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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PMi | 20394 | 2023-11-14 | 2019-07-02 | 3.86 | 4.66 | — | 4.1 | 0.012 | 1.26 | 0.0 | 0.06 | 15.81 | 0.01 | 1.949 | 12.35 | 0.24 | 10.7 | 88.9 | 0.4 | -4.48 | 0.69 | 0.51 | 0.20 | 4.1 | 0.005 | 0.76 | 0.0 | 0.04 | 17.30 | 0.01 | 1.808 | 26.87 | 0.58 | 10.9 | 88.9 | 0.1 | -2.64 | 1.01 | 0.86 | 0.78 | 0.40 | 57985 | 3453 | 10 | 110 | 4 | 0 | 28610 | logfile |
✔ | 6X2N | 22012 | 2023-11-22 | 2020-05-20 | 3.9 | 4.07 | — | 3.9 | 0.009 | 1.21 | 1.0 | 0.07 | 17.28 | 0.01 | 2.024 | 10.33 | 0.28 | 8.2 | 91.6 | 0.3 | -2.89 | 0.76 | 0.77 | 0.56 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 18.25 | 0.00 | 2.007 | 15.35 | 0.30 | 7.0 | 93.0 | 0.0 | -1.11 | 1.89 | 0.76 | 0.77 | 0.40 | 36079 | 4316 | 11 | 113 | 4 | 0 | 0 | logfile |
✔ | 6W62 | 21551 | 2023-11-14 | 2020-03-16 | 3.9 | 4.04 | — | 4.0 | 0.003 | 0.64 | 1.0 | 0.04 | 14.23 | 0.00 | 1.883 | 16.29 | 0.00 | 10.2 | 89.4 | 0.3 | -2.04 | 0.71 | 0.67 | 1.02 | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 16.84 | 0.00 | 2.079 | 21.09 | 0.89 | 10.9 | 89.1 | 0.0 | -1.93 | 1.22 | 0.72 | 0.69 | 0.40 | 7387 | 910 | 2 | 24 | 0 | 0 | 0 | logfile |
✔ | 6SXA | 10337 | 2023-11-14 | 2019-09-25 | 3.6 | 5.82 | 4.21 | 4.6 | 0.010 | 1.37 | 5.0 | 0.09 | 15.20 | 0.01 | 2.245 | 15.25 | 3.18 | 10.9 | 88.9 | 0.2 | -4.66 | 0.83 | 0.67 | -0.05 | 4.6 | 0.003 | 0.83 | 0.0 | 0.04 | 15.04 | 0.00 | 2.240 | 11.90 | 0.00 | 6.0 | 93.9 | 0.1 | -0.30 | 1.73 | 0.91 | 0.85 | 0.41 | 7014 | 943 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WVP | 32856 | 2023-11-20 | 2022-02-10 | 3.7 | 3.43 | — | 3.8 | 0.005 | 0.85 | 2.0 | 0.06 | 13.45 | 0.01 | 2.335 | 3.35 | 0.40 | 3.9 | 95.9 | 0.1 | -4.59 | 0.70 | 0.59 | 0.30 | 3.8 | 0.004 | 0.82 | 1.0 | 0.05 | 15.92 | 0.00 | 2.060 | 17.53 | 0.61 | 5.2 | 94.8 | 0.0 | -1.57 | 1.54 | 0.75 | 0.67 | 0.41 | 29601 | 3750 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M18 | 23615 | 2023-11-13 | 2021-03-12 | 3.38 | 4.09 | — | 4.1 | 0.007 | 1.33 | 0.0 | 0.05 | 19.80 | 0.01 | 1.728 | 23.77 | 0.28 | 10.4 | 89.3 | 0.3 | -2.48 | 0.74 | 0.73 | 0.41 | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 19.96 | 0.01 | 2.078 | 17.84 | 0.33 | 8.5 | 91.3 | 0.1 | -1.88 | 0.55 | 0.75 | 0.74 | 0.41 | 54064 | 6904 | 32 | 8 | 16 | 0 | 0 | logfile |
✔ | 7CG4 | 30350 | 2023-11-15 | 2020-06-30 | 3.6 | 4.04 | — | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.90 | 0.00 | 2.192 | 7.47 | 0.34 | 5.1 | 94.9 | 0.0 | -2.88 | 0.49 | 0.77 | 0.53 | 4.0 | 0.004 | 0.88 | 0.0 | 0.04 | 17.36 | 0.00 | 2.148 | 10.42 | 0.51 | 5.3 | 94.7 | 0.1 | 1.07 | 1.96 | 0.45 | 0.76 | 0.41 | 10943 | 1419 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GRQ | 34212 | 2023-11-16 | 2022-09-02 | 3.87 | 4.28 | 3.85 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 25.51 | 0.00 | 2.125 | 14.63 | 0.22 | 3.2 | 96.8 | 0.0 | 0.64 | 0.87 | 0.82 | 0.93 | 3.8 | 0.004 | 0.85 | 0.0 | 0.04 | 27.43 | 0.01 | 2.037 | 22.18 | 1.10 | 5.7 | 94.2 | 0.1 | 0.04 | 0.73 | 0.87 | 0.83 | 0.42 | 14563 | 1084 | 15 | 294 | 4 | 0 | 0 | logfile |
✔ | 7R03 | 14218 | 2023-11-21 | 2022-02-01 | 3.6 | 4.69 | — | 3.8 | 0.006 | 1.15 | 1.0 | 0.06 | 13.88 | 0.01 | 2.224 | 5.84 | 0.00 | 4.2 | 95.8 | 0.0 | -2.18 | 0.86 | 0.76 | 0.62 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 15.11 | 0.00 | 2.112 | 13.25 | 0.05 | 4.3 | 95.7 | 0.0 | 1.22 | 0.47 | 0.86 | 0.77 | 0.42 | 35621 | 4487 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NoG | 0468 | 2023-11-17 | 2019-01-16 | 3.9 | 4.05 | 4.50 | 3.9 | 0.009 | 1.12 | 1.0 | 0.06 | 26.55 | 0.01 | 2.239 | 6.27 | 0.84 | 4.1 | 95.9 | 0.0 | -1.83 | 0.84 | 0.81 | 0.53 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 26.65 | 0.00 | 2.185 | 10.87 | 0.21 | 2.5 | 97.5 | 0.0 | 1.52 | 1.77 | 0.86 | 0.85 | 0.43 | 14929 | 1124 | 12 | 292 | 0 | 0 | 0 | logfile |
✔ | 8GQ6 | 34199 | 2023-11-18 | 2022-08-29 | 3.96 | 3.05 | 3.96 | 3.1 | 0.002 | 0.53 | 0.0 | 0.04 | 13.63 | 0.00 | 2.109 | 11.15 | 0.32 | 6.9 | 93.0 | 0.1 | -0.79 | 0.66 | 0.63 | 0.59 | 3.1 | 0.004 | 0.98 | 0.0 | 0.05 | 17.22 | 0.01 | 1.900 | 24.16 | 0.65 | 10.0 | 89.8 | 0.2 | -1.63 | 0.96 | 0.67 | 0.66 | 0.44 | 22293 | 2742 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 7LC9 | 23270 | 2023-11-13 | 2021-01-10 | 3.2 | 3.25 | — | 3.1 | 0.004 | 0.72 | 0.0 | 0.05 | 17.46 | 0.00 | 1.884 | 31.60 | 18.58 | 13.4 | 86.6 | 0.0 | -4.15 | 0.71 | 0.77 | -0.84 | 3.1 | 0.003 | 0.67 | 0.0 | 0.05 | 16.66 | 0.00 | 2.060 | 26.52 | 1.18 | 10.8 | 89.2 | 0.0 | -3.54 | 0.68 | 0.68 | 0.78 | 0.44 | 3497 | 525 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EUJ | 28614 | 2023-11-15 | 2022-10-18 | 3.36 | 4.07 | 3.84 | 3.7 | 0.006 | 1.22 | 0.0 | 0.06 | 30.89 | 0.01 | 2.233 | 5.43 | 0.00 | 2.6 | 97.4 | 0.0 | -2.60 | 0.71 | 0.76 | 0.82 | 3.7 | 0.004 | 0.81 | 0.0 | 0.04 | 30.30 | 0.01 | 2.070 | 18.77 | 0.81 | 3.3 | 96.7 | 0.0 | 0.39 | 1.30 | 0.71 | 0.78 | 0.44 | 11913 | 747 | 10 | 294 | 0 | 0 | 0 | logfile |
✔ | 8oMA | 16972 | 2023-11-15 | 2023-03-31 | 3.29 | 2.61 | 3.29 | 3.2 | 0.008 | 1.30 | 1.0 | 0.09 | 19.39 | 0.01 | 1.878 | 28.14 | 2.97 | 7.9 | 92.1 | 0.0 | -1.51 | 0.68 | 0.70 | 0.46 | 2.0 | 0.003 | 0.78 | 0.0 | 0.04 | 19.93 | 0.00 | 1.955 | 23.58 | 0.59 | 6.2 | 93.8 | 0.0 | -0.55 | 1.94 | 0.63 | 0.60 | 0.44 | 11379 | 1337 | 6 | 34 | 3 | 0 | 0 | logfile |
✔ | 6oT0 | 20190 | 2023-11-15 | 2019-05-02 | 3.84 | 4.10 | — | 4.4 | 0.009 | 1.13 | 0.0 | 0.07 | 14.50 | 0.01 | 2.191 | 3.20 | 0.79 | 6.3 | 93.7 | 0.0 | -3.15 | 0.53 | 0.75 | 0.80 | 4.4 | 0.003 | 0.78 | 0.0 | 0.04 | 16.41 | 0.00 | 2.100 | 17.65 | 0.53 | 5.3 | 94.7 | 0.0 | -1.29 | 1.37 | 0.55 | 0.77 | 0.44 | 10572 | 1345 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 6XQB | 22288 | 2023-11-16 | 2020-07-09 | 3.4 | 4.22 | — | 3.9 | 0.012 | 1.28 | 0.0 | 0.06 | 12.24 | 0.01 | 2.069 | 13.97 | 0.23 | 15.2 | 84.8 | 0.0 | -5.15 | 0.75 | 0.57 | 0.58 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.30 | 0.00 | 1.956 | 20.89 | 0.57 | 9.1 | 90.9 | 0.0 | -2.52 | 0.95 | 0.76 | 0.59 | 0.45 | 16323 | 1008 | 7 | 15 | 3 | 0 | 7987 | logfile |
✔ | 7CR7 | 30448 | 2023-11-16 | 2020-08-12 | 3.7 | 3.92 | — | 3.8 | 0.008 | 0.79 | 0.0 | 0.04 | 14.63 | 0.00 | 1.825 | 92.66 | 0.00 | 5.6 | 94.2 | 0.2 | -3.89 | 0.64 | 0.69 | 0.59 | 3.8 | 0.004 | 0.90 | 0.0 | 0.04 | 17.53 | 0.00 | 2.011 | 22.09 | 0.59 | 4.2 | 95.8 | 0.0 | -0.01 | 1.52 | 0.63 | 0.70 | 0.45 | 16136 | 1988 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 7P1i | 13161 | 2023-11-14 | 2021-07-01 | 3.15 | 4.49 | 3.18 | 4.4 | 0.002 | 0.57 | 0.0 | 0.04 | 11.18 | 0.00 | 2.265 | 8.39 | 5.90 | 4.3 | 95.7 | 0.0 | 3.38 | 0.55 | 0.71 | 0.60 | 4.3 | 0.004 | 1.18 | 1.0 | 0.05 | 14.98 | 0.00 | 2.140 | 21.37 | 0.14 | 6.1 | 93.9 | 0.0 | 0.34 | 0.96 | 0.57 | 0.72 | 0.46 | 6644 | 884 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WDF | 32437 | 2023-11-21 | 2021-12-21 | 3.9 | 4.20 | — | 4.0 | 0.002 | 0.51 | 0.0 | 0.04 | 7.63 | 0.00 | 2.170 | 7.49 | 0.00 | 4.3 | 95.6 | 0.1 | -1.73 | 0.54 | 0.40 | 0.73 | 4.0 | 0.005 | 0.84 | 0.0 | 0.05 | 14.26 | 0.01 | 2.096 | 22.48 | 0.45 | 5.3 | 94.7 | 0.0 | -1.16 | 1.62 | 0.76 | 0.72 | 0.46 | 31998 | 4101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M20 | 23627 | 2023-11-14 | 2021-03-15 | 3.84 | 4.44 | — | 4.4 | 0.009 | 1.56 | 0.0 | 0.07 | 20.41 | 0.01 | 2.148 | 30.79 | 2.84 | 11.1 | 88.6 | 0.3 | -2.43 | 0.74 | 0.72 | 0.65 | 4.4 | 0.003 | 0.82 | 0.0 | 0.04 | 19.74 | 0.00 | 2.103 | 17.82 | 0.49 | 6.5 | 93.5 | 0.0 | -1.46 | 0.63 | 0.74 | 0.72 | 0.46 | 60705 | 7785 | 36 | 9 | 18 | 0 | 0 | logfile |