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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7U12 | 26275 | 2024-03-10 | 2022-02-19 | 3.5 | 3.59 | — | 4.4 | 0.011 | 1.06 | 0.0 | 0.07 | 16.72 | 0.01 | 2.160 | 20.06 | 5.51 | 8.0 | 92.0 | 0.0 | -3.00 | 0.29 | 0.45 | 2.77 | 4.3 | 0.004 | 0.82 | 0.0 | 0.06 | 15.16 | 0.00 | 2.205 | 11.72 | 3.94 | 9.3 | 90.7 | 0.0 | -3.74 | 2.89 | 0.33 | 0.56 | 2.09 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8DRQ | 27681 | 2024-03-10 | 2022-07-21 | 4.16 | 4.28 | 4.60 | 4.1 | 0.004 | 0.89 | 0.0 | 0.05 | 15.60 | 0.01 | 2.283 | 15.85 | 0.00 | 5.9 | 94.1 | 0.0 | -3.30 | 0.39 | 0.56 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.05 | 13.36 | 0.01 | 2.086 | 24.08 | 0.00 | 7.7 | 92.3 | 0.0 | -2.83 | 1.99 | 0.42 | 0.56 | — | 3321 | 407 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NVR | 12610 | 2024-03-19 | 2021-03-15 | 4.5 | 4.38 | 4.40 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 15.04 | 0.00 | 1.807 | 8.62 | 0.01 | 3.9 | 96.0 | 0.0 | 0.72 | 0.75 | 0.57 | — | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 15.33 | 0.00 | 1.981 | 14.51 | 0.02 | 4.5 | 95.5 | 0.0 | 0.40 | 1.67 | 0.75 | 0.56 | — | 96126 | 11548 | 71 | 128 | 157 | 0 | 0 | logfile |
✔ | 7NiU | 12365 | 2024-03-16 | 2021-02-14 | 4.2 | 3.68 | — | 3.5 | 0.008 | 1.01 | 0.0 | 0.05 | 16.08 | 0.01 | 2.110 | 34.12 | 1.67 | 14.7 | 85.0 | 0.2 | -5.18 | 0.57 | 0.58 | — | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 14.55 | 0.00 | 2.136 | 13.82 | 0.12 | 6.3 | 93.7 | 0.0 | -1.75 | 2.21 | 0.56 | 0.56 | — | 15495 | 2015 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8iER | 35391 | 2024-03-16 | 2023-02-15 | 4.87 | 5.08 | 4.32 | 4.9 | 0.002 | 0.53 | 0.0 | 0.04 | 12.91 | 0.00 | 1.978 | 6.35 | 0.00 | 7.4 | 92.3 | 0.3 | -0.61 | 0.48 | 0.46 | — | 4.9 | 0.002 | 0.56 | 0.0 | 0.04 | 12.81 | 0.00 | 1.919 | 8.70 | 0.00 | 10.5 | 89.2 | 0.3 | -1.03 | 1.27 | 0.52 | 0.56 | — | 15257 | 967 | 2 | 0 | 1 | 0 | 7758 | logfile |
✔ | 7X3J | 32989 | 2024-03-12 | 2022-03-01 | 4.2 | 3.84 | 4.27 | 3.9 | 0.004 | 0.86 | 1.0 | 0.05 | 14.40 | 0.00 | 1.136 | 5.37 | 0.10 | 3.2 | 96.8 | 0.0 | -5.53 | 0.59 | 0.53 | — | 3.9 | 0.002 | 0.64 | 0.0 | 0.04 | 14.37 | 0.00 | 1.950 | 11.21 | 0.03 | 3.5 | 96.5 | 0.0 | -0.47 | 1.58 | 0.60 | 0.56 | — | 63188 | 8209 | 32 | 0 | 16 | 0 | 0 | logfile |
✔ | 6QVD | 4649 | 2024-03-14 | 2019-03-01 | 4.34 | 5.50 | 4.28 | 6.0 | 0.010 | 1.81 | 8.0 | 0.10 | 12.96 | 0.01 | 2.193 | 12.88 | 3.61 | 9.6 | 90.1 | 0.3 | -4.01 | 0.68 | 0.75 | — | 6.0 | 0.003 | 0.87 | 0.0 | 0.05 | 12.13 | 0.00 | 2.143 | 16.83 | 0.00 | 8.2 | 91.6 | 0.2 | -0.57 | 1.38 | 0.62 | 0.56 | — | 9212 | 1192 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AFM | 15402 | 2024-03-11 | 2022-07-18 | 4.8 | 3.13 | 4.72 | 3.9 | 0.004 | 0.74 | 0.0 | 0.04 | 15.27 | 0.00 | 2.153 | 18.43 | 0.25 | 8.2 | 91.8 | 0.0 | -3.48 | 0.46 | 0.51 | — | 3.0 | 0.003 | 0.73 | 0.0 | 0.04 | 15.59 | 0.00 | 2.101 | 13.44 | 0.00 | 4.0 | 96.0 | 0.0 | -0.87 | 2.12 | 0.48 | 0.56 | — | 7842 | 1010 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 3LoS | 5137 | 2024-03-12 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 87.93 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.005 | 1.29 | 0.0 | 0.06 | 15.90 | 0.01 | 2.091 | 33.18 | 0.00 | 21.9 | 74.2 | 3.9 | -4.38 | 1.32 | 0.63 | 0.56 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FiJ | 31599 | 2024-03-10 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.3 | 0.006 | 0.86 | 0.0 | 0.05 | 12.15 | 0.00 | 2.164 | 13.33 | 11.25 | 16.5 | 83.5 | 0.0 | -1.70 | 0.74 | 0.62 | 0.56 | 2.72 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FTE | 29424 | 2024-03-16 | 2023-01-12 | 3.8 | 3.91 | 3.67 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 12.35 | 0.00 | 2.203 | 12.31 | 5.56 | 3.4 | 96.6 | 0.0 | 0.06 | 0.48 | 0.50 | 0.06 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 14.54 | 0.00 | 2.128 | 7.29 | 5.11 | 6.0 | 94.0 | 0.0 | 1.70 | 1.58 | 0.55 | 0.56 | 0.45 | 14564 | 2046 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CR9 | 16805 | 2024-03-11 | 2023-03-08 | 4.2 | 3.61 | 4.06 | 4.0 | 0.013 | 1.97 | 3.0 | 0.10 | 14.42 | 0.02 | 2.568 | 0.46 | 2.87 | 9.6 | 89.0 | 1.4 | -2.67 | 0.57 | 0.61 | — | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 13.81 | 0.01 | 2.045 | 8.82 | 0.00 | 10.4 | 89.2 | 0.4 | -2.58 | 1.07 | 0.56 | 0.57 | — | 8621 | 571 | 3 | 0 | 0 | 0 | 4272 | logfile |
✔ | 8BVW | 16274 | 2024-03-18 | 2022-12-20 | 4.0 | 3.84 | 3.33 | 3.4 | 0.006 | 0.90 | 0.0 | 0.05 | 17.06 | 0.01 | 1.730 | 5.60 | 0.06 | 3.1 | 96.9 | 0.0 | -0.71 | 0.71 | 0.56 | — | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 18.66 | 0.00 | 1.973 | 11.02 | 1.10 | 2.7 | 97.3 | 0.0 | 0.82 | 0.61 | 0.71 | 0.57 | — | 84783 | 9510 | 54 | 412 | 46 | 0 | 0 | logfile |
✔ | 8GUD | 34273 | 2024-03-11 | 2022-09-11 | 2.62 | 2.98 | 2.83 | 3.1 | 0.008 | 0.79 | 0.0 | 0.05 | 14.85 | 0.01 | 2.116 | 20.31 | 0.00 | 6.0 | 94.0 | 0.0 | -2.12 | 0.52 | 0.56 | 1.45 | 3.1 | 0.005 | 0.75 | 0.0 | 0.05 | 17.31 | 0.00 | 2.114 | 20.39 | 3.43 | 7.5 | 92.5 | 0.0 | -1.77 | 0.35 | 0.49 | 0.57 | 1.52 | 6814 | 835 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6ZFo | 11184 | 2024-03-17 | 2020-06-17 | 4.4 | 4.43 | — | 4.4 | 0.003 | 0.56 | 0.0 | 0.04 | 10.43 | 0.00 | 2.157 | 3.58 | 1.30 | 4.5 | 95.5 | 0.0 | -0.66 | 0.49 | 0.51 | — | 4.4 | 0.003 | 0.63 | 0.0 | 0.04 | 11.52 | 0.00 | 1.918 | 12.94 | 0.00 | 6.1 | 93.9 | 0.0 | -1.37 | 1.59 | 0.52 | 0.57 | — | 18988 | 1252 | 8 | 0 | 2 | 0 | 9310 | logfile |
✔ | 7X6U | 33027 | 2024-03-24 | 2022-03-08 | 4.5 | 4.59 | 4.67 | 4.5 | 0.004 | 0.94 | 0.0 | 0.05 | 13.23 | 0.01 | 0.507 | 29.62 | 0.00 | 10.1 | 89.3 | 0.6 | -3.46 | 0.38 | 0.58 | — | 4.5 | 0.005 | 0.89 | 0.0 | 0.05 | 13.23 | 0.01 | 2.142 | 21.52 | 0.00 | 12.0 | 87.6 | 0.3 | -3.35 | 0.54 | 0.38 | 0.57 | — | 39324 | 5328 | 24 | 0 | 30 | 0 | 0 | logfile |
✔ | 8X5X | 38074 | 2024-03-10 | 2023-11-20 | 3.5 | 3.67 | 4.06 | 3.8 | 0.004 | 0.77 | 0.0 | 0.04 | 14.15 | 0.00 | 2.094 | 14.97 | 0.43 | 5.3 | 94.7 | 0.0 | 1.03 | 0.42 | 0.53 | 1.42 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 17.57 | 0.00 | 2.257 | 12.40 | 4.31 | 4.9 | 95.1 | 0.0 | 1.16 | 0.80 | 0.44 | 0.57 | 0.33 | 2105 | 256 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CS1 | 7579 | 2024-03-20 | 2018-03-19 | 4.6 | 4.79 | 4.84 | 6.8 | 0.006 | 0.92 | 0.0 | 0.06 | 13.39 | 0.01 | 2.229 | 7.26 | 0.00 | 7.2 | 92.8 | 0.0 | -4.20 | 0.61 | 0.31 | — | 4.6 | 0.004 | 0.84 | 0.0 | 0.05 | 11.48 | 0.01 | 1.983 | 23.93 | 0.00 | 9.1 | 90.9 | 0.0 | -2.58 | 1.88 | 0.71 | 0.57 | — | 25995 | 3202 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2024-03-14 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 12.06 | 0.00 | 2.092 | 22.70 | 0.00 | 6.5 | 93.4 | 0.1 | -0.69 | 2.09 | 0.46 | 0.57 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HDZ | 34684 | 2024-03-15 | 2022-11-07 | 3.05 | 3.28 | 3.11 | 3.3 | 0.002 | 0.44 | 0.0 | 0.04 | 13.94 | 0.00 | 2.174 | 9.75 | 0.00 | 4.3 | 95.7 | 0.1 | 0.18 | 0.49 | 0.48 | 0.43 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 16.12 | 0.00 | 2.083 | 14.74 | 2.01 | 4.8 | 95.1 | 0.1 | -0.26 | 1.02 | 0.54 | 0.57 | 0.70 | 11861 | 1457 | 3 | 0 | 0 | 0 | 0 | logfile |