The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CG6 | 16632 | 2024-03-23 | 2023-02-03 | 3.4 | 4.03 | 3.52 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 16.92 | 0.01 | 1.945 | 6.90 | 0.20 | 5.5 | 94.4 | 0.1 | -0.06 | 0.83 | 0.79 | 1.60 | 3.7 | 0.004 | 0.56 | 0.0 | 0.04 | 16.78 | 0.00 | 1.266 | 8.91 | 1.29 | 7.2 | 92.8 | 0.0 | -0.37 | 0.37 | 0.84 | 0.82 | 1.78 | 37715 | 2506 | 4 | 0 | 1 | 0 | 18739 | logfile |
✔ | 6TA3 | 10421 | 2024-03-14 | 2019-10-29 | 3.8 | 4.18 | — | 3.9 | 0.024 | 2.45 | 4.0 | 0.08 | 18.96 | 0.01 | 0.317 | 210.72 | 16.02 | 0.8 | 99.2 | 0.0 | 1.86 | 0.67 | 0.49 | 0.26 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 18.35 | 0.01 | 1.266 | 30.60 | 4.47 | 4.1 | 95.9 | 0.0 | -0.17 | 2.46 | 0.78 | 0.74 | 0.37 | 9491 | 1201 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 6TZ1 | 20586 | 2024-03-16 | 2019-08-09 | 3.4 | 3.44 | — | 3.4 | 0.008 | 0.92 | 0.0 | 0.05 | 10.92 | 0.01 | 2.207 | 4.35 | 0.47 | 5.1 | 94.9 | 0.0 | -3.92 | 0.54 | 0.85 | 3.95 | 3.4 | 0.004 | 0.59 | 0.0 | 0.04 | 14.88 | 0.00 | 1.269 | 6.77 | 3.29 | 4.2 | 95.8 | 0.0 | -0.46 | 1.24 | 0.53 | 0.87 | 3.33 | 14212 | 1709 | 5 | 23 | 1 | 0 | 0 | logfile |
✔ | 6Q98 | 4477 | 2024-03-02 | 2018-12-17 | 4.3 | 4.44 | — | 4.4 | 0.008 | 1.20 | 0.0 | 0.15 | 25.15 | 0.02 | 1.954 | 10.00 | 0.48 | 12.0 | 87.9 | 0.0 | -4.86 | 0.83 | 0.80 | — | 4.4 | 0.005 | 0.78 | 0.0 | 0.04 | 24.25 | 0.01 | 1.270 | 23.40 | 0.04 | 12.3 | 87.7 | 0.0 | -2.91 | 1.26 | 0.82 | 0.80 | — | 153878 | 6132 | 71 | 4920 | 431 | 2 | 0 | logfile |
✔ | 6ZLQ | 11272 | 2024-03-22 | 2020-07-01 | 3.3 | 3.41 | — | 3.3 | 0.009 | 0.74 | 0.0 | 0.04 | 17.49 | 0.00 | 0.983 | 15.93 | 8.48 | 3.6 | 96.4 | 0.0 | -3.01 | 0.81 | 0.83 | 1.76 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 18.43 | 0.00 | 1.271 | 13.81 | 4.58 | 1.0 | 99.0 | 0.0 | 3.51 | 0.69 | 0.80 | 0.84 | 1.09 | 33823 | 4185 | 38 | 0 | 16 | 0 | 0 | logfile |
✔ | 6QC3 | 4495 | 2024-03-20 | 2018-12-26 | 4.2 | 4.28 | 4.21 | 4.2 | 0.010 | 1.32 | 1.0 | 0.85 | 12.18 | 0.01 | 1.873 | 8.18 | 0.75 | 11.7 | 88.1 | 0.1 | -3.94 | 0.67 | 0.75 | — | 4.2 | 0.007 | 1.49 | 0.0 | 0.26 | 13.53 | 0.01 | 1.273 | 18.28 | 0.08 | 10.6 | 89.3 | 0.0 | -1.28 | 1.75 | 0.69 | 0.78 | — | 96897 | 12010 | 84 | 0 | 77 | 0 | 0 | logfile |
✔ | 7NKU | 12448 | 2024-03-19 | 2021-02-19 | 3.4 | 3.03 | — | 3.1 | 0.008 | 0.94 | 0.0 | 0.05 | 15.33 | 0.01 | 1.986 | 17.36 | 0.00 | 9.2 | 90.8 | 0.0 | -0.63 | 0.74 | 0.77 | 1.90 | 3.1 | 0.003 | 0.74 | 0.0 | 0.04 | 17.72 | 0.01 | 1.273 | 14.44 | 3.63 | 7.0 | 93.0 | 0.0 | 0.24 | 0.64 | 0.73 | 0.79 | 1.25 | 25332 | 3252 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6LN9 | 0928 | 2024-03-11 | 2019-12-28 | 3.4 | 3.61 | 3.06 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 12.32 | 0.00 | 2.075 | 7.70 | 0.00 | 4.1 | 95.9 | 0.0 | -3.36 | 0.63 | 0.73 | 1.41 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.89 | 0.00 | 1.273 | 10.11 | 4.06 | 4.7 | 95.3 | 0.0 | -0.48 | 0.51 | 0.62 | 0.76 | 1.24 | 7612 | 987 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6o9J | 0661 | 2024-03-20 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 24.37 | 0.01 | 0.154 | 55.29 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.011 | 1.15 | 6.0 | 0.05 | 24.09 | 0.01 | 1.282 | 34.98 | 8.65 | 25.0 | 72.2 | 2.9 | -4.91 | 1.31 | 0.80 | 0.77 | 0.18 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 7UA9 | 26416 | 2024-03-18 | 2022-03-11 | 3.59 | 3.94 | — | 2.0 | 0.010 | 0.88 | 4.0 | 0.04 | 14.89 | 0.01 | 1.935 | 14.89 | 1.82 | 3.1 | 96.8 | 0.1 | 0.41 | 0.85 | 0.79 | 2.17 | 1.9 | 0.010 | 0.71 | 4.0 | 0.04 | 15.09 | 0.00 | 1.285 | 13.04 | 0.52 | 3.2 | 96.8 | 0.1 | 1.16 | 0.96 | 0.86 | 0.81 | 2.37 | 138656 | 17324 | 12 | 0 | 20 | 0 | 0 | logfile |
✔ | 7R4F | 14302 | 2024-03-13 | 2022-02-08 | 2.4 | 2.39 | — | 2.3 | 0.007 | 0.79 | 0.0 | 0.87 | 18.77 | 0.01 | 1.904 | 2.94 | 1.29 | 2.5 | 97.5 | 0.0 | 0.66 | 0.73 | 0.90 | 5.70 | 2.3 | 0.007 | 1.34 | 0.0 | 0.26 | 17.19 | 0.00 | 1.286 | 4.06 | 1.38 | 1.8 | 98.2 | 0.0 | 1.57 | 0.26 | 0.74 | 0.91 | 5.18 | 65494 | 7788 | 114 | 0 | 44 | 1415 | 0 | logfile |
✔ | 6K32 | 9907 | 2024-03-12 | 2019-05-16 | 3.2 | 3.73 | — | 3.8 | 0.009 | 1.22 | 1.0 | 0.07 | 11.62 | 0.01 | 1.345 | 10.22 | 1.25 | 6.3 | 93.3 | 0.3 | -4.88 | 0.28 | 0.72 | 1.49 | 3.7 | 0.005 | 0.79 | 0.0 | 0.05 | 16.47 | 0.00 | 1.292 | 12.86 | 4.47 | 6.1 | 93.9 | 0.1 | -1.34 | 1.61 | 0.31 | 0.83 | 2.37 | 61364 | 7723 | 10 | 8 | 6 | 0 | 0 | logfile |
✔ | 6W98 | 21580 | 2024-03-15 | 2020-03-22 | 2.9 | 3.47 | 2.92 | 3.3 | 0.010 | 0.86 | 0.0 | 0.05 | 13.56 | 0.01 | 1.990 | 2.62 | 0.00 | 4.4 | 95.6 | 0.1 | -4.30 | 0.67 | 0.84 | 3.77 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 14.37 | 0.00 | 1.296 | 6.69 | 1.91 | 3.9 | 96.1 | 0.0 | -0.08 | 0.47 | 0.65 | 0.84 | 3.03 | 10317 | 1389 | 3 | 0 | 4 | 1 | 0 | logfile |
✔ | 5MMJ | 3532 | 2024-03-11 | 2016-12-10 | 3.6 | 3.88 | — | 3.6 | 0.008 | 1.15 | 0.0 | 0.05 | 23.41 | 0.01 | 1.774 | 10.61 | 7.28 | 4.9 | 94.8 | 0.3 | -3.46 | 0.92 | 0.86 | 1.28 | 3.6 | 0.008 | 0.80 | 0.0 | 0.04 | 23.14 | 0.01 | 1.297 | 22.45 | 5.10 | 6.2 | 93.7 | 0.1 | -0.68 | 2.11 | 0.92 | 0.86 | 1.15 | 55315 | 2806 | 31 | 1484 | 359 | 0 | 0 | logfile |
✔ | 6YNX | 10859 | 2024-03-19 | 2020-04-14 | 2.5 | 2.72 | 2.48 | 2.6 | 0.010 | 1.00 | 0.0 | 0.04 | 16.89 | 0.00 | 1.374 | 3.40 | 0.30 | 2.3 | 97.7 | 0.0 | -2.86 | 0.73 | 0.89 | 5.87 | 2.6 | 0.004 | 0.54 | 0.0 | 0.04 | 16.46 | 0.00 | 1.298 | 7.36 | 0.81 | 2.9 | 97.1 | 0.0 | 1.23 | 1.04 | 0.74 | 0.90 | 4.98 | 134171 | 7929 | 64 | 0 | 50 | 0 | 64331 | logfile |
✔ | 7LAS | 23250 | 2024-03-17 | 2021-01-06 | 4.4 | 4.09 | — | 4.1 | 0.009 | 1.37 | 0.0 | 0.06 | 19.05 | 0.01 | 1.386 | 5.56 | 7.55 | 1.5 | 98.5 | 0.0 | -2.56 | 0.60 | 0.75 | — | 4.1 | 0.003 | 0.71 | 0.0 | 0.04 | 16.25 | 0.00 | 1.300 | 13.09 | 0.00 | 6.5 | 93.5 | 0.0 | -1.77 | 1.93 | 0.62 | 0.78 | — | 18011 | 1098 | 12 | 24 | 8 | 0 | 8624 | logfile |
✔ | 8J01 | 35880 | 2024-03-22 | 2023-04-09 | 3.1 | 3.44 | 3.20 | 3.4 | 0.011 | 0.93 | 0.0 | 0.03 | 19.64 | 0.00 | 1.926 | 10.97 | 0.60 | 3.0 | 97.0 | 0.0 | 2.35 | 0.68 | 0.77 | 1.72 | 3.3 | 0.004 | 0.90 | 0.0 | 0.03 | 17.18 | 0.01 | 1.309 | 10.70 | 2.57 | 3.2 | 96.8 | 0.0 | 2.28 | 1.04 | 0.68 | 0.78 | 1.68 | 31852 | 1988 | 12 | 0 | 12 | 0 | 15620 | logfile |
✔ | 7o6Y | 12741 | 2024-03-12 | 2021-04-12 | 3.4 | 3.51 | 3.37 | 3.4 | 0.009 | 1.09 | 11.0 | 0.10 | 17.45 | 0.01 | 1.892 | 15.31 | 0.65 | 3.5 | 96.4 | 0.1 | -0.16 | 0.68 | 0.83 | 2.82 | 3.4 | 0.005 | 0.66 | 0.0 | 0.04 | 17.00 | 0.00 | 1.311 | 11.02 | 2.47 | 3.6 | 96.3 | 0.0 | 0.21 | 1.03 | 0.71 | 0.86 | 2.50 | 64866 | 7927 | 67 | 0 | 49 | 0 | 0 | logfile |
✔ | 7LoK | 23465 | 2024-03-16 | 2021-02-10 | 3.9 | 4.11 | — | 4.0 | 0.007 | 1.14 | 1.0 | 0.07 | 15.06 | 0.01 | 1.226 | 14.88 | 0.39 | 11.9 | 88.0 | 0.2 | -5.60 | 0.76 | 0.77 | 2.26 | 4.0 | 0.003 | 0.74 | 0.0 | 0.05 | 15.14 | 0.00 | 1.315 | 10.26 | 3.44 | 7.5 | 92.4 | 0.1 | -3.07 | 1.24 | 0.77 | 0.82 | 1.63 | 14498 | 1999 | 19 | 0 | 32 | 0 | 0 | logfile |
✔ | 8UCW | 42142 | 2024-03-16 | 2023-09-27 | 3.64 | 4.65 | 3.41 | 2.7 | 0.008 | 0.57 | 0.0 | 0.04 | 20.73 | 0.00 | 2.087 | 3.44 | 0.00 | 3.0 | 97.0 | 0.0 | 1.69 | 0.87 | 0.75 | 0.97 | 2.5 | 0.002 | 0.53 | 0.0 | 0.04 | 20.24 | 0.00 | 1.321 | 6.44 | 1.03 | 3.0 | 97.0 | 0.0 | 1.87 | 1.27 | 0.89 | 0.80 | 0.85 | 15967 | 868 | 5 | 61 | 4 | 0 | 7703 | logfile |