The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8B64 | 15862 | 2023-02-23 | 2022-09-26 | 2.589 | 2.35 | 2.34 | 2.5 | 0.020 | 4.46 | 0.0 | 0.04 | 20.81 | 0.00 | 1.980 | 8.44 | 1.19 | 0.8 | 99.2 | 0.0 | 3.50 | 0.67 | 0.88 | 4.98 | 2.5 | 0.004 | 1.15 | 0.0 | 0.04 | 19.92 | 0.00 | 1.956 | 7.44 | 1.57 | 1.1 | 98.9 | 0.0 | 2.97 | 0.89 | 0.67 | 0.90 | 4.87 | 21678 | 2249 | 66 | 0 | 75 | 0 | 0 | logfile |
✔ | 8DKX | 27493 | 2023-02-17 | 2022-07-06 | 3.0 | 3.53 | 3.00 | 3.4 | 0.005 | 0.75 | 1.0 | 0.05 | 13.28 | 0.00 | 2.099 | 8.39 | 0.62 | 5.5 | 94.5 | 0.0 | -3.42 | 0.62 | 0.84 | 4.43 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.64 | 0.00 | 2.169 | 7.12 | 2.28 | 5.1 | 94.9 | 0.0 | -0.23 | 0.91 | 0.56 | 0.84 | 3.75 | 4370 | 553 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TGE | 25880 | 2023-02-23 | 2022-01-07 | 3.68 | 4.05 | 3.74 | 3.7 | 0.004 | 0.73 | 0.0 | 0.05 | 13.25 | 0.01 | 2.270 | 3.50 | 0.09 | 3.8 | 96.2 | 0.0 | -1.30 | 0.80 | 0.72 | 0.89 | 3.7 | 0.007 | 0.75 | 0.0 | 0.05 | 14.37 | 0.00 | 1.955 | 13.78 | 0.17 | 5.9 | 94.1 | 0.0 | -0.83 | 1.58 | 0.82 | 0.76 | 0.92 | 21461 | 2677 | 15 | 0 | 40 | 0 | 0 | logfile |
✔ | 8DNM | 27574 | 2023-02-21 | 2022-07-11 | 2.76 | 3.58 | 2.88 | 3.4 | 0.006 | 0.85 | 4.0 | 0.05 | 12.93 | 0.01 | 2.217 | 8.35 | 0.86 | 3.6 | 96.4 | 0.0 | -1.12 | 0.83 | 0.80 | 3.99 | 3.4 | 0.004 | 0.55 | 0.0 | 0.04 | 14.81 | 0.00 | 2.229 | 5.95 | 0.56 | 2.8 | 97.2 | 0.0 | 0.78 | 0.56 | 0.83 | 0.87 | 3.19 | 14880 | 1932 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VAQ | 31858 | 2023-02-27 | 2021-08-30 | 3.6 | 3.18 | 3.57 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 13.52 | 0.00 | 1.066 | 5.47 | 0.00 | 1.8 | 98.2 | 0.0 | 1.14 | 0.57 | 0.77 | 2.21 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 16.58 | 0.00 | 1.859 | 8.32 | 0.29 | 3.2 | 96.8 | 0.0 | 0.04 | 0.74 | 0.60 | 0.79 | 2.18 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7SL3 | 25190 | 2023-02-22 | 2021-10-22 | 3.4 | 3.65 | — | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 13.25 | 0.00 | 2.238 | 8.44 | 0.32 | 6.4 | 93.4 | 0.2 | -0.71 | 0.80 | 0.81 | 2.46 | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 14.42 | 0.00 | 2.193 | 9.89 | 0.13 | 6.4 | 93.6 | 0.0 | -0.80 | 1.14 | 0.81 | 0.84 | 2.59 | 14016 | 1736 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P3Q | 13182 | 2023-02-19 | 2021-07-08 | 3.12 | 3.23 | 3.11 | 3.2 | 0.009 | 1.34 | 0.0 | 0.07 | 14.87 | 0.01 | 2.218 | 11.33 | 0.40 | 4.5 | 95.5 | 0.0 | 0.44 | 0.68 | 0.81 | 1.87 | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 15.72 | 0.00 | 2.092 | 17.63 | 0.40 | 4.2 | 95.8 | 0.0 | 0.83 | 0.82 | 0.69 | 0.86 | 1.79 | 9632 | 1176 | 16 | 0 | 24 | 0 | 0 | logfile |
✔ | 7LiD | 23374 | 2023-02-20 | 2021-01-27 | 2.9 | 3.96 | — | 3.9 | 0.006 | 0.88 | 0.0 | 0.04 | 15.13 | 0.01 | 2.330 | 3.66 | 1.47 | 3.5 | 96.5 | 0.0 | -2.01 | 0.69 | 0.76 | 0.95 | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 17.07 | 0.00 | 2.263 | 7.93 | 2.29 | 2.5 | 97.5 | 0.0 | 2.49 | 0.55 | 0.52 | 0.70 | 0.79 | 12140 | 1524 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8DKi | 27489 | 2023-02-17 | 2022-07-05 | 3.32 | 3.57 | 3.29 | 3.6 | 0.003 | 0.64 | 0.0 | 0.05 | 13.79 | 0.00 | 2.204 | 9.78 | 0.21 | 4.6 | 95.4 | 0.0 | -0.62 | 0.62 | 0.84 | 2.61 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 15.85 | 0.00 | 2.212 | 10.59 | 0.21 | 6.6 | 93.4 | 0.0 | -0.10 | 0.92 | 0.61 | 0.86 | 2.61 | 4365 | 552 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YRG | 10889 | 2023-02-24 | 2020-04-20 | 4.8 | 6.94 | — | 7.9 | 0.009 | 1.41 | 18.0 | 0.08 | 13.69 | 0.01 | 1.270 | 31.61 | 0.48 | 9.4 | 90.3 | 0.3 | -2.26 | 0.66 | 0.32 | — | 7.9 | 0.003 | 0.74 | 0.0 | 0.04 | 13.07 | 0.00 | 2.157 | 15.69 | 0.00 | 9.7 | 90.2 | 0.1 | -1.41 | 3.45 | 0.74 | 0.50 | — | 21992 | 2736 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PXW | 20523 | 2023-02-20 | 2019-07-28 | 3.1 | 3.31 | — | 3.3 | 0.008 | 0.99 | 0.0 | 0.06 | 9.83 | 0.01 | 2.254 | 4.99 | 0.16 | 9.9 | 89.6 | 0.5 | -4.04 | 0.76 | 0.82 | 4.11 | 3.3 | 0.002 | 0.56 | 0.0 | 0.04 | 13.59 | 0.00 | 2.236 | 4.86 | 0.00 | 7.3 | 92.7 | 0.0 | -2.03 | 0.79 | 0.75 | 0.82 | 3.36 | 11198 | 1386 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P37 | 13178 | 2023-02-21 | 2021-07-07 | 2.96 | 3.18 | 3.03 | 3.2 | 0.005 | 0.85 | 0.0 | 0.05 | 11.41 | 0.00 | 2.280 | 7.21 | 0.00 | 2.4 | 97.6 | 0.0 | 1.79 | 0.68 | 0.76 | 2.89 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 15.53 | 0.00 | 2.170 | 9.70 | 2.18 | 2.5 | 97.5 | 0.0 | 1.44 | 0.92 | 0.70 | 0.81 | 3.10 | 14496 | 1764 | 24 | 0 | 36 | 0 | 0 | logfile |
✔ | 7TPE | 26052 | 2023-02-24 | 2022-01-25 | 4.0 | 4.59 | — | 4.0 | 0.013 | 1.73 | 6.0 | 0.09 | 13.24 | 0.01 | 2.501 | 0.20 | 1.83 | 8.6 | 90.3 | 1.1 | -1.39 | 0.84 | 0.79 | — | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 13.60 | 0.00 | 2.155 | 9.04 | 0.13 | 6.1 | 93.9 | 0.1 | -0.39 | 0.48 | 0.85 | 0.84 | — | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7VAL | 31849 | 2023-02-27 | 2021-08-30 | 3.1 | 2.59 | 2.99 | 2.9 | 0.003 | 0.55 | 0.0 | 0.04 | 12.97 | 0.00 | 1.776 | 3.43 | 0.00 | 1.5 | 98.5 | 0.0 | 1.44 | 0.56 | 0.80 | 3.46 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.08 | 0.00 | 1.896 | 5.72 | 0.13 | 2.2 | 97.8 | 0.0 | 0.55 | 0.57 | 0.66 | 0.87 | 3.41 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 7ToV | 26039 | 2023-02-24 | 2022-01-24 | 3.16 | 3.39 | — | 3.2 | 0.013 | 1.79 | 5.0 | 0.09 | 12.54 | 0.01 | 2.515 | 0.07 | 0.89 | 5.8 | 93.7 | 0.4 | -0.81 | 0.83 | 0.86 | 4.13 | 3.2 | 0.005 | 0.63 | 0.0 | 0.04 | 13.35 | 0.00 | 2.010 | 4.21 | 0.04 | 4.6 | 95.3 | 0.1 | 0.14 | 0.51 | 0.85 | 0.89 | 3.41 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7SV7 | 25445 | 2023-02-19 | 2021-11-18 | 3.8 | 3.26 | — | 3.9 | 0.004 | 1.02 | 0.0 | 0.04 | 12.31 | 0.00 | 2.003 | 1.99 | 0.69 | 2.2 | 97.8 | 0.0 | -0.82 | 0.60 | 0.81 | 2.35 | 3.9 | 0.002 | 0.55 | 0.0 | 0.04 | 15.41 | 0.00 | 1.999 | 5.52 | 0.30 | 2.5 | 97.5 | 0.0 | 1.05 | 0.59 | 0.61 | 0.81 | 1.47 | 9673 | 1173 | 3 | 0 | 32 | 0 | 0 | logfile |
✔ | 6WSL | 21893 | 2023-02-24 | 2020-05-01 | 3.1 | 3.39 | — | 3.9 | 0.007 | 0.82 | 0.0 | 0.05 | 15.24 | 0.01 | 2.264 | 6.73 | 8.98 | 6.8 | 93.2 | 0.0 | -5.33 | 0.54 | 0.84 | 2.29 | 3.9 | 0.004 | 0.70 | 0.0 | 0.04 | 16.39 | 0.00 | 2.160 | 13.90 | 0.20 | 6.6 | 93.4 | 0.0 | -2.07 | 0.80 | 0.55 | 0.86 | 2.13 | 18204 | 2278 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 7FDH | 31543 | 2023-02-17 | 2021-07-16 | 3.72 | 3.93 | — | 3.8 | 0.004 | 0.72 | 0.0 | 0.05 | 14.51 | 0.00 | 2.145 | 13.12 | 0.29 | 3.8 | 96.2 | 0.0 | -2.91 | 0.72 | 0.81 | 2.27 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 16.14 | 0.00 | 2.200 | 13.04 | 0.58 | 2.5 | 97.5 | 0.0 | 1.15 | 1.23 | 0.71 | 0.80 | 1.97 | 6488 | 791 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7TPF | 26053 | 2023-02-24 | 2022-01-25 | 3.4 | 3.74 | — | 3.4 | 0.013 | 1.75 | 3.0 | 0.09 | 12.67 | 0.01 | 2.518 | 0.04 | 0.72 | 6.1 | 93.5 | 0.3 | -0.86 | 0.84 | 0.86 | 3.82 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 13.28 | 0.00 | 2.189 | 4.23 | 0.09 | 4.3 | 95.5 | 0.1 | 0.39 | 0.45 | 0.85 | 0.87 | 3.13 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7XW5 | 33491 | 2023-02-20 | 2022-05-26 | 2.96 | 3.19 | 2.99 | 3.2 | 0.014 | 1.89 | 8.0 | 0.10 | 13.14 | 0.02 | 2.119 | 2.60 | 0.53 | 4.6 | 95.4 | 0.0 | -0.98 | 0.61 | 0.73 | 3.28 | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 15.26 | 0.00 | 2.234 | 7.97 | 3.40 | 2.9 | 97.1 | 0.0 | 0.56 | 0.78 | 0.68 | 0.81 | 2.33 | 12618 | 1522 | 10 | 0 | 27 | 0 | 0 | logfile |