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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8oW1 | 17227 | 2023-11-19 | 2023-04-26 | 3.7 | 5.06 | 5.11 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 18.31 | 0.00 | 1.800 | 10.59 | 1.37 | 3.0 | 97.0 | 0.0 | 0.32 | 0.75 | 0.49 | 0.28 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 19.32 | 0.00 | 2.102 | 15.60 | 0.10 | 3.1 | 96.9 | 0.0 | 1.03 | 4.39 | 0.87 | 0.73 | 0.35 | 78671 | 8932 | 42 | 306 | 0 | 0 | 0 | logfile |
✔ | 6K9F | 9948 | 2023-11-16 | 2019-06-15 | 3.7 | 7.50 | 4.15 | 7.2 | 0.002 | 0.45 | 0.0 | 0.03 | 11.87 | 0.00 | 2.356 | 5.29 | 0.00 | 0.0 | 100.0 | 0.0 | -0.68 | 0.66 | 0.76 | 0.04 | 4.6 | 0.004 | 1.22 | 0.0 | 0.05 | 17.69 | 0.00 | 2.013 | 28.27 | 0.53 | 1.4 | 98.6 | 0.0 | -0.68 | 3.70 | 0.67 | 0.84 | 0.35 | 8484 | 1044 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5L4K | 4002 | 2023-11-19 | 2016-05-25 | 3.9 | 4.00 | — | 4.2 | 0.007 | 0.85 | 3.0 | 0.05 | 16.12 | 0.01 | 1.808 | 5.03 | 3.82 | 11.8 | 85.0 | 3.2 | -6.15 | 0.34 | 0.64 | 0.39 | 4.0 | 0.004 | 0.79 | 0.0 | 0.04 | 17.43 | 0.01 | 1.906 | 18.52 | 0.60 | 9.2 | 90.4 | 0.5 | -1.87 | 1.81 | 0.37 | 0.70 | 0.35 | 79649 | 5000 | 12 | 0 | 0 | 0 | 39990 | logfile |
✔ | 7FG3 | 31577 | 2023-11-14 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.29 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.64 | 0.01 | 2.088 | 24.71 | 0.10 | 15.3 | 84.1 | 0.5 | -3.68 | 0.78 | 0.23 | 0.45 | 0.35 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CHH | 30374 | 2023-11-20 | 2020-07-05 | 3.49 | 2.44 | — | 20.0 | 0.007 | 1.10 | 0.0 | 0.06 | 15.16 | 0.01 | 2.182 | 4.90 | 3.56 | 5.2 | 94.7 | 0.1 | -2.03 | 0.17 | 0.02 | 0.23 | 2.2 | 0.012 | 1.23 | 0.0 | 0.06 | 16.28 | 0.01 | 1.926 | 22.20 | 0.55 | 8.8 | 91.2 | 0.0 | -2.20 | 1.50 | 0.21 | 0.15 | 0.35 | 29029 | 3704 | 17 | 0 | 41 | 0 | 0 | logfile |
✔ | 7YoX | 33989 | 2023-11-16 | 2022-08-02 | 3.95 | 4.33 | 4.09 | 4.1 | 0.006 | 1.31 | 8.0 | 0.10 | 27.06 | 0.01 | 0.786 | 33.58 | 46.70 | 1.0 | 98.8 | 0.2 | 2.84 | 0.82 | 0.70 | 0.48 | 4.1 | 0.003 | 0.80 | 0.0 | 0.05 | 18.73 | 0.00 | 2.122 | 24.63 | 0.44 | 2.8 | 97.2 | 0.0 | 0.19 | 1.10 | 0.84 | 0.77 | 0.35 | 13878 | 1749 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MVU | 24056 | 2023-11-19 | 2021-05-15 | 3.77 | 4.87 | 3.73 | 4.0 | 0.002 | 0.36 | 0.0 | 0.03 | 6.38 | 0.00 | 2.187 | 3.55 | 0.00 | 1.1 | 98.9 | 0.0 | -0.33 | 0.85 | 0.73 | 0.19 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 11.75 | 0.00 | 1.882 | 11.93 | 0.22 | 3.2 | 96.8 | 0.0 | 2.54 | 2.06 | 0.88 | 0.82 | 0.36 | 25645 | 1604 | 2 | 0 | 0 | 0 | 12841 | logfile |
✔ | 6NZo | 0559 | 2023-11-16 | 2019-02-14 | 3.8 | 4.12 | — | 4.0 | 0.007 | 0.93 | 0.0 | 0.06 | 27.12 | 0.01 | 2.313 | 3.45 | 0.12 | 4.8 | 95.1 | 0.1 | -1.08 | 0.78 | 0.76 | 1.27 | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 27.91 | 0.00 | 2.191 | 15.39 | 0.24 | 5.1 | 94.9 | 0.0 | 0.92 | 1.61 | 0.78 | 0.76 | 0.36 | 13738 | 985 | 11 | 290 | 3 | 0 | 0 | logfile |
✔ | 8HSJ | 34999 | 2023-11-17 | 2022-12-19 | 3.6 | 4.38 | 3.44 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.73 | 0.01 | 1.788 | 16.52 | 4.93 | 3.7 | 96.0 | 0.3 | -0.81 | 0.82 | 0.68 | 0.35 | 3.9 | 0.004 | 0.81 | 0.0 | 0.04 | 16.44 | 0.01 | 1.074 | 23.89 | 0.99 | 3.5 | 96.2 | 0.3 | -0.24 | 1.32 | 0.85 | 0.73 | 0.36 | 17244 | 2166 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 8H9R | 34578 | 2023-11-13 | 2022-10-25 | 3.97 | 4.28 | 4.04 | 4.0 | 0.006 | 0.79 | 0.0 | 0.05 | 15.25 | 0.00 | 2.244 | 16.26 | 0.00 | 6.1 | 93.9 | 0.0 | -1.99 | 0.38 | 0.80 | 0.71 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.99 | 0.00 | 2.273 | 14.32 | 1.13 | 4.1 | 95.9 | 0.0 | 2.13 | 1.32 | 0.38 | 0.79 | 0.36 | 3381 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q4W | 13819 | 2023-11-17 | 2021-11-02 | 3.78 | 5.84 | — | 4.5 | 0.005 | 0.84 | 0.0 | 0.05 | 13.85 | 0.01 | 2.186 | 8.26 | 0.52 | 3.1 | 96.8 | 0.0 | -0.36 | 0.83 | 0.65 | -0.36 | 4.5 | 0.004 | 0.73 | 0.0 | 0.05 | 15.20 | 0.00 | 2.119 | 22.47 | 0.67 | 4.1 | 95.9 | 0.0 | -0.03 | 0.63 | 0.92 | 0.84 | 0.36 | 18050 | 2364 | 12 | 0 | 22 | 0 | 0 | logfile |
✔ | 7VZ3 | 32219 | 2023-11-17 | 2021-11-15 | 2.46 | 2.36 | 2.43 | 19.0 | 0.009 | 1.08 | 2.0 | 0.07 | 12.80 | 0.01 | 2.203 | 4.37 | 0.26 | 5.4 | 94.5 | 0.1 | -1.44 | 0.12 | 0.02 | 0.32 | 2.2 | 0.003 | 0.68 | 0.0 | 0.05 | 14.55 | 0.00 | 2.060 | 13.70 | 1.26 | 4.5 | 95.4 | 0.1 | -1.68 | 1.77 | 0.22 | 0.16 | 0.36 | 17415 | 2256 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FiX | 29212 | 2023-11-19 | 2022-12-17 | 3.9 | 4.15 | 3.95 | 3.9 | 0.003 | 0.69 | 0.0 | 0.05 | 14.21 | 0.00 | 1.933 | 14.02 | 0.07 | 12.8 | 87.1 | 0.2 | -2.81 | 0.79 | 0.65 | 0.34 | 3.9 | 0.003 | 0.68 | 0.0 | 0.04 | 15.99 | 0.00 | 2.027 | 12.63 | 0.37 | 4.8 | 95.1 | 0.0 | -0.70 | 2.14 | 0.81 | 0.70 | 0.36 | 25943 | 3185 | 9 | 49 | 3 | 0 | 0 | logfile |
✔ | 3JAD | 6344 | 2023-11-15 | 2015-06-08 | 3.9 | 2.16 | — | 3.8 | 0.008 | 1.33 | 0.0 | 0.06 | 8.45 | 0.00 | 2.250 | 16.87 | 0.43 | 2.7 | 97.3 | 0.0 | -2.13 | 0.68 | 0.72 | 0.33 | 3.0 | 0.003 | 0.76 | 0.0 | 0.04 | 12.95 | 0.00 | 2.195 | 16.00 | 0.17 | 4.0 | 96.0 | 0.0 | 0.22 | 1.23 | 0.70 | 0.77 | 0.37 | 12705 | 1685 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7o6B | 12737 | 2023-11-16 | 2021-04-09 | 3.88 | 4.21 | 4.15 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 11.54 | 0.01 | 2.128 | 6.00 | 0.38 | 4.3 | 95.7 | 0.0 | -0.87 | 0.75 | 0.67 | 0.37 | 3.8 | 0.002 | 0.56 | 0.0 | 0.04 | 14.10 | 0.00 | 2.026 | 9.46 | 0.13 | 3.6 | 96.4 | 0.0 | 0.66 | 1.15 | 0.76 | 0.69 | 0.37 | 14200 | 879 | 1 | 0 | 0 | 0 | 7040 | logfile |
✔ | 8GWB | 34308 | 2023-11-18 | 2022-09-16 | 2.75 | 2.95 | 2.85 | 25.0 | 0.009 | 1.07 | 1.0 | 0.05 | 16.02 | 0.01 | 1.556 | 16.84 | 2.25 | 7.5 | 92.3 | 0.2 | -2.40 | 0.29 | 0.01 | 0.23 | 25.0 | 0.003 | 0.73 | 0.0 | 0.04 | 16.78 | 0.01 | 2.097 | 16.95 | 2.56 | 7.1 | 92.8 | 0.1 | -1.58 | 1.60 | 0.35 | 0.15 | 0.37 | 21879 | 2655 | 16 | 54 | 10 | 7 | 0 | logfile |
✔ | 7TR8 | 26082 | 2023-11-21 | 2022-01-28 | 3.6 | 4.39 | — | 4.1 | 0.002 | 0.54 | 0.0 | 0.04 | 14.37 | 0.00 | 2.037 | 11.91 | 0.03 | 7.5 | 92.2 | 0.4 | -1.00 | 0.75 | 0.46 | -0.02 | 4.1 | 0.003 | 0.85 | 0.0 | 0.05 | 16.82 | 0.01 | 2.069 | 23.21 | 0.26 | 7.9 | 91.8 | 0.3 | -1.86 | 2.22 | 0.83 | 0.71 | 0.38 | 33581 | 4192 | 18 | 45 | 2 | 0 | 0 | logfile |
✔ | 7RTU | 24689 | 2023-11-13 | 2021-08-15 | 3.89 | 4.06 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.31 | 0.00 | 2.175 | 7.11 | 0.16 | 3.1 | 96.9 | 0.0 | 4.32 | 0.55 | 0.69 | 0.15 | 4.1 | 0.003 | 0.56 | 0.0 | 0.04 | 16.58 | 0.00 | 2.211 | 7.03 | 0.31 | 2.4 | 97.6 | 0.0 | 4.14 | 0.30 | 0.62 | 0.73 | 0.38 | 5962 | 754 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8GAP | 29903 | 2023-11-17 | 2023-02-23 | 3.8 | 4.94 | 3.68 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 17.67 | 0.00 | 2.199 | 12.59 | 0.21 | 3.7 | 96.3 | 0.0 | 1.14 | 0.92 | 0.84 | 0.38 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 18.21 | 0.00 | 2.147 | 15.52 | 0.05 | 4.2 | 95.7 | 0.1 | 1.07 | 1.45 | 0.92 | 0.85 | 0.39 | 20630 | 2032 | 9 | 173 | 1 | 0 | 0 | logfile |
✔ | 7SoY | 25363 | 2023-11-15 | 2021-11-01 | 3.4 | 4.73 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 12.63 | 0.00 | 2.231 | 12.96 | 0.37 | 1.7 | 98.3 | 0.0 | 1.32 | 0.90 | 0.83 | 0.53 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 14.33 | 0.00 | 2.076 | 14.51 | 0.22 | 2.4 | 97.6 | 0.0 | 1.48 | 0.49 | 0.91 | 0.85 | 0.39 | 12180 | 1529 | 4 | 0 | 0 | 0 | 0 | logfile |