The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oLL | 20116 | 2022-12-14 | 2019-04-16 | 4.1 | 4.59 | — | 4.4 | 0.004 | 1.05 | 0.0 | 0.06 | 6.94 | 0.01 | 2.400 | 0.40 | 0.00 | 2.0 | 97.8 | 0.2 | -0.51 | 0.67 | 0.58 | — | 4.4 | 0.004 | 0.78 | 0.0 | 0.04 | 5.43 | 0.00 | 2.174 | 5.73 | 0.00 | 13.1 | 86.9 | 0.0 | -2.32 | 2.07 | 0.74 | 0.68 | — | 10426 | 2114 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oLM | 20117 | 2022-12-14 | 2019-04-16 | 4.4 | 5.29 | — | 4.3 | 0.012 | 1.28 | 0.0 | 0.06 | 6.94 | 0.01 | 2.397 | 0.92 | 0.00 | 2.0 | 98.0 | 0.0 | -0.33 | 0.89 | 0.79 | — | 4.3 | 0.003 | 0.66 | 0.0 | 0.04 | 5.44 | 0.00 | 2.217 | 8.78 | 0.00 | 6.2 | 93.8 | 0.0 | -0.92 | 1.58 | 0.91 | 0.83 | — | 10602 | 2112 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7TKP | 25977 | 2022-12-14 | 2022-01-17 | 4.6 | 7.57 | 4.97 | 4.4 | 0.019 | 2.20 | 0.0 | 0.00 | 6.68 | 0.01 | 2.352 | 0.12 | 0.00 | 4.2 | 94.5 | 1.3 | -0.50 | 0.60 | 0.63 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.00 | 5.46 | 0.00 | 2.080 | 13.25 | 0.00 | 10.0 | 89.8 | 0.2 | 0.34 | 0.82 | 0.82 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JG8 | 22314 | 2022-12-14 | 2020-07-18 | 3.3 | 2.35 | 3.38 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 7.20 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.003 | 0.83 | 0.0 | 0.08 | 5.47 | 0.00 | 2.289 | 1.81 | 0.00 | 7.8 | 92.1 | 0.1 | -1.42 | 1.28 | 0.72 | 0.70 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2022-12-16 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 67.37 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.50 | 0.00 | 2.103 | 29.65 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7BZY | 30263 | 2022-12-11 | 2020-04-29 | 3.7 | 5.07 | 3.67 | 2.9 | 0.005 | 1.03 | 0.0 | 0.05 | 7.60 | 0.00 | 2.175 | 11.89 | 0.00 | 15.0 | 84.6 | 0.3 | -5.26 | 0.62 | 0.47 | — | 3.4 | 0.003 | 0.80 | 0.0 | 0.05 | 5.52 | 0.00 | 2.116 | 12.77 | 0.00 | 14.4 | 85.6 | 0.0 | -2.69 | 1.26 | 0.85 | 0.74 | — | 6169 | 1260 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJY | 25946 | 2022-12-14 | 2022-01-17 | 3.8 | 4.84 | 3.78 | 3.6 | 0.020 | 2.29 | 0.0 | 0.00 | 6.75 | 0.01 | 2.333 | 0.12 | 0.00 | 4.3 | 94.3 | 1.5 | -0.54 | 0.59 | 0.68 | — | 3.7 | 0.006 | 0.89 | 0.0 | 0.00 | 5.53 | 0.00 | 2.131 | 6.70 | 0.00 | 11.9 | 87.8 | 0.3 | -0.26 | 1.48 | 0.84 | 0.80 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJZ | 25947 | 2022-12-14 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.3 | 0.012 | 0.93 | 0.0 | 0.00 | 5.55 | 0.00 | 2.081 | 10.56 | 0.00 | 10.4 | 89.3 | 0.3 | 0.17 | 0.73 | 0.79 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WKK | 32566 | 2022-12-16 | 2022-01-10 | 4.2 | 4.30 | — | 3.9 | 0.006 | 0.63 | 0.0 | 0.04 | 4.94 | 0.00 | 2.138 | 2.83 | 0.00 | 4.7 | 95.2 | 0.1 | -2.36 | 0.46 | 0.60 | — | 3.8 | 0.005 | 0.77 | 0.0 | 0.04 | 5.57 | 0.00 | 2.116 | 4.48 | 0.00 | 9.6 | 90.3 | 0.0 | -0.89 | 0.63 | 0.52 | 0.68 | — | 92821 | 18728 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VLZ | 8709 | 2022-12-17 | 2017-04-26 | 4.4 | 4.55 | — | 4.4 | 0.006 | 0.89 | 0.0 | 0.00 | 5.88 | 0.00 | 2.272 | 2.04 | 0.00 | 6.1 | 93.9 | 0.0 | -1.92 | 0.80 | 0.66 | — | 4.4 | 0.003 | 0.81 | 0.0 | 0.00 | 5.63 | 0.00 | 2.281 | 1.18 | 0.00 | 6.0 | 94.0 | 0.0 | -1.57 | 1.65 | 0.83 | 0.78 | — | 96897 | 24179 | 181 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z8K | 14555 | 2022-12-13 | 2022-03-17 | 4.37 | 3.98 | 4.34 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 4.76 | 0.00 | 2.256 | 0.67 | 0.00 | 2.0 | 98.0 | 0.0 | 1.56 | 0.61 | 0.65 | — | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 5.64 | 0.00 | 2.154 | 3.64 | 0.00 | 9.5 | 90.5 | 0.0 | -0.41 | 1.00 | 0.65 | 0.76 | — | 14474 | 2918 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MJP | 23881 | 2022-12-13 | 2021-04-20 | 4.2 | 4.40 | — | 4.3 | 0.007 | 1.11 | 0.0 | 0.07 | 7.09 | 0.01 | 1.477 | 2.91 | 0.00 | 9.1 | 90.9 | 0.0 | -1.16 | 0.51 | 0.65 | — | 4.4 | 0.002 | 0.62 | 0.0 | 0.05 | 5.76 | 0.00 | 2.279 | 1.26 | 0.00 | 9.8 | 90.2 | 0.0 | -0.62 | 0.43 | 0.57 | 0.70 | — | 14163 | 2818 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 5N8Y | 3602 | 2022-12-15 | 2017-02-24 | 4.7 | 4.76 | — | 4.7 | 0.017 | 2.39 | 6.0 | 0.08 | 7.59 | 0.01 | 0.788 | 16.57 | 0.00 | 4.2 | 94.4 | 1.4 | -1.65 | 0.65 | 0.64 | — | 4.7 | 0.003 | 0.80 | 0.0 | 0.04 | 5.88 | 0.00 | 2.247 | 3.81 | 0.00 | 9.7 | 90.2 | 0.0 | -2.16 | 3.82 | 0.74 | 0.79 | — | 23514 | 4752 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DJP | 7939 | 2022-12-11 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.011 | 2.00 | 0.0 | 0.08 | 5.34 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.003 | 0.86 | 0.0 | 0.05 | 5.94 | 0.00 | 2.257 | 6.66 | 0.00 | 10.3 | 89.7 | 0.0 | -2.64 | 1.07 | 0.81 | 0.74 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 7JG6 | 22312 | 2022-12-14 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.003 | 0.91 | 0.0 | 0.00 | 5.94 | 0.00 | 2.230 | 1.09 | 0.00 | 10.6 | 89.3 | 0.1 | -1.07 | 1.66 | 0.70 | 0.68 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7TKH | 25969 | 2022-12-14 | 2022-01-17 | 4.4 | 7.29 | 4.45 | 4.2 | 0.019 | 2.19 | 0.0 | 0.00 | 6.81 | 0.01 | 2.385 | 0.08 | 0.00 | 3.9 | 94.7 | 1.4 | -0.35 | 0.59 | 0.62 | — | 4.2 | 0.013 | 1.06 | 0.0 | 0.00 | 5.97 | 0.00 | 2.028 | 15.64 | 0.00 | 10.8 | 88.9 | 0.2 | -0.13 | 1.65 | 0.83 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oEF | 20020 | 2022-12-22 | 2019-03-27 | 3.8 | 3.98 | — | 3.8 | 0.007 | 1.67 | 0.0 | 0.07 | 11.76 | 0.01 | 2.376 | 3.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.47 | 0.78 | — | 3.8 | 0.006 | 1.21 | 0.0 | 0.05 | 6.00 | 0.00 | 2.198 | 8.14 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.49 | 0.80 | — | 51240 | 0 | 14 | 0 | 10248 | 0 | 0 | logfile |
✔ | 6PWC | 20505 | 2022-12-11 | 2019-07-22 | 4.9 | 5.55 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.05 | 4.68 | 0.01 | 2.345 | 2.19 | 0.00 | 1.3 | 98.7 | 0.0 | -0.09 | 0.61 | 0.67 | — | 4.6 | 0.003 | 0.65 | 0.0 | 0.04 | 6.10 | 0.00 | 2.135 | 11.73 | 0.00 | 5.6 | 94.4 | 0.0 | 0.10 | 1.53 | 0.61 | 0.58 | — | 5879 | 1055 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DZW | 30915 | 2022-12-13 | 2021-01-26 | 3.45 | 4.19 | 3.55 | 3.3 | 0.019 | 2.27 | 0.0 | 0.00 | 4.81 | 0.01 | 2.240 | 2.28 | 0.00 | 5.1 | 93.3 | 1.6 | -1.27 | 0.44 | 0.25 | — | 3.3 | 0.004 | 0.92 | 0.0 | 0.00 | 6.11 | 0.00 | 2.144 | 5.08 | 0.00 | 15.8 | 84.1 | 0.1 | -2.69 | 2.06 | 0.77 | 0.75 | — | 13452 | 3363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKM | 25974 | 2022-12-14 | 2022-01-17 | 4.5 | 7.58 | 4.88 | 4.3 | 0.019 | 2.22 | 0.0 | 0.00 | 6.78 | 0.01 | 2.385 | 0.12 | 0.00 | 4.3 | 94.2 | 1.5 | -0.44 | 0.59 | 0.59 | — | 4.3 | 0.005 | 0.90 | 0.0 | 0.00 | 6.11 | 0.00 | 2.052 | 17.76 | 0.00 | 11.5 | 88.1 | 0.4 | -1.22 | 1.55 | 0.83 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |