 23.70 | 2.86 | 9.6 | 90.3 | 0.1 | -1.97 | 2.70 | 0.43 | 0.38 | 1.05 | 7763 | 962 | 5 | 0 | 6 | 1 | 0 | logfile |
✔ | 7URi | 26713 | 2022-12-11 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.007 | 1.42 | 0.0 | 0.07 | 23.80 | 0.01 | 2.074 | 24.37 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.69 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7PC2 | 13316 | 2022-12-15 | 2021-08-03 | 2.8 | 3.39 | — | 6.5 | 0.033 | 1.53 | 5.0 | 0.05 | 15.16 | 0.01 | 1.809 | 9.01 | 1.49 | 7.8 | 92.2 | 0.0 | -3.81 | 0.43 | 0.05 | -0.14 | 3.1 | 0.011 | 0.95 | 0.0 | 0.05 | 16.36 | 0.01 | 2.036 | 16.86 | 2.94 | 6.3 | 93.7 | 0.0 | -1.20 | 1.45 | 0.59 | 0.38 | 0.38 | 27063 | 3093 | 68 | 0 | 210 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2022-12-11 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 180.45 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.0 | 0.004 | 1.18 | 0.0 | 0.05 | 17.18 | 0.01 | 2.023 | 26.84 | 0.49 | 9.4 | 89.6 | 1.0 | -2.22 | 1.72 | 0.31 | 0.41 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TTS | 26122 | 2022-12-14 | 2022-02-01 | 2.9 | 12.34 | — | — | 0.008 | 0.99 | 1.0 | 0.08 | 12.67 | 0.01 | 1.788 | 5.67 | 0.30 | 3.2 | 96.6 | 0.1 | 1.89 | 0.77 | 0.55 | -0.20 | — | 0.004 | 0.64 | 0.0 | 0.04 | 13.61 | 0.00 | 1.810 | 24.11 | 0.36 | 3.6 | 96.3 | 0.1 | 2.08 | 1.02 | 0.70 | 0.41 | -0.20 | 18793 | 2686 | 12 | 0 | 23 | 0 | 0 | logfile |
✔ | 7NK1 | 12428 | 2022-12-16 | 2021-02-17 | 4.22 | 4.30 | — | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 13.56 | 0.01 | 1.907 | 9.03 | 0.19 | 4.3 | 95.7 | 0.0 | -0.71 | 0.46 | 0.19 | — | 4.4 | 0.003 | 0.68 | 0.0 | 0.04 | 14.21 | 0.01 | 1.876 | 21.64 | 0.00 | 5.9 | 94.1 | 0.0 | -1.46 | 1.21 | 0.62 | 0.41 | — | 28747 | 1791 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7APK | 11857 | 2022-12-14 | 2020-10-17 | 3.3 | 3.26 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 8.50 | 0.01 | 2.256 | 4.14 | 0.10 | 4.7 | 95.2 | 0.1 | -2.73 | 0.41 | 0.22 | 0.13 | 2.9 | 0.005 | 0.75 | 0.0 | 0.04 | 12.98 | 0.00 | 2.104 | 13.12 | 0.18 | 6.2 | 93.7 | 0.1 | 1.08 | 1.15 | 0.50 | 0.44 | 1.00 | 72697 | 9893 | 30 | 0 | 74 | 0 | 0 | logfile |
✔ | 7Woo | 32653 | 2022-12-13 | 2022-01-22 | 3.71 | 4.08 | — | 3.9 | 0.010 | 1.69 | 139.0 | 0.10 | 15.86 | 0.01 | 1.041 | 23.20 | 4.33 | 9.3 | 88.5 | 2.2 | -3.11 | 0.47 | 0.44 | 0.31 | 3.9 | 0.003 | 0.80 | 0.0 | 0.04 | 16.41 | 0.00 | 2.026 | 14.26 | 0.37 | 7.9 | 91.8 | 0.3 | -0.29 | 1.64 | 0.47 | 0.44 | 0.12 | 66949 | 8644 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 1oED | 1044 | 2022-12-11 | 2003-03-24 | 4.0 | 3.94 | — | 10.4 | 0.014 | 2.29 | 3.0 | 0.10 | 17.23 | 0.01 | 1.183 | 225.04 | 19.76 | 5.2 | 92.7 | 2.1 | -3.67 | 0.39 | 0.18 | — | 9.0 | 0.004 | 1.03 | 0.0 | 0.05 | 15.86 | 0.01 | 2.151 | 21.91 | 0.52 | 2.1 | 97.9 | 0.0 | 1.73 | 2.85 | 0.63 | 0.45 | — | 4926 | 636 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LVT | 23542 | 2022-12-14 | 2021-02-26 | 4.6 | 4.32 | — | 4.0 | 0.008 | 1.36 | 3.0 | 0.09 | 13.04 | 0.01 | 2.057 | 6.46 | 0.96 | 6.4 | 93.3 | 0.3 | -2.96 | 0.68 | 0.65 | — | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 13.28 | 0.00 | 2.012 | 11.37 | 0.00 | 4.5 | 95.3 | 0.1 | 0.38 | 16.94 | 0.55 | 0.45 | — | 18944 | 2876 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2022-12-12 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.34 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.91 | 0.0 | 0.05 | 16.70 | 0.01 | 2.098 | 25.10 | 0.40 | 15.9 | 83.5 | 0.5 | -3.58 | 0.78 | 0.23 | 0.45 | -0.23 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E4C | 27888 | 2022-12-11 | 2022-08-18 | 4.0 | 3.22 | 3.15 | 3.1 | 0.005 | 0.83 | 2.0 | 0.07 | 16.39 | 0.01 | 2.251 | 7.72 | 1.84 | 6.1 | 93.9 | 0.0 | -0.24 | 0.48 | 0.49 | — | 3.1 | 0.003 | 0.71 | 0.0 | 0.04 | 17.00 | 0.01 | 2.202 | 14.74 | 0.42 | 5.7 | 94.3 | 0.0 | -0.13 | 1.26 | 0.47 | 0.46 | — | 6398 | 805 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7MDW | 23782 | 2022-12-11 | 2021-04-06 | 3.58 | 2.25 | 3.45 | 1.5 | 0.002 | 0.54 | 0.0 | 0.04 | 12.63 | 0.00 | 2.293 | 8.46 | 0.00 | 6.5 | 93.5 | 0.0 | -1.58 | 0.52 | 0.44 | 1.65 | 1.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.37 | 0.00 | 2.292 | 11.94 | 0.28 | 7.7 | 92.3 | 0.0 | -2.34 | 0.98 | 0.54 | 0.46 | 1.66 | 3392 | 435 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7JGF | 22325 | 2022-12-11 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.85 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.7 | 0.002 | 0.54 | 0.0 | 0.04 | 13.15 | 0.00 | 2.122 | 55.35 | 0.41 | 7.3 | 92.7 | 0.0 | 0.66 | 0.66 | 0.42 | 0.46 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 6H05 | 0108 | 2022-12-21 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.81 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | 3.1 | 0.003 | 0.86 | 0.0 | 0.04 | 15.56 | 0.00 | 2.134 | 15.94 | 2.28 | 4.3 | 95.7 | 0.0 | -1.34 | 1.63 | 0.58 | 0.47 | 0.65 | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2022-12-12 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.19 | 0.01 | 2.092 | 15.06 | 0.00 | 5.3 | 94.7 | 0.0 | 0.77 | 1.43 | 0.41 | 0.48 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2022-12-16 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 8.5 | 0.004 | 1.01 | 0.0 | 0.05 | 13.22 | 0.01 | 1.497 | 26.00 | 0.00 | 17.4 | 82.2 | 0.4 | -3.46 | 5.55 | 0.82 | 0.49 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AST | 11904 | 2022-12-19 | 2020-10-28 | 4.0 | 3.84 | — | 3.5 | 0.016 | 1.10 | 1.0 | 0.06 | 15.36 | 0.01 | 1.913 | 32.75 | 0.00 | 20.8 | 78.6 | 0.6 | -4.78 | 0.61 | 0.46 | — | 3.5 | 0.016 | 0.97 | 0.0 | 0.05 | 17.45 | 0.01 | 2.108 | 26.40 | 0.37 | 16.4 | 83.3 | 0.3 | -3.59 | 1.41 | 0.64 | 0.49 | — | 34518 | 4365 | 17 | 0 | 36 | 0 | 0 | logfile |
✔ | 7JGJ | 22328 | 2022-12-13 | 2020-07-19 | 4.8 | 7.06 | — | 6.5 | 0.013 | 2.22 | 17.0 | 0.31 | 17.49 | 0.01 | 1.656 | 7.23 | 12.68 | 7.2 | 91.6 | 1.2 | -2.09 | 0.88 | 0.68 | — | 6.5 | 0.003 | 0.76 | 0.0 | 0.04 | 13.59 | 0.00 | 2.150 | 24.66 | 0.07 | 7.7 | 92.3 | 0.1 | -1.86 | 1.25 | 0.84 | 0.49 | — | 13324 | 1707 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RSi | 24672 | 2022-12-12 | 2021-08-11 | 4.9 | 7.04 | 5.29 | 7.8 | 0.015 | 1.51 | 0.0 | 0.07 | 12.44 | 0.01 | 2.015 | 6.36 | 0.00 | 4.5 | 94.6 | 0.9 | -0.32 | 0.82 | 0.69 | — | 7.7 | 0.002 | 0.56 | 0.0 | 0.04 | 12.88 | 0.00 | 1.878 | 13.91 | 0.00 | 5.6 | 94.4 | 0.0 | -0.11 | 1.20 | 0.78 | 0.50 | — | 10886 | 686 | 2 | 0 | 2 | 0 | 5400 | logfile |