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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7N7P | 24230 | 2022-07-03 | 2021-06-10 | 3.24 | 2.66 | — | 3.2 | 0.058 | 2.03 | 0.0 | 0.04 | 19.97 | 0.00 | 1.647 | 7.96 | 0.35 | 1.6 | 98.4 | 0.0 | 1.62 | 0.58 | 0.84 | 2.19 | 3.0 | 0.003 | 0.57 | 0.0 | 0.03 | 17.79 | 0.00 | 2.123 | 11.32 | 0.00 | 2.0 | 98.0 | 0.0 | 3.61 | 0.36 | 0.59 | 0.85 | 1.72 | 5400 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7RSQ | 24677 | 2022-07-03 | 2021-08-11 | 3.8 | 4.03 | 3.73 | 4.1 | 0.008 | 0.80 | 0.0 | 0.05 | 12.74 | 0.00 | 2.360 | 4.01 | 2.88 | 3.0 | 97.0 | 0.0 | -0.64 | 0.63 | 0.68 | 1.39 | 4.2 | 0.002 | 0.51 | 0.0 | 0.03 | 15.35 | 0.00 | 2.389 | 2.76 | 0.00 | 2.6 | 97.4 | 0.0 | 2.59 | 1.83 | 0.63 | 0.70 | 1.77 | 3970 | 246 | 1 | 0 | 0 | 0 | 1958 | logfile |
✔ | 6TMi | 10522 | 2022-07-03 | 2019-12-04 | 3.5 | 3.96 | 3.49 | 3.8 | 0.006 | 0.64 | 0.0 | 0.04 | 16.16 | 0.01 | 2.113 | 9.16 | 0.58 | 10.0 | 90.0 | 0.0 | -4.41 | 0.53 | 0.77 | 1.38 | 3.8 | 0.004 | 0.66 | 0.0 | 0.03 | 17.49 | 0.01 | 2.076 | 10.10 | 0.58 | 7.1 | 92.9 | 0.0 | 0.42 | 1.43 | 0.53 | 0.80 | 1.79 | 9606 | 605 | 5 | 0 | 0 | 0 | 4842 | logfile |
✔ | 7LJ3 | 23388 | 2022-07-05 | 2021-01-28 | 2.9 | 2.92 | — | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.12 | 0.00 | 1.041 | 27.61 | 3.30 | 3.6 | 96.0 | 0.4 | 0.29 | 0.10 | 0.23 | -0.14 | 2.9 | 0.010 | 0.89 | 0.0 | 0.03 | 19.65 | 0.01 | 1.899 | 9.15 | 4.21 | 5.0 | 94.9 | 0.2 | 2.05 | 1.40 | 0.22 | 0.78 | 1.86 | 25714 | 2564 | 12 | 225 | 0 | 0 | 0 | logfile |
✔ | 7VBM | 31882 | 2022-07-03 | 2021-08-31 | 3.4 | 2.78 | — | 3.1 | 0.005 | 0.75 | 1.0 | 0.04 | 28.60 | 0.01 | 2.221 | 6.15 | 0.18 | 2.0 | 98.0 | 0.0 | 1.47 | 0.68 | 0.78 | 2.79 | 3.1 | 0.003 | 0.55 | 0.0 | 0.03 | 28.92 | 0.00 | 2.190 | 6.74 | 0.00 | 1.8 | 98.2 | 0.0 | 2.72 | 0.29 | 0.68 | 0.80 | 1.94 | 10475 | 677 | 10 | 252 | 0 | 0 | 0 | logfile |
✔ | 7WAY | 32389 | 2022-07-03 | 2021-12-15 | 2.9 | 3.11 | — | 2.9 | 0.004 | 0.54 | 0.0 | 0.04 | 16.63 | 0.00 | 2.172 | 5.73 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.87 | 0.85 | 2.73 | 2.9 | 0.002 | 0.56 | 0.0 | 0.03 | 17.57 | 0.00 | 2.210 | 6.10 | 0.72 | 2.1 | 97.9 | 0.0 | 1.76 | 0.33 | 0.88 | 0.86 | 2.28 | 11453 | 960 | 4 | 175 | 0 | 0 | 0 | logfile |
✔ | 6ZBJ | 11156 | 2022-07-07 | 2020-06-08 | 3.3 | 4.20 | 3.47 | 3.8 | 0.011 | 1.04 | 0.0 | 0.06 | 14.14 | 0.01 | 2.351 | 1.38 | 0.00 | 0.7 | 99.3 | 0.0 | -1.34 | 0.87 | 0.81 | 1.60 | 3.7 | 0.002 | 0.49 | 0.0 | 0.03 | 15.22 | 0.00 | 2.046 | 3.49 | 0.00 | 0.9 | 99.1 | 0.0 | 3.86 | 1.30 | 0.87 | 0.82 | 1.19 | 39212 | 2334 | 4 | 0 | 0 | 0 | 19864 | logfile |
✔ | 6ZBC | 11150 | 2022-07-04 | 2020-06-08 | 3.1 | 3.91 | 3.31 | 3.6 | 0.007 | 1.02 | 0.0 | 0.05 | 13.80 | 0.00 | 2.449 | 1.08 | 0.00 | 1.3 | 98.7 | 0.0 | -0.79 | 0.85 | 0.80 | 2.24 | 3.6 | 0.002 | 0.47 | 0.0 | 0.03 | 15.19 | 0.00 | 2.079 | 3.69 | 0.09 | 1.1 | 98.9 | 0.0 | 4.36 | 0.84 | 0.85 | 0.81 | 1.55 | 19534 | 1160 | 4 | 0 | 0 | 0 | 9902 | logfile |
✔ | 7BL6 | 12219 | 2022-07-06 | 2021-01-18 | 4.0 | 7.11 | — | 4.0 | 0.002 | 0.42 | 0.0 | 0.03 | 13.17 | 0.00 | 2.117 | 11.03 | 0.07 | 4.7 | 95.3 | 0.1 | -0.28 | 0.92 | 0.83 | — | 4.0 | 0.004 | 0.66 | 0.0 | 0.03 | 16.96 | 0.00 | 1.946 | 35.11 | 0.17 | 8.2 | 91.8 | 0.1 | -1.70 | 3.13 | 0.95 | 0.82 | — | 92769 | 3600 | 42 | 3016 | 5 | 27 | 0 | logfile |
✔ | 7RZU | 24778 | 2022-07-02 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.005 | 0.52 | 0.0 | 0.03 | 15.91 | 0.00 | 2.234 | 8.11 | 1.75 | 0.0 | 100.0 | 0.0 | 4.99 | 0.49 | 0.80 | 0.81 | 1.62 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WKT | 21708 | 2022-07-02 | 2020-04-16 | 3.4 | 3.21 | 3.09 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 13.97 | 0.01 | 2.329 | 0.65 | 0.00 | 1.9 | 98.1 | 0.0 | -3.42 | 0.65 | 0.75 | 3.69 | 3.3 | 0.003 | 0.59 | 0.0 | 0.03 | 15.90 | 0.00 | 2.202 | 11.45 | 0.00 | 4.8 | 95.2 | 0.0 | 3.63 | 1.34 | 0.65 | 0.75 | 3.76 | 3152 | 424 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2022-07-02 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.30 | 0.0 | 0.03 | 15.08 | 0.00 | 2.337 | 5.30 | 0.36 | 0.0 | 100.0 | 0.0 | 5.90 | 0.30 | 0.81 | 0.82 | 1.87 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q2Z | 13786 | 2022-07-03 | 2021-10-26 | 3.2 | 2.91 | 3.15 | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 18.78 | 0.00 | 2.227 | 4.26 | 0.00 | 6.5 | 93.4 | 0.1 | -1.44 | 0.67 | 0.80 | 2.05 | 3.2 | 0.002 | 0.53 | 0.0 | 0.03 | 19.97 | 0.00 | 2.116 | 3.52 | 0.00 | 2.1 | 97.7 | 0.1 | 2.12 | 1.23 | 0.71 | 0.85 | 1.71 | 8258 | 902 | 4 | 46 | 0 | 0 | 0 | logfile |
✔ | 7V99 | 31811 | 2022-07-04 | 2021-08-24 | 3.54 | 4.33 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 14.51 | 0.00 | 2.258 | 7.89 | 0.10 | 5.9 | 94.1 | 0.1 | -3.21 | 0.79 | 0.68 | 0.93 | 3.3 | 0.002 | 0.60 | 0.0 | 0.03 | 15.74 | 0.00 | 2.204 | 11.58 | 0.40 | 5.9 | 94.1 | 0.1 | -0.13 | 1.37 | 0.82 | 0.75 | 0.69 | 14582 | 1170 | 5 | 249 | 0 | 0 | 0 | logfile |
✔ | 7LV8 | 23529 | 2022-07-03 | 2021-02-24 | 3.4 | 3.85 | 3.57 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 27.28 | 0.00 | 1.334 | 3.06 | 0.17 | 2.7 | 97.3 | 0.0 | -3.26 | 0.70 | 0.78 | 0.97 | 3.9 | 0.003 | 0.58 | 0.0 | 0.03 | 27.73 | 0.00 | 2.150 | 9.74 | 0.33 | 1.9 | 98.1 | 0.0 | 2.31 | 0.58 | 0.70 | 0.79 | 1.13 | 10651 | 764 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7TRE | 26087 | 2022-07-03 | 2022-01-28 | 3.5 | 3.56 | — | 3.5 | 0.006 | 0.77 | 0.0 | 0.05 | 16.75 | 0.01 | 2.188 | 7.57 | 0.11 | 6.4 | 93.6 | 0.0 | -0.75 | 0.77 | 0.77 | 2.23 | 3.5 | 0.006 | 0.82 | 0.0 | 0.03 | 17.07 | 0.00 | 2.172 | 7.45 | 0.32 | 4.1 | 95.9 | 0.0 | 0.75 | 0.71 | 0.78 | 0.82 | 2.20 | 13411 | 1086 | 4 | 224 | 0 | 0 | 0 | logfile |
✔ | 6YE4 | 10789 | 2022-07-03 | 2020-03-24 | 3.2 | 3.33 | 3.07 | 3.3 | 0.026 | 1.69 | 0.0 | 0.10 | 14.61 | 0.01 | 2.373 | 3.02 | 0.00 | 0.9 | 99.1 | 0.0 | -3.36 | 0.73 | 0.88 | 2.50 | 3.3 | 0.003 | 0.52 | 0.0 | 0.03 | 16.50 | 0.00 | 2.347 | 5.29 | 0.22 | 2.4 | 97.6 | 0.0 | 3.50 | 0.93 | 0.67 | 0.87 | 1.40 | 9140 | 1180 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7TAN | 25777 | 2022-07-03 | 2021-12-21 | 3.0 | 2.95 | — | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 27.32 | 0.00 | 2.287 | 3.25 | 0.00 | 2.8 | 97.2 | 0.0 | 2.18 | 0.82 | 0.85 | 2.22 | 3.1 | 0.004 | 0.52 | 0.0 | 0.03 | 27.86 | 0.00 | 2.211 | 2.79 | 0.47 | 1.9 | 98.1 | 0.0 | 2.21 | 0.33 | 0.84 | 0.87 | 1.98 | 12119 | 768 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7D80 | 30611 | 2022-07-10 | 2020-10-06 | 4.1 | 6.37 | — | 2.8 | 0.011 | 1.03 | 0.0 | 0.05 | 16.93 | 0.01 | 1.560 | 8.57 | 0.88 | 12.7 | 86.9 | 0.3 | -5.50 | 0.81 | 0.63 | — | 2.8 | 0.005 | 0.66 | 0.0 | 0.03 | 16.41 | 0.01 | 1.960 | 32.50 | 0.00 | 10.8 | 89.0 | 0.2 | -2.88 | 0.81 | 0.94 | 0.88 | — | 150808 | 6218 | 57 | 4761 | 0 | 0 | 0 | logfile |
✔ | 7D4Q | 30576 | 2022-07-05 | 2020-09-24 | 2.74 | 2.99 | 2.80 | 3.0 | 0.009 | 0.78 | 0.0 | 0.04 | 12.13 | 0.00 | 2.254 | 6.42 | 0.67 | 1.4 | 98.6 | 0.0 | 2.70 | 0.47 | 0.71 | 3.84 | 3.0 | 0.003 | 0.48 | 0.0 | 0.03 | 15.53 | 0.00 | 2.196 | 6.27 | 1.13 | 1.4 | 98.6 | 0.0 | 2.53 | 0.44 | 0.69 | 0.87 | 3.86 | 22388 | 2672 | 8 | 0 | 24 | 0 | 0 | logfile |