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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JMF | 22392 | 2023-08-14 | 2020-07-31 | 4.5 | 5.06 | — | 4.7 | 0.005 | 0.98 | 0.0 | 0.05 | 10.23 | 0.01 | 1.373 | 8.08 | 0.36 | 11.2 | 88.6 | 0.2 | -4.91 | 0.54 | 0.27 | — | 7.7 | 0.004 | 0.94 | 0.0 | 0.05 | 11.59 | 0.01 | 1.145 | 21.14 | 0.00 | 11.3 | 88.5 | 0.2 | -3.66 | 1.53 | 0.76 | 0.56 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 6GYS | 0096 | 2023-08-24 | 2018-07-01 | 4.4 | 5.08 | — | 4.4 | 0.008 | 1.12 | 0.0 | 0.06 | 15.13 | 0.01 | 0.873 | 14.94 | 0.56 | 10.8 | 89.1 | 0.1 | -4.13 | 0.92 | 0.82 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.04 | 15.64 | 0.01 | 1.149 | 29.08 | 0.00 | 10.6 | 89.3 | 0.0 | -1.57 | 1.29 | 0.93 | 0.83 | — | 38890 | 4441 | 16 | 104 | 8 | 0 | 0 | logfile |
✔ | 7BoH | 12243 | 2023-08-27 | 2021-01-25 | 2.82 | 3.09 | 2.90 | 2.8 | 0.006 | 0.62 | 4.0 | 0.04 | 13.86 | 0.02 | 0.657 | 6.27 | 0.00 | 3.3 | 96.7 | 0.0 | -1.47 | 0.82 | 0.80 | 2.52 | 2.8 | 0.007 | 0.74 | 0.0 | 0.04 | 15.09 | 0.01 | 1.151 | 13.60 | 2.33 | 4.1 | 95.9 | 0.0 | -0.12 | 1.22 | 0.87 | 0.90 | 2.24 | 52154 | 2445 | 25 | 1527 | 157 | 0 | 0 | logfile |
✔ | 6QC3 | 4495 | 2023-08-24 | 2018-12-26 | 4.2 | 4.28 | 4.21 | 4.2 | 0.010 | 1.32 | 1.0 | 0.85 | 12.09 | 0.01 | 1.873 | 8.18 | 0.75 | 11.7 | 88.1 | 0.1 | -3.94 | 0.67 | 0.75 | — | 4.2 | 0.008 | 1.49 | 0.0 | 0.26 | 13.53 | 0.01 | 1.159 | 18.23 | 0.10 | 10.5 | 89.5 | 0.0 | -1.30 | 1.75 | 0.69 | 0.78 | — | 96897 | 12010 | 84 | 0 | 77 | 0 | 0 | logfile |
✔ | 7UPH | 26666 | 2023-08-24 | 2022-04-15 | 4.18 | 5.35 | 4.33 | 4.2 | 0.007 | 1.00 | 1.0 | 0.05 | 18.96 | 0.02 | 1.193 | 122.79 | 0.02 | 12.5 | 86.5 | 1.0 | -2.90 | 0.63 | 0.35 | — | 4.3 | 0.007 | 0.88 | 1.0 | 0.04 | 18.39 | 0.01 | 1.165 | 109.33 | 0.02 | 15.7 | 83.6 | 0.7 | -2.80 | 1.34 | 0.87 | 0.78 | — | 141080 | 5442 | 49 | 4556 | 0 | 0 | 625 | logfile |
✔ | 7TR9 | 26083 | 2023-08-22 | 2022-01-28 | 3.9 | 4.30 | — | 4.1 | 0.003 | 0.68 | 2.0 | 0.05 | 13.00 | 0.00 | 1.387 | 16.20 | 0.17 | 8.7 | 90.9 | 0.4 | -2.44 | 0.80 | 0.72 | 0.00 | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.90 | 0.00 | 1.167 | 26.68 | 0.32 | 9.2 | 90.5 | 0.3 | -2.23 | 2.94 | 0.82 | 0.78 | 0.68 | 34208 | 4192 | 20 | 75 | 2 | 0 | 0 | logfile |
✔ | 7QV9 | 14171 | 2023-08-25 | 2022-01-20 | 3.5 | 3.56 | — | 3.5 | 0.021 | 2.21 | 183.0 | 0.13 | 14.76 | 0.01 | 1.898 | 37.15 | 10.34 | 8.2 | 90.5 | 1.3 | -2.97 | 0.78 | 0.71 | 1.18 | 3.5 | 0.009 | 0.91 | 0.0 | 0.05 | 16.61 | 0.01 | 1.170 | 14.17 | 0.54 | 9.9 | 90.0 | 0.2 | -1.80 | 1.83 | 0.79 | 0.73 | 1.43 | 41491 | 5245 | 19 | 72 | 9 | 0 | 0 | logfile |
✔ | 8GYW | 34378 | 2023-08-09 | 2022-09-24 | 3.9 | 3.93 | 3.77 | 4.0 | 0.008 | 1.46 | 0.0 | 0.08 | 15.18 | 0.02 | 2.008 | 6.48 | 0.30 | 0.8 | 99.2 | 0.0 | 1.24 | 0.46 | 0.73 | 1.92 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 16.46 | 0.00 | 1.170 | 13.03 | 1.21 | 1.7 | 98.3 | 0.0 | 2.64 | 1.27 | 0.50 | 0.76 | 0.83 | 6076 | 760 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 5GAH | 8004 | 2023-08-23 | 2015-11-26 | 3.8 | 3.97 | — | 3.9 | 0.008 | 1.10 | 0.0 | 0.05 | 15.97 | 0.01 | 1.737 | 8.30 | 11.31 | 3.3 | 96.7 | 0.1 | -3.33 | 0.73 | 0.85 | 1.12 | 3.9 | 0.004 | 0.62 | 0.0 | 0.03 | 15.25 | 0.00 | 1.170 | 14.30 | 0.97 | 3.9 | 96.0 | 0.1 | -0.54 | 1.16 | 0.73 | 0.87 | 1.46 | 94027 | 3595 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 7LXT | 23574 | 2023-08-27 | 2021-03-05 | 3.4 | 3.70 | 3.40 | 3.7 | 0.009 | 0.85 | 0.0 | 0.05 | 14.67 | 0.00 | 1.972 | 18.04 | 0.79 | 10.7 | 89.3 | 0.0 | -2.90 | 0.75 | 0.82 | 2.36 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 16.34 | 0.00 | 1.178 | 13.01 | 0.40 | 7.5 | 92.5 | 0.0 | -1.35 | 0.43 | 0.76 | 0.84 | 1.65 | 50536 | 6318 | 34 | 0 | 6 | 0 | 0 | logfile |
✔ | 7K0T | 22616 | 2023-08-12 | 2020-09-05 | 4.3 | 4.52 | 4.29 | 4.2 | 0.003 | 0.65 | 1.0 | 0.04 | 13.80 | 0.00 | 1.909 | 7.65 | 0.63 | 7.5 | 92.4 | 0.2 | -0.19 | 0.84 | 0.76 | — | 4.2 | 0.036 | 2.69 | 59.0 | 0.11 | 15.80 | 0.02 | 1.195 | 109.81 | 0.00 | 43.4 | 55.0 | 1.6 | -7.43 | 1.92 | 0.86 | 0.83 | — | 115905 | 12820 | 8 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7QH7 | 13967 | 2023-08-21 | 2021-12-10 | 2.89 | 4.42 | — | 2.2 | 0.007 | 0.72 | 0.0 | 0.04 | 15.34 | 0.00 | 1.147 | 6.45 | 3.11 | 7.6 | 92.3 | 0.1 | -1.65 | 0.66 | 0.59 | 2.10 | 2.3 | 0.003 | 0.75 | 0.0 | 0.04 | 15.88 | 0.00 | 1.197 | 14.71 | 2.30 | 5.0 | 95.0 | 0.0 | -0.36 | 0.71 | 0.89 | 0.85 | 1.59 | 85397 | 7017 | 59 | 1312 | 53 | 14 | 0 | logfile |
✔ | 7KSo | 23021 | 2023-08-13 | 2020-11-23 | 3.9 | 4.08 | — | 4.0 | 0.004 | 0.73 | 1.0 | 0.05 | 11.73 | 0.00 | 2.151 | 3.83 | 0.29 | 4.7 | 95.3 | 0.0 | -3.99 | 0.68 | 0.74 | 1.12 | 4.0 | 0.005 | 0.76 | 0.0 | 0.05 | 15.43 | 0.00 | 1.198 | 14.39 | 0.59 | 6.5 | 93.5 | 0.0 | -1.66 | 1.53 | 0.73 | 0.82 | 1.59 | 13075 | 1690 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7R43 | 14261 | 2023-08-16 | 2022-02-08 | 2.4 | 2.41 | — | 2.5 | 0.007 | 0.79 | 0.0 | 0.84 | 15.03 | 0.00 | 1.899 | 3.40 | 0.01 | 2.5 | 97.4 | 0.0 | 0.39 | 0.69 | 0.89 | 5.73 | 2.4 | 0.007 | 1.30 | 0.0 | 0.25 | 16.38 | 0.00 | 1.204 | 4.60 | 0.56 | 1.6 | 98.4 | 0.0 | 1.60 | 0.31 | 0.69 | 0.90 | 4.85 | 68334 | 8188 | 109 | 0 | 47 | 885 | 0 | logfile |
✔ | 7KTP | 23025 | 2023-08-12 | 2020-11-24 | 4.8 | 4.79 | — | 4.6 | 0.005 | 0.73 | 0.0 | 0.05 | 11.99 | 0.00 | 2.221 | 2.15 | 0.00 | 4.5 | 95.5 | 0.0 | -4.13 | 0.71 | 0.69 | — | 4.6 | 0.003 | 0.67 | 0.0 | 0.04 | 12.92 | 0.00 | 1.209 | 15.22 | 0.00 | 5.3 | 94.7 | 0.0 | -0.82 | 2.61 | 0.75 | 0.77 | — | 12008 | 1544 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 7YLW | 33919 | 2023-08-16 | 2022-07-27 | 3.39 | 2.63 | 3.52 | 3.0 | 0.008 | 1.04 | 31.0 | 0.07 | 11.34 | 0.01 | 1.306 | 5.69 | 1.53 | 4.1 | 95.5 | 0.4 | -3.65 | 0.69 | 0.68 | 0.71 | 3.0 | 0.004 | 0.86 | 0.0 | 0.05 | 16.94 | 0.00 | 1.217 | 16.30 | 0.82 | 4.8 | 95.2 | 0.0 | -0.42 | 0.98 | 0.77 | 0.78 | 1.28 | 70338 | 9105 | 49 | 0 | 47 | 14 | 0 | logfile |
✔ | 6X80 | 22088 | 2023-08-24 | 2020-06-01 | 3.5 | 3.69 | — | 3.5 | 0.006 | 0.64 | 0.0 | 0.81 | 19.52 | 0.00 | 1.310 | 8.52 | 0.01 | 8.5 | 91.3 | 0.2 | -2.33 | 0.48 | 0.90 | 2.98 | 3.5 | 0.003 | 0.68 | 0.0 | 0.06 | 17.50 | 0.00 | 1.229 | 8.08 | 0.72 | 5.3 | 94.7 | 0.0 | 0.79 | 1.21 | 0.48 | 0.89 | 2.44 | 97482 | 12628 | 44 | 0 | 374 | 0 | 0 | logfile |
✔ | 7oH5 | 12894 | 2023-08-12 | 2021-05-09 | 2.9 | 3.43 | 2.96 | 3.3 | 0.006 | 1.14 | 0.0 | 0.04 | 10.55 | 0.00 | 1.656 | 5.05 | 1.19 | 4.6 | 95.4 | 0.0 | -4.15 | 0.65 | 0.75 | 3.22 | 3.4 | 0.003 | 0.83 | 0.0 | 0.04 | 14.74 | 0.00 | 1.236 | 7.59 | 1.75 | 4.0 | 95.9 | 0.1 | -0.60 | 2.18 | 0.68 | 0.78 | 2.52 | 11603 | 1419 | 8 | 0 | 14 | 2 | 0 | logfile |
✔ | 3JAP | 3048 | 2023-08-24 | 2015-06-18 | 4.9 | 5.03 | 5.08 | 5.0 | 0.007 | 1.39 | 79.0 | 0.11 | 22.42 | 0.01 | 1.307 | 9.48 | 13.17 | 10.9 | 85.8 | 3.4 | -1.68 | 0.68 | 0.69 | — | 4.9 | 0.004 | 0.77 | 0.0 | 0.04 | 18.91 | 0.01 | 1.237 | 23.76 | 0.03 | 10.5 | 88.7 | 0.8 | -1.59 | 2.18 | 0.71 | 0.80 | — | 98333 | 7272 | 53 | 1869 | 255 | 0 | 0 | logfile |
✔ | 5VZL | 8749 | 2023-08-13 | 2017-05-29 | 3.9 | 4.38 | — | 19.0 | 0.006 | 0.96 | 0.0 | 0.05 | 14.28 | 0.01 | 2.216 | 7.72 | 0.25 | 8.4 | 91.6 | 0.0 | -4.13 | 0.31 | 0.03 | -0.03 | 17.0 | 0.002 | 0.64 | 0.0 | 0.04 | 15.49 | 0.00 | 1.241 | 12.10 | 0.08 | 5.0 | 95.0 | 0.0 | -1.15 | 1.21 | 0.38 | 0.18 | 0.61 | 13915 | 1451 | 3 | 115 | 1 | 0 | 0 | logfile |