The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8BPA | 16147 | 2023-07-05 | 2022-11-16 | 3.7 | 2.50 | 3.80 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 18.50 | 0.01 | 2.127 | 18.60 | 0.97 | 4.0 | 96.0 | 0.0 | 0.00 | 0.69 | 0.65 | 0.97 | 1.6 | 0.003 | 0.80 | 0.0 | 0.04 | 18.78 | 0.01 | 2.140 | 16.42 | 0.53 | 4.4 | 95.6 | 0.0 | 0.14 | 1.61 | 0.69 | 0.66 | 1.15 | 10393 | 1280 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7TU5 | 26126 | 2023-07-17 | 2022-02-02 | 2.1 | 1.97 | 2.06 | 1.8 | 0.009 | 0.85 | 6.0 | 0.06 | 15.88 | 0.01 | 1.910 | 4.33 | 1.54 | 1.4 | 98.6 | 0.0 | 0.64 | 0.84 | 0.82 | 4.27 | 1.7 | 0.006 | 0.58 | 0.0 | 0.04 | 16.46 | 0.00 | 1.927 | 5.68 | 2.06 | 1.7 | 98.3 | 0.0 | 1.28 | 0.78 | 0.87 | 0.87 | 5.20 | 19656 | 2574 | 18 | 0 | 6 | 6 | 0 | logfile |
✔ | 7UWL | 26835 | 2023-07-05 | 2022-05-03 | 3.7 | 2.40 | 3.59 | 1.9 | 0.005 | 0.78 | 1.0 | 0.05 | 16.04 | 0.00 | 2.137 | 15.51 | 0.63 | 7.1 | 92.9 | 0.0 | -1.39 | 0.68 | 0.64 | 1.65 | 1.7 | 0.004 | 0.80 | 0.0 | 0.05 | 16.76 | 0.01 | 2.078 | 15.76 | 0.63 | 8.1 | 91.9 | 0.0 | -1.62 | 0.45 | 0.69 | 0.66 | 1.57 | 10100 | 1236 | 16 | 0 | 22 | 0 | 0 | logfile |
✔ | 7Z1Z | 14453 | 2023-07-16 | 2022-02-25 | 3.5 | 2.62 | 3.61 | 1.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.15 | 0.00 | 2.224 | 7.50 | 0.00 | 2.4 | 97.6 | 0.0 | 0.26 | 0.64 | 0.65 | 1.09 | 1.7 | 0.004 | 0.76 | 0.0 | 0.05 | 18.28 | 0.00 | 2.047 | 13.95 | 0.40 | 3.7 | 96.3 | 0.0 | -0.02 | 0.74 | 0.68 | 0.68 | 1.46 | 35605 | 4031 | 36 | 140 | 12 | 0 | 0 | logfile |
✔ | 7S3H | 24823 | 2023-07-05 | 2021-09-06 | 2.5 | 2.10 | 2.54 | 1.7 | 0.009 | 1.08 | 0.0 | 0.05 | 16.86 | 0.01 | 2.234 | 3.77 | 0.11 | 3.7 | 96.3 | 0.0 | -1.50 | 0.75 | 0.71 | 1.79 | 1.7 | 0.003 | 0.64 | 0.0 | 0.04 | 18.76 | 0.00 | 2.130 | 12.44 | 1.96 | 2.8 | 97.2 | 0.0 | -0.10 | 0.74 | 0.78 | 0.76 | 1.99 | 9966 | 1030 | 4 | 75 | 1 | 0 | 0 | logfile |
✔ | 7oUG | 13076 | 2023-07-07 | 2021-06-11 | 3.1 | 2.33 | 3.12 | 1.7 | 0.004 | 0.74 | 0.0 | 0.04 | 17.59 | 0.01 | 1.769 | 5.66 | 0.14 | 2.4 | 97.6 | 0.0 | 0.28 | 0.78 | 0.75 | 2.41 | 1.7 | 0.003 | 0.66 | 0.0 | 0.04 | 19.44 | 0.00 | 1.919 | 9.45 | 0.48 | 2.1 | 97.9 | 0.0 | 0.04 | 0.63 | 0.78 | 0.79 | 2.36 | 15090 | 1664 | 16 | 80 | 10 | 8 | 0 | logfile |
✔ | 7U9X | 26409 | 2023-07-14 | 2022-03-11 | 2.58 | 2.84 | — | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 14.15 | 0.00 | 2.080 | 9.25 | 0.11 | 2.3 | 97.7 | 0.0 | 1.30 | 0.87 | 0.83 | 3.55 | 1.7 | 0.003 | 0.64 | 0.0 | 0.04 | 15.20 | 0.00 | 2.114 | 8.19 | 0.25 | 2.9 | 97.1 | 0.0 | 1.66 | 0.41 | 0.88 | 0.87 | 3.93 | 138588 | 17324 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 8D37 | 27155 | 2023-07-07 | 2022-05-31 | 2.65 | 2.08 | 2.72 | 1.8 | 0.003 | 0.52 | 0.0 | 0.04 | 12.52 | 0.00 | 1.962 | 4.63 | 0.32 | 3.7 | 96.3 | 0.0 | 0.95 | 0.66 | 0.73 | 1.85 | 1.7 | 0.003 | 0.70 | 0.0 | 0.04 | 18.24 | 0.00 | 2.139 | 11.10 | 3.36 | 3.1 | 96.9 | 0.0 | 0.70 | 1.11 | 0.67 | 0.74 | 1.64 | 15314 | 1784 | 6 | 48 | 2 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2023-07-03 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.57 | 0.0 | 0.04 | 17.55 | 0.00 | 2.307 | 7.74 | 1.59 | 1.6 | 98.4 | 0.0 | 2.51 | 0.79 | 0.36 | 0.78 | 3.13 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8CPV | 16787 | 2023-07-16 | 2023-03-03 | 1.76 | 1.73 | 1.80 | 1.7 | 0.006 | 0.91 | 0.0 | 0.07 | 14.41 | 0.01 | 2.182 | 2.58 | 0.00 | 1.0 | 99.0 | 0.0 | 2.15 | 0.78 | 0.84 | 8.93 | 1.7 | 0.002 | 0.49 | 0.0 | 0.03 | 14.99 | 0.00 | 2.274 | 3.00 | 0.00 | 1.8 | 98.2 | 0.0 | 4.87 | 1.19 | 0.81 | 0.87 | 8.51 | 35855 | 4152 | 72 | 0 | 38 | 1737 | 0 | logfile |
✔ | 7UA4 | 26414 | 2023-07-24 | 2022-03-11 | 2.93 | 3.30 | — | 1.7 | 0.003 | 0.71 | 0.0 | 0.04 | 14.43 | 0.01 | 1.425 | 10.26 | 1.34 | 3.6 | 96.3 | 0.1 | 1.05 | 0.87 | 0.82 | 3.16 | 1.7 | 0.003 | 0.67 | 1.0 | 0.04 | 15.15 | 0.00 | 2.076 | 9.43 | 0.41 | 3.7 | 96.2 | 0.1 | 1.21 | 1.23 | 0.88 | 0.85 | 3.21 | 147856 | 18472 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 7L1Q | 23115 | 2023-07-11 | 2020-12-15 | 3.4 | 2.29 | — | 2.0 | 0.008 | 1.29 | 6.0 | 0.07 | 14.92 | 0.01 | 1.807 | 2.68 | 2.54 | 3.7 | 96.1 | 0.2 | -0.80 | 0.72 | 0.67 | 1.56 | 1.7 | 0.003 | 0.80 | 0.0 | 0.05 | 17.82 | 0.01 | 1.889 | 15.87 | 0.82 | 3.4 | 96.5 | 0.0 | -0.23 | 1.90 | 0.73 | 0.73 | 1.36 | 24204 | 3118 | 13 | 0 | 13 | 0 | 0 | logfile |
✔ | 8CPS | 16784 | 2023-07-16 | 2023-03-03 | 1.82 | 1.69 | 1.90 | 1.7 | 0.003 | 0.66 | 0.0 | 0.05 | 15.42 | 0.01 | 2.116 | 2.82 | 0.00 | 1.0 | 99.0 | 0.0 | 2.28 | 0.75 | 0.81 | 8.54 | 1.7 | 0.003 | 0.58 | 0.0 | 0.04 | 17.00 | 0.00 | 2.154 | 4.46 | 0.16 | 1.2 | 98.8 | 0.0 | 4.78 | 0.30 | 0.77 | 0.83 | 8.39 | 36034 | 4152 | 72 | 0 | 38 | 1916 | 0 | logfile |
✔ | 7Z0o | 14428 | 2023-07-06 | 2022-02-23 | 2.8 | 1.99 | 2.70 | 1.8 | 0.004 | 0.66 | 0.0 | 0.04 | 19.63 | 0.00 | 2.189 | 6.20 | 1.42 | 1.7 | 98.3 | 0.0 | 1.08 | 0.68 | 0.73 | 3.27 | 1.7 | 0.004 | 0.60 | 0.0 | 0.04 | 21.27 | 0.00 | 2.148 | 9.25 | 3.29 | 2.0 | 98.0 | 0.0 | 1.65 | 0.48 | 0.77 | 0.79 | 3.26 | 11864 | 1256 | 10 | 78 | 0 | 0 | 0 | logfile |
✔ | 8CPX | 16789 | 2023-07-16 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.212 | 2.81 | 1.31 | 1.8 | 98.2 | 0.0 | 4.58 | 0.39 | 0.78 | 0.85 | 7.90 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✔ | 7MW6 | 24064 | 2023-07-16 | 2021-05-15 | 3.22 | 2.55 | — | 1.7 | 0.005 | 0.84 | 1.0 | 0.09 | 12.90 | 0.01 | 1.556 | 11.05 | 0.13 | 5.1 | 94.2 | 0.7 | -1.15 | 0.80 | 0.77 | 2.91 | 1.7 | 0.004 | 0.74 | 0.0 | 0.05 | 14.42 | 0.01 | 2.123 | 11.72 | 0.19 | 5.9 | 93.5 | 0.6 | -0.57 | 0.44 | 0.80 | 0.75 | 2.80 | 35247 | 4446 | 45 | 0 | 87 | 0 | 0 | logfile |
✔ | 7XA3 | 33086 | 2023-07-05 | 2022-03-17 | 2.9 | 2.18 | — | 2.1 | 0.005 | 0.85 | 0.0 | 0.05 | 7.87 | 0.01 | 2.250 | 4.13 | 0.00 | 2.5 | 97.5 | 0.0 | 0.60 | 0.75 | 0.74 | 3.21 | 1.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.17 | 0.00 | 2.192 | 9.41 | 2.38 | 3.4 | 96.6 | 0.0 | 1.61 | 1.17 | 0.78 | 0.78 | 2.75 | 9591 | 1220 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N8o | 24239 | 2023-07-04 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.025 | 2.40 | 0.0 | 0.11 | 20.28 | 0.01 | 1.522 | 14.77 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.81 | 0.0 | 0.05 | 18.74 | 0.01 | 2.000 | 12.74 | 1.66 | 3.0 | 97.0 | 0.0 | 0.83 | 0.34 | 0.77 | 0.80 | 5.41 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7T9i | 25758 | 2023-07-11 | 2021-12-19 | 2.9 | 2.43 | — | 1.9 | 0.005 | 0.91 | 1.0 | 0.05 | 12.76 | 0.01 | 2.016 | 3.30 | 0.62 | 3.6 | 96.4 | 0.0 | -0.16 | 0.69 | 0.63 | 2.32 | 1.8 | 0.004 | 0.67 | 0.0 | 0.04 | 15.11 | 0.00 | 1.904 | 9.43 | 2.50 | 6.3 | 93.7 | 0.0 | -0.52 | 1.14 | 0.74 | 0.72 | 2.51 | 23529 | 1532 | 11 | 0 | 8 | 0 | 11557 | logfile |
✔ | 7M3G | 23654 | 2023-07-06 | 2021-03-18 | 2.5 | 2.29 | — | 1.8 | 0.007 | 0.96 | 0.0 | 0.06 | 17.07 | 0.01 | 2.281 | 2.21 | 0.93 | 3.0 | 97.0 | 0.0 | -2.02 | 0.84 | 0.85 | 3.70 | 1.8 | 0.004 | 0.61 | 0.0 | 0.04 | 17.55 | 0.00 | 2.167 | 4.31 | 2.22 | 3.7 | 96.3 | 0.0 | -0.24 | 0.33 | 0.85 | 0.87 | 3.45 | 13298 | 1627 | 11 | 0 | 41 | 0 | 0 | logfile |