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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8JAF | 36126 | 2024-03-10 | 2023-05-05 | 3.1 | 2.18 | 3.07 | 1.5 | 0.008 | 0.97 | 0.0 | 0.05 | 12.50 | 0.01 | 2.237 | 17.42 | 0.87 | 7.3 | 92.7 | 0.0 | -2.04 | 0.64 | 0.56 | 4.02 | 1.9 | 0.004 | 0.69 | 0.0 | 0.04 | 13.15 | 0.01 | 2.231 | 14.27 | 2.91 | 5.6 | 94.4 | 0.0 | -1.42 | 0.46 | 0.66 | 0.58 | 2.61 | 3862 | 549 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CEN | 16610 | 2024-03-21 | 2023-02-02 | 3.0 | 2.82 | 2.90 | 2.6 | 0.004 | 0.80 | 1.0 | 0.05 | 14.49 | 0.01 | 2.160 | 5.96 | 0.05 | 2.9 | 97.1 | 0.0 | -0.65 | 0.64 | 0.53 | 1.80 | 2.6 | 0.006 | 0.71 | 0.0 | 0.04 | 16.39 | 0.00 | 2.038 | 13.13 | 1.33 | 3.1 | 96.9 | 0.0 | 0.61 | 1.30 | 0.67 | 0.59 | 2.11 | 101943 | 12311 | 58 | 146 | 19 | 0 | 0 | logfile |
✔ | 6PWC | 20505 | 2024-03-10 | 2019-07-22 | 4.9 | 5.55 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.05 | 4.68 | 0.01 | 2.345 | 2.19 | 0.00 | 1.3 | 98.7 | 0.0 | -0.09 | 0.61 | 0.67 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.04 | 6.37 | 0.00 | 2.094 | 19.59 | 0.00 | 7.2 | 92.8 | 0.0 | -0.38 | 1.57 | 0.61 | 0.59 | — | 5879 | 1055 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU1 | 3956 | 2024-03-24 | 2017-10-27 | 3.4 | 3.40 | — | 6.6 | 0.005 | 1.14 | 0.0 | 0.06 | 13.02 | 0.01 | 1.732 | 6.52 | 0.50 | 16.1 | 83.5 | 0.4 | -5.70 | 0.20 | 0.01 | 0.29 | 3.4 | 0.009 | 1.12 | 3.0 | 0.06 | 16.74 | 0.01 | 1.632 | 25.08 | 2.23 | 17.0 | 82.7 | 0.3 | -3.97 | 1.80 | 0.61 | 0.59 | 0.63 | 40547 | 5012 | 24 | 43 | 7 | 0 | 0 | logfile |
✔ | 8AFL | 15401 | 2024-03-10 | 2022-07-18 | 4.4 | 3.03 | 4.24 | 2.2 | 0.004 | 0.74 | 0.0 | 0.04 | 15.27 | 0.00 | 2.153 | 18.68 | 0.25 | 8.4 | 91.6 | 0.0 | -3.48 | 0.59 | 0.59 | — | 2.1 | 0.004 | 0.73 | 0.0 | 0.04 | 15.42 | 0.00 | 2.158 | 16.25 | 0.00 | 6.5 | 93.5 | 0.0 | -1.48 | 0.80 | 0.59 | 0.59 | — | 3921 | 505 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X6o | 33024 | 2024-03-18 | 2022-03-07 | 3.5 | 2.65 | — | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 8.09 | 0.00 | 2.283 | 3.17 | 1.82 | 2.0 | 98.0 | 0.0 | -3.07 | 0.60 | 0.53 | 0.73 | 2.1 | 0.004 | 0.79 | 0.0 | 0.05 | 12.77 | 0.00 | 2.040 | 18.49 | 2.11 | 4.3 | 95.7 | 0.0 | -0.99 | 1.57 | 0.64 | 0.59 | 1.13 | 21609 | 2787 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q2N | 20575 | 2024-03-16 | 2019-08-08 | 4.4 | 4.43 | — | 4.3 | 0.008 | 1.24 | 0.0 | 0.06 | 9.78 | 0.01 | 1.449 | 11.01 | 0.68 | 9.6 | 90.2 | 0.2 | -4.25 | 0.60 | 0.56 | — | 4.3 | 0.005 | 0.87 | 0.0 | 0.05 | 11.81 | 0.01 | 1.996 | 22.10 | 0.00 | 12.0 | 88.0 | 0.1 | -2.96 | 0.97 | 0.62 | 0.59 | — | 13140 | 1678 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7R4Q | 14314 | 2024-03-25 | 2022-02-09 | 3.6 | 3.14 | — | 5.7 | 0.022 | 3.26 | 109.0 | 0.39 | 16.09 | 0.02 | 1.450 | 30.29 | 3.30 | 8.7 | 91.1 | 0.2 | -2.35 | 0.48 | 0.21 | -0.05 | 4.0 | 0.011 | 1.13 | 8.0 | 0.17 | 15.41 | 0.01 | 1.786 | 28.61 | 1.65 | 8.9 | 91.0 | 0.1 | -2.25 | 1.78 | 0.64 | 0.59 | 0.51 | 51420 | 3414 | 13 | 0 | 43 | 0 | 24182 | logfile |
✔ | 7X2V | 32972 | 2024-03-11 | 2022-02-26 | 3.09 | 2.34 | — | 2.1 | 0.007 | 0.93 | 0.0 | 0.05 | 11.89 | 0.01 | 2.115 | 6.17 | 0.10 | 5.5 | 94.5 | 0.0 | -0.89 | 0.65 | 0.60 | 1.40 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.18 | 0.00 | 2.215 | 12.46 | 2.08 | 5.3 | 94.7 | 0.0 | 0.08 | 0.45 | 0.63 | 0.59 | 1.03 | 8755 | 1122 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RUo | 10007 | 2024-03-25 | 2019-05-28 | 3.5 | 3.56 | — | 4.0 | 0.007 | 1.05 | 0.0 | 0.06 | 13.25 | 0.01 | 2.170 | 7.99 | 0.40 | 10.5 | 89.4 | 0.1 | -4.99 | 0.53 | 0.29 | 0.05 | 3.5 | 0.004 | 0.79 | 0.0 | 0.05 | 17.43 | 0.00 | 2.067 | 17.49 | 2.27 | 7.0 | 93.0 | 0.0 | -2.45 | 2.40 | 0.67 | 0.59 | 0.54 | 50792 | 6086 | 26 | 93 | 8 | 0 | 0 | logfile |
✔ | 8CTJ | 26992 | 2024-03-10 | 2022-05-15 | 4.74 | 4.27 | 4.78 | 5.3 | 0.005 | 0.92 | 0.0 | 0.05 | 14.67 | 0.01 | 2.233 | 6.13 | 0.00 | 4.6 | 95.4 | 0.0 | -0.72 | 0.43 | 0.48 | — | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 14.72 | 0.00 | 2.098 | 15.69 | 0.00 | 5.8 | 94.2 | 0.0 | 0.16 | 1.85 | 0.50 | 0.59 | — | 3312 | 401 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CEE | 16607 | 2024-03-25 | 2023-02-01 | 3.7 | 2.86 | 3.60 | 3.0 | 0.009 | 1.55 | 15.0 | 0.11 | 23.57 | 0.02 | 1.876 | 8.95 | 3.87 | 5.9 | 93.2 | 0.9 | -3.17 | 0.47 | 0.65 | 1.30 | 2.9 | 0.005 | 0.82 | 0.0 | 0.04 | 23.50 | 0.01 | 1.990 | 18.67 | 3.15 | 5.8 | 94.0 | 0.2 | -0.85 | 1.13 | 0.49 | 0.59 | 1.20 | 51964 | 2928 | 22 | 1340 | 0 | 0 | 0 | logfile |
✔ | 5Li4 | 4052 | 2024-03-18 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.07 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.1 | 0.005 | 1.06 | 2.0 | 0.05 | 13.91 | 0.01 | 2.083 | 35.87 | 0.00 | 16.6 | 82.5 | 0.9 | -3.94 | 4.20 | 0.34 | 0.59 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6P49 | 20247 | 2024-03-14 | 2019-05-26 | 3.3 | 3.60 | 3.10 | 3.6 | 0.007 | 1.50 | 0.0 | 0.08 | 16.18 | 0.01 | 2.164 | 18.26 | 3.28 | 6.9 | 92.4 | 0.7 | -6.27 | 0.54 | 0.57 | 1.13 | 3.6 | 0.003 | 0.84 | 0.0 | 0.05 | 16.96 | 0.00 | 2.119 | 16.12 | 3.47 | 11.2 | 88.8 | 0.0 | -3.25 | 1.74 | 0.55 | 0.59 | 0.97 | 9576 | 1166 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5ZWo | 6974 | 2024-03-19 | 2018-05-16 | 3.9 | 4.04 | — | 3.8 | 0.014 | 1.42 | 19.0 | 0.08 | 17.27 | 0.01 | 1.462 | 25.40 | 0.63 | 9.1 | 90.0 | 0.9 | -4.00 | 0.65 | 0.62 | 1.56 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 17.57 | 0.00 | 1.877 | 12.88 | 2.68 | 6.1 | 93.5 | 0.4 | -1.07 | 0.85 | 0.63 | 0.59 | 0.96 | 91261 | 13180 | 61 | 594 | 2 | 0 | 0 | logfile |
✔ | 7D7R | 30610 | 2024-03-11 | 2020-10-05 | 4.0 | 4.04 | — | 4.0 | 0.004 | 0.96 | 0.0 | 0.05 | 14.87 | 0.01 | 2.270 | 5.25 | 0.36 | 3.6 | 96.2 | 0.2 | -3.66 | 0.51 | 0.58 | — | 3.9 | 0.003 | 0.79 | 0.0 | 0.04 | 16.16 | 0.00 | 2.183 | 16.74 | 4.38 | 3.5 | 96.5 | 0.0 | 0.23 | 1.31 | 0.51 | 0.59 | — | 7680 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5W7G | 8780 | 2024-03-10 | 2017-06-19 | 4.5 | 4.20 | — | 4.2 | 0.015 | 1.17 | 0.0 | 0.07 | 16.66 | 0.01 | 2.165 | 7.63 | 0.45 | 1.2 | 98.8 | 0.0 | -0.31 | 0.50 | 0.47 | — | 4.2 | 0.006 | 1.01 | 0.0 | 0.05 | 16.45 | 0.01 | 2.151 | 41.83 | 0.00 | 6.8 | 93.2 | 0.0 | -1.00 | 1.86 | 0.55 | 0.59 | — | 53508 | 5397 | 44 | 504 | 0 | 0 | 0 | logfile |
✔ | 6BGJ | 7096 | 2024-03-11 | 2017-10-28 | 3.8 | 3.68 | 3.27 | 3.6 | 0.008 | 1.21 | 0.0 | 0.06 | 10.72 | 0.01 | 2.142 | 10.55 | 0.00 | 13.7 | 85.7 | 0.6 | -5.82 | 0.47 | 0.59 | 1.68 | 3.6 | 0.003 | 0.83 | 0.0 | 0.04 | 13.97 | 0.00 | 2.116 | 15.93 | 2.07 | 12.9 | 86.9 | 0.2 | -1.17 | 1.38 | 0.49 | 0.59 | 1.24 | 7418 | 980 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6R91 | 4765 | 2024-03-24 | 2019-04-02 | 4.1 | 5.15 | — | 5.0 | 0.006 | 1.01 | 0.0 | 0.05 | 23.87 | 0.01 | 2.021 | 3.55 | 0.65 | 4.6 | 95.0 | 0.5 | -0.83 | 0.64 | 0.52 | — | 5.0 | 0.004 | 0.68 | 0.0 | 0.04 | 23.67 | 0.00 | 1.815 | 14.92 | 0.00 | 7.9 | 92.1 | 0.1 | -1.30 | 0.97 | 0.67 | 0.59 | — | 40540 | 1969 | 12 | 290 | 0 | 0 | 19063 | logfile |
✔ | 7VWZ | 32166 | 2024-03-22 | 2021-11-12 | 4.0 | 2.61 | — | 2.6 | 0.006 | 1.01 | 0.0 | 0.06 | 18.64 | 0.01 | 2.148 | 10.68 | 1.10 | 8.8 | 91.0 | 0.2 | -5.04 | 0.59 | 0.58 | — | 2.6 | 0.003 | 0.69 | 0.0 | 0.04 | 19.96 | 0.00 | 2.040 | 15.67 | 4.16 | 8.4 | 91.6 | 0.0 | -2.66 | 0.76 | 0.59 | 0.59 | — | 34509 | 4045 | 11 | 129 | 3 | 0 | 0 | logfile |