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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JC2 | 3245 | 2024-03-10 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.003 | 0.83 | 0.0 | 0.04 | 17.12 | 0.00 | 2.209 | 14.20 | 3.66 | 6.6 | 92.8 | 0.6 | -1.30 | 2.30 | 0.23 | 0.52 | 1.41 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |
✔ | 7Z0L | 14427 | 2024-03-16 | 2022-02-23 | 4.0 | 4.43 | 4.11 | 4.3 | 0.005 | 0.95 | 0.0 | 0.06 | 15.67 | 0.01 | 2.223 | 7.63 | 0.65 | 5.5 | 94.5 | 0.0 | -0.67 | 0.58 | 0.49 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.03 | 0.00 | 2.059 | 12.52 | 2.84 | 3.7 | 96.3 | 0.0 | 0.36 | 0.94 | 0.59 | 0.52 | — | 13752 | 856 | 9 | 0 | 12 | 0 | 6713 | logfile |
✔ | 8CEo | 16611 | 2024-03-12 | 2023-02-02 | 3.6 | 3.26 | 3.48 | 2.9 | 0.004 | 0.75 | 1.0 | 0.05 | 16.42 | 0.01 | 2.091 | 6.70 | 0.00 | 2.9 | 97.1 | 0.0 | -0.68 | 0.73 | 0.56 | 1.54 | 2.9 | 0.005 | 0.65 | 0.0 | 0.04 | 17.82 | 0.00 | 1.893 | 14.64 | 1.52 | 3.2 | 96.8 | 0.0 | 0.59 | 0.66 | 0.68 | 0.52 | 1.44 | 113584 | 13074 | 66 | 418 | 19 | 0 | 0 | logfile |
✔ | 8X5Y | 38075 | 2024-03-10 | 2023-11-20 | 3.0 | 3.88 | 3.52 | 3.9 | 0.013 | 0.90 | 0.0 | 0.05 | 14.80 | 0.01 | 2.346 | 8.21 | 0.40 | 7.5 | 92.5 | 0.0 | -0.78 | 0.38 | 0.58 | 2.00 | 3.9 | 0.005 | 0.79 | 0.0 | 0.04 | 17.13 | 0.00 | 2.177 | 9.94 | 2.81 | 7.8 | 92.2 | 0.0 | -0.11 | 0.31 | 0.32 | 0.53 | 1.42 | 2292 | 274 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 6XAS | 22114 | 2024-03-25 | 2020-06-04 | 3.8 | 3.01 | 3.14 | 2.9 | 0.002 | 0.49 | 0.0 | 0.04 | 11.33 | 0.00 | 1.961 | 4.92 | 1.49 | 2.2 | 97.8 | 0.0 | -2.00 | 0.62 | 0.55 | 1.72 | 3.0 | 0.004 | 0.65 | 0.0 | 0.04 | 14.81 | 0.00 | 1.821 | 8.81 | 1.51 | 4.1 | 95.9 | 0.0 | -0.12 | 0.75 | 0.61 | 0.53 | 1.63 | 46887 | 5804 | 16 | 73 | 3 | 0 | 0 | logfile |
✔ | 7NSU | 12577 | 2024-03-23 | 2021-03-08 | 4.7 | 3.48 | 4.74 | 4.1 | 0.003 | 0.70 | 0.0 | 0.05 | 14.51 | 0.00 | 1.833 | 11.03 | 3.66 | 4.9 | 95.0 | 0.1 | -1.84 | 0.58 | 0.49 | — | 2.4 | 0.003 | 0.66 | 0.0 | 0.05 | 12.88 | 0.00 | 1.674 | 14.98 | 0.16 | 4.1 | 95.9 | 0.0 | -0.91 | 2.57 | 0.60 | 0.53 | — | 36070 | 2410 | 6 | 0 | 0 | 0 | 17527 | logfile |
✔ | 7URM | 26714 | 2024-03-10 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 28.63 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.15 | 0.0 | 0.05 | 27.88 | 0.01 | 2.001 | 29.60 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.67 | 0.15 | 0.53 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 8G6i | 29770 | 2024-03-16 | 2023-02-15 | 4.23 | 4.53 | 4.35 | 4.2 | 0.003 | 0.68 | 0.0 | 0.05 | 13.13 | 0.01 | 2.143 | 10.55 | 0.00 | 9.3 | 90.4 | 0.3 | -3.49 | 0.69 | 0.42 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.05 | 13.86 | 0.00 | 2.177 | 18.67 | 0.00 | 12.8 | 86.9 | 0.3 | -3.82 | 2.53 | 0.73 | 0.53 | — | 13287 | 1665 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7YRR | 34065 | 2024-03-19 | 2022-08-10 | 4.3 | 4.40 | 4.25 | 4.2 | 0.013 | 2.13 | 5.0 | 0.11 | 22.39 | 0.01 | 1.874 | 15.92 | 26.25 | 21.4 | 73.0 | 5.6 | -5.95 | 0.67 | 0.46 | — | 4.2 | 0.014 | 0.93 | 0.0 | 0.04 | 14.50 | 0.01 | 1.870 | 36.32 | 0.13 | 18.5 | 80.8 | 0.7 | -4.57 | 1.26 | 0.70 | 0.53 | — | 24937 | 1697 | 4 | 0 | 0 | 0 | 11408 | logfile |
✔ | 7JLX | 22383 | 2024-03-10 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GHU | 40051 | 2024-03-25 | 2023-03-12 | 3.0 | 3.91 | 2.97 | 3.6 | 0.006 | 0.74 | 4.0 | 0.06 | 22.44 | 0.00 | 2.190 | 7.98 | 3.01 | 11.1 | 88.9 | 0.1 | -4.69 | 0.72 | 0.52 | 0.96 | 3.6 | 0.005 | 0.66 | 0.0 | 0.03 | 23.51 | 0.00 | 1.438 | 15.75 | 3.80 | 7.7 | 92.3 | 0.0 | -2.98 | 1.60 | 0.75 | 0.53 | 1.73 | 47408 | 1828 | 20 | 1531 | 84 | 0 | 0 | logfile |
✔ | 6YRG | 10889 | 2024-03-18 | 2020-04-20 | 4.8 | 6.94 | — | 7.9 | 0.009 | 1.41 | 18.0 | 0.08 | 13.69 | 0.01 | 1.270 | 31.61 | 0.48 | 9.4 | 90.3 | 0.3 | -2.26 | 0.66 | 0.32 | — | 7.8 | 0.003 | 0.73 | 0.0 | 0.04 | 12.90 | 0.00 | 2.145 | 14.98 | 0.00 | 10.1 | 89.7 | 0.1 | -1.36 | 3.44 | 0.75 | 0.53 | — | 21992 | 2736 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LKH | 4068 | 2024-03-23 | 2016-07-22 | 3.46 | 5.27 | — | 11.0 | 0.018 | 2.37 | 65.0 | 0.12 | 12.66 | 0.02 | 2.255 | 87.12 | 1.96 | 3.4 | 95.2 | 1.4 | -0.27 | 0.38 | 0.17 | -0.03 | 8.8 | 0.005 | 0.87 | 0.0 | 0.04 | 15.69 | 0.00 | 1.528 | 24.67 | 2.06 | 5.7 | 94.2 | 0.0 | -0.64 | 2.00 | 0.50 | 0.54 | 0.14 | 37345 | 4740 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EGA | 31110 | 2024-03-18 | 2021-03-24 | 4.1 | 4.55 | — | 4.1 | 0.008 | 1.08 | 35.0 | 0.07 | 16.94 | 0.01 | 1.445 | 18.65 | 3.89 | 6.5 | 93.1 | 0.4 | -3.75 | 0.60 | 0.28 | — | 3.9 | 0.004 | 0.70 | 0.0 | 0.04 | 15.59 | 0.00 | 1.926 | 14.87 | 0.00 | 5.5 | 94.4 | 0.1 | -0.43 | 1.37 | 0.74 | 0.54 | — | 85697 | 10273 | 49 | 170 | 11 | 0 | 0 | logfile |
✔ | 8ENQ | 28276 | 2024-03-10 | 2022-09-30 | 3.6 | 3.97 | 3.73 | 4.4 | 0.004 | 0.77 | 0.0 | 0.05 | 13.93 | 0.00 | 2.257 | 14.40 | 0.00 | 0.3 | 99.7 | 0.0 | 1.45 | 0.35 | 0.32 | 1.15 | 4.2 | 0.007 | 1.22 | 0.0 | 0.05 | 16.63 | 0.01 | 2.036 | 40.94 | 3.57 | 19.7 | 80.3 | 0.0 | -4.84 | 2.02 | 0.47 | 0.54 | 3.33 | 5593 | 777 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XAQ | 33097 | 2024-03-19 | 2022-03-18 | 3.59 | 4.39 | — | 4.3 | 0.007 | 1.02 | 1.0 | 0.05 | 23.46 | 0.01 | 1.800 | 11.83 | 2.87 | 11.8 | 87.9 | 0.3 | -4.12 | 0.78 | 0.53 | 0.56 | 3.4 | 0.004 | 0.82 | 0.0 | 0.04 | 24.08 | 0.01 | 1.994 | 24.67 | 3.46 | 8.4 | 91.4 | 0.3 | -1.27 | 0.90 | 0.77 | 0.54 | 0.46 | 13396 | 1197 | 10 | 172 | 0 | 0 | 0 | logfile |
✔ | 8K0B | 36759 | 2024-03-10 | 2023-07-08 | 3.56 | 2.51 | 3.58 | 1.9 | 0.004 | 0.86 | 2.0 | 0.05 | 17.34 | 0.00 | 2.195 | 14.96 | 1.28 | 8.0 | 92.0 | 0.0 | -0.63 | 0.53 | 0.53 | 0.79 | 2.0 | 0.004 | 0.78 | 0.0 | 0.04 | 17.55 | 0.00 | 2.156 | 15.66 | 6.39 | 8.3 | 91.7 | 0.0 | -0.41 | 0.44 | 0.54 | 0.54 | 0.38 | 5689 | 689 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCH | 12266 | 2024-03-15 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.004 | 0.75 | 2.0 | 0.05 | 15.90 | 0.00 | 1.890 | 15.09 | 2.59 | 14.8 | 85.2 | 0.0 | -4.71 | 1.67 | 0.65 | 0.54 | 2.02 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 6oFJ | 20047 | 2024-03-15 | 2019-03-30 | 4.5 | 5.60 | 3.27 | 7.8 | 0.007 | 0.96 | 0.0 | 0.05 | 15.74 | 0.01 | 2.135 | 3.69 | 0.00 | 7.1 | 92.9 | 0.0 | -4.36 | 0.48 | 0.33 | — | 7.8 | 0.002 | 0.59 | 0.0 | 0.04 | 14.31 | 0.00 | 2.135 | 7.57 | 0.00 | 8.4 | 91.6 | 0.0 | -1.96 | 1.18 | 0.56 | 0.54 | — | 10310 | 650 | 2 | 0 | 0 | 0 | 5142 | logfile |
✔ | 8BC1 | 15959 | 2024-03-11 | 2022-10-14 | 2.93 | 3.48 | 2.73 | 3.5 | 0.002 | 0.46 | 0.0 | 0.04 | 10.38 | 0.00 | 2.265 | 7.96 | 3.43 | 2.9 | 97.1 | 0.0 | 1.53 | 0.38 | 0.52 | 1.52 | 3.5 | 0.003 | 0.77 | 0.0 | 0.04 | 15.38 | 0.00 | 2.154 | 14.59 | 2.57 | 3.6 | 96.4 | 0.0 | 0.74 | 0.98 | 0.39 | 0.54 | 1.19 | 8684 | 1054 | 4 | 0 | 6 | 0 | 0 | logfile |