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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WP9 | 32679 | 2022-05-15 | 2022-01-23 | 2.56 | 2.20 | — | 1.9 | 0.003 | 0.76 | 1.0 | 0.05 | 14.22 | 0.01 | 2.294 | 4.09 | 0.40 | 4.9 | 95.0 | 0.1 | -4.01 | 0.71 | 0.72 | 2.33 | 2.0 | 0.005 | 0.64 | 0.0 | 0.05 | 16.42 | 0.00 | 2.068 | 8.99 | 2.25 | 5.0 | 95.0 | 0.0 | -1.52 | 1.00 | 0.75 | 0.79 | 2.39 | 25077 | 3141 | 13 | 0 | 28 | 0 | 0 | logfile |
✔ | 7S8M | 24897 | 2022-05-12 | 2021-09-18 | 2.54 | 2.13 | 2.54 | 2.0 | 0.004 | 0.59 | 0.0 | 0.04 | 12.64 | 0.00 | 2.171 | 6.94 | 0.00 | 4.1 | 95.9 | 0.0 | 0.46 | 0.79 | 0.80 | 4.13 | 2.0 | 0.003 | 0.56 | 0.0 | 0.04 | 15.00 | 0.00 | 2.213 | 6.94 | 1.95 | 4.2 | 95.8 | 0.0 | 1.25 | 0.33 | 0.81 | 0.82 | 3.88 | 8346 | 1102 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MW5 | 24063 | 2022-05-16 | 2021-05-15 | 3.42 | 3.24 | — | 2.0 | 0.003 | 0.69 | 0.0 | 0.05 | 15.22 | 0.01 | 2.140 | 14.32 | 0.11 | 8.0 | 91.5 | 0.6 | -1.83 | 0.84 | 0.79 | 2.29 | 2.0 | 0.007 | 0.76 | 1.0 | 0.05 | 16.40 | 0.01 | 2.094 | 17.24 | 0.22 | 10.0 | 89.6 | 0.4 | -1.65 | 1.14 | 0.84 | 0.81 | 2.04 | 33635 | 4242 | 41 | 0 | 83 | 0 | 0 | logfile |
✔ | 7QE7 | 13931 | 2022-05-15 | 2021-12-01 | 2.9 | 2.22 | 2.97 | 2.0 | 0.005 | 0.64 | 1.0 | 0.04 | 13.72 | 0.00 | 2.201 | 10.30 | 0.12 | 4.1 | 95.9 | 0.0 | -2.47 | 0.78 | 0.80 | 2.70 | 2.0 | 0.003 | 0.71 | 1.0 | 0.04 | 17.27 | 0.00 | 2.065 | 11.67 | 1.73 | 3.2 | 96.8 | 0.0 | 0.90 | 1.18 | 0.77 | 0.80 | 2.24 | 71432 | 8928 | 24 | 0 | 6 | 0 | 0 | logfile |
✔ | 5FTK | 3296 | 2022-05-16 | 2016-01-14 | 2.4 | 2.04 | — | 2.0 | 0.011 | 1.39 | 0.0 | 0.07 | 12.31 | 0.01 | 2.216 | 25.10 | 0.65 | 6.1 | 93.5 | 0.4 | -4.37 | 0.44 | 0.66 | 3.22 | 2.0 | 0.008 | 1.12 | 1.0 | 0.05 | 18.03 | 0.01 | 2.074 | 19.63 | 4.07 | 8.9 | 91.0 | 0.1 | -2.22 | 1.09 | 0.49 | 0.68 | 1.94 | 34374 | 4338 | 18 | 0 | 12 | 96 | 0 | logfile |
✔ | 5FTJ | 3295 | 2022-05-16 | 2016-01-14 | 2.3 | 2.04 | — | 2.0 | 0.010 | 1.30 | 0.0 | 0.07 | 14.89 | 0.01 | 1.862 | 40.83 | 0.81 | 5.7 | 93.3 | 1.0 | -3.32 | 0.42 | 0.65 | 2.67 | 2.0 | 0.004 | 0.84 | 0.0 | 0.05 | 18.68 | 0.01 | 2.113 | 14.60 | 2.17 | 6.1 | 93.7 | 0.1 | -0.87 | 1.23 | 0.46 | 0.66 | 1.57 | 34602 | 4338 | 18 | 0 | 18 | 120 | 0 | logfile |
✔ | 7EZM | 31389 | 2022-05-13 | 2021-06-01 | 2.9 | 2.20 | — | 2.0 | 0.011 | 1.07 | 1.0 | 0.15 | 13.21 | 0.01 | 2.228 | 5.06 | 0.94 | 3.8 | 96.2 | 0.0 | -0.87 | 0.76 | 0.76 | 3.60 | 2.0 | 0.004 | 0.78 | 0.0 | 0.07 | 16.17 | 0.00 | 2.095 | 11.52 | 2.51 | 2.1 | 97.9 | 0.0 | 0.54 | 0.63 | 0.78 | 0.80 | 2.94 | 9008 | 1171 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LVQ | 23540 | 2022-05-13 | 2021-02-26 | 2.9 | 2.12 | 2.86 | 2.0 | 0.024 | 1.33 | 1.0 | 0.09 | 14.76 | 0.01 | 1.920 | 5.41 | 0.66 | 6.4 | 93.5 | 0.1 | -3.20 | 0.55 | 0.77 | 4.09 | 2.0 | 0.003 | 0.65 | 0.0 | 0.04 | 17.22 | 0.00 | 2.029 | 8.32 | 1.42 | 3.0 | 97.0 | 0.0 | 0.02 | 1.04 | 0.57 | 0.82 | 3.35 | 9767 | 1226 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 7S8L | 24896 | 2022-05-12 | 2021-09-18 | 2.45 | 2.08 | 2.46 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 12.22 | 0.00 | 2.238 | 2.57 | 0.00 | 3.5 | 96.5 | 0.0 | 1.27 | 0.81 | 0.80 | 4.28 | 2.0 | 0.003 | 0.62 | 0.0 | 0.04 | 15.55 | 0.01 | 2.252 | 3.26 | 1.34 | 3.5 | 96.5 | 0.0 | 1.25 | 0.35 | 0.85 | 0.84 | 3.95 | 8177 | 1096 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YL3 | 10835 | 2022-05-22 | 2020-04-06 | 1.98 | 2.04 | 1.99 | 2.0 | 0.067 | 3.60 | 246.0 | 0.36 | 16.35 | 0.02 | 1.877 | 4.58 | 2.74 | 5.3 | 94.4 | 0.4 | -2.46 | 0.78 | 0.83 | 6.40 | 2.0 | 0.005 | 0.78 | 0.0 | 0.05 | 16.28 | 0.01 | 1.724 | 5.71 | 1.55 | 4.1 | 95.8 | 0.1 | -0.22 | 0.53 | 0.81 | 0.86 | 7.04 | 150156 | 9552 | 84 | 0 | 24 | 3672 | 73044 | logfile |
✔ | 7LJC | 23390 | 2022-05-12 | 2021-01-28 | 3.0 | 2.23 | — | 2.1 | 0.005 | 1.00 | 0.0 | 0.07 | 8.58 | 0.01 | 2.282 | 5.42 | 0.11 | 2.8 | 97.2 | 0.0 | -1.06 | 0.78 | 0.81 | 3.11 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 14.85 | 0.00 | 2.147 | 11.14 | 1.45 | 2.5 | 97.5 | 0.0 | 0.50 | 1.23 | 0.76 | 0.78 | 3.06 | 8544 | 1040 | 6 | 0 | 14 | 0 | 0 | logfile |
✔ | 7Q2X | 13783 | 2022-05-14 | 2021-10-26 | 3.0 | 2.22 | — | 2.1 | 0.002 | 0.55 | 0.0 | 0.04 | 17.41 | 0.00 | 2.035 | 7.71 | 0.11 | 2.6 | 97.4 | 0.0 | 2.57 | 0.74 | 0.70 | 1.84 | 2.0 | 0.005 | 0.72 | 0.0 | 0.04 | 20.34 | 0.00 | 1.862 | 10.75 | 2.42 | 3.4 | 96.6 | 0.0 | 1.82 | 1.68 | 0.78 | 0.79 | 2.18 | 18240 | 2098 | 8 | 72 | 6 | 0 | 0 | logfile |
✔ | 6WWR | 21945 | 2022-05-13 | 2020-05-09 | 2.7 | 2.08 | 2.69 | 1.9 | 0.009 | 0.96 | 1.0 | 0.06 | 14.63 | 0.01 | 1.967 | 5.49 | 0.57 | 5.8 | 94.2 | 0.0 | -3.62 | 0.60 | 0.77 | 5.00 | 2.0 | 0.004 | 0.67 | 0.0 | 0.04 | 16.99 | 0.00 | 1.916 | 6.86 | 1.72 | 3.9 | 96.1 | 0.0 | -0.28 | 1.08 | 0.62 | 0.84 | 3.85 | 9719 | 1220 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7B18 | 11981 | 2022-05-16 | 2020-11-24 | 2.62 | 2.27 | 2.75 | 2.1 | 0.007 | 0.84 | 0.0 | 0.06 | 12.74 | 0.01 | 2.028 | 13.06 | 0.40 | 4.1 | 95.8 | 0.1 | -0.36 | 0.72 | 0.71 | 3.05 | 2.0 | 0.008 | 0.87 | 1.0 | 0.05 | 15.77 | 0.00 | 2.086 | 13.90 | 2.32 | 4.6 | 95.4 | 0.0 | -0.29 | 0.45 | 0.74 | 0.74 | 2.62 | 30105 | 3814 | 13 | 0 | 44 | 0 | 0 | logfile |
✔ | 6YBQ | 10771 | 2022-05-16 | 2020-03-17 | 1.96 | 2.06 | — | 2.0 | 0.039 | 1.58 | 0.0 | 0.05 | 15.05 | 0.01 | 1.550 | 4.72 | 0.00 | 2.7 | 97.3 | 0.0 | -1.94 | 0.82 | 0.87 | 6.46 | 2.0 | 0.003 | 0.72 | 0.0 | 0.05 | 15.91 | 0.00 | 2.108 | 4.76 | 0.41 | 2.4 | 97.6 | 0.0 | 0.00 | 0.46 | 0.84 | 0.89 | 6.08 | 34092 | 4289 | 36 | 0 | 12 | 871 | 0 | logfile |
✔ | 6WWo | 21942 | 2022-05-13 | 2020-05-09 | 2.8 | 2.07 | 2.79 | 1.9 | 0.011 | 1.28 | 3.0 | 0.06 | 15.86 | 0.02 | 1.958 | 6.13 | 1.99 | 6.1 | 93.5 | 0.3 | -4.55 | 0.58 | 0.74 | 4.64 | 2.0 | 0.004 | 0.69 | 0.0 | 0.04 | 17.72 | 0.00 | 1.941 | 8.00 | 2.75 | 3.7 | 96.2 | 0.1 | -0.57 | 2.43 | 0.60 | 0.81 | 3.89 | 9784 | 1230 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 7VDA | 31912 | 2022-05-15 | 2021-09-06 | 2.26 | 2.04 | 2.42 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 17.67 | 0.00 | 2.142 | 8.23 | 2.20 | 2.6 | 97.4 | 0.0 | 1.67 | 0.66 | 0.82 | 4.06 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 18.09 | 0.00 | 2.073 | 9.24 | 3.21 | 2.5 | 97.5 | 0.0 | 0.92 | 0.42 | 0.66 | 0.83 | 4.25 | 23292 | 2976 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JSX | 22462 | 2022-05-17 | 2020-08-16 | 2.06 | 2.05 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 11.97 | 0.01 | 2.201 | 6.88 | 1.26 | 3.9 | 96.1 | 0.0 | -1.03 | 0.74 | 0.76 | 5.10 | 2.0 | 0.012 | 1.10 | 0.0 | 0.04 | 14.60 | 0.00 | 2.135 | 9.41 | 0.80 | 2.4 | 97.6 | 0.0 | 1.01 | 0.64 | 0.82 | 0.89 | 6.51 | 38813 | 4832 | 40 | 0 | 0 | 1141 | 0 | logfile |
✔ | 7NJN | 12392 | 2022-05-15 | 2021-02-17 | 2.64 | 2.61 | — | 2.0 | 0.004 | 0.51 | 0.0 | 0.04 | 14.52 | 0.00 | 1.931 | 6.50 | 0.00 | 2.3 | 97.6 | 0.1 | 1.48 | 0.85 | 0.87 | 3.94 | 2.0 | 0.005 | 0.54 | 0.0 | 0.04 | 15.84 | 0.00 | 1.682 | 6.81 | 0.55 | 2.5 | 97.4 | 0.1 | 1.46 | 0.89 | 0.86 | 0.89 | 3.84 | 74548 | 4927 | 31 | 0 | 11 | 16 | 37299 | logfile |
✔ | 6WWS | 21946 | 2022-05-13 | 2020-05-09 | 2.7 | 2.11 | 2.68 | 2.0 | 0.010 | 1.28 | 8.0 | 0.07 | 15.94 | 0.02 | 2.077 | 8.13 | 3.06 | 6.5 | 93.1 | 0.3 | -3.99 | 0.59 | 0.78 | 4.41 | 2.0 | 0.005 | 0.64 | 0.0 | 0.04 | 17.50 | 0.00 | 1.943 | 6.29 | 2.01 | 4.0 | 96.0 | 0.0 | -0.68 | 1.05 | 0.61 | 0.84 | 4.31 | 9696 | 1216 | 6 | 1 | 4 | 0 | 0 | logfile |