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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RZU | 24778 | 2022-12-11 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.005 | 0.52 | 0.0 | 0.03 | 15.91 | 0.00 | 2.234 | 8.11 | 1.75 | 0.0 | 100.0 | 0.0 | 4.99 | 0.49 | 0.80 | 0.81 | 1.62 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZV | 24779 | 2022-12-11 | 2021-08-27 | 2.11 | 2.24 | — | 2.0 | 0.005 | 0.35 | 0.0 | 0.03 | 14.68 | 0.00 | 2.348 | 5.44 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.79 | 0.80 | 2.21 | 2.0 | 0.004 | 0.36 | 0.0 | 0.03 | 15.90 | 0.00 | 2.235 | 5.24 | 0.34 | 0.0 | 100.0 | 0.0 | 5.91 | 0.88 | 0.83 | 0.83 | 1.88 | 2562 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LHV | 0900 | 2022-12-13 | 2019-12-10 | 4.59 | 4.86 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 5.37 | 0.00 | 1.654 | 9.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.59 | — | 4.4 | 0.009 | 1.36 | 0.0 | 0.05 | 6.54 | 0.00 | 2.055 | 51.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.58 | 0.84 | 0.81 | — | 8456 | 0 | 3 | 0 | 1707 | 0 | 0 | logfile |
✔ | 6WL7 | 21816 | 2022-12-18 | 2020-04-18 | 3.8 | 4.18 | — | 3.9 | 0.006 | 0.58 | 0.0 | 0.04 | 14.93 | 0.00 | 2.204 | 8.50 | 0.00 | 1.2 | 98.8 | 0.0 | 3.28 | 0.79 | 0.87 | 2.36 | 3.9 | 0.005 | 0.98 | 0.0 | 0.04 | 17.43 | 0.00 | 2.093 | 15.88 | 2.00 | 0.0 | 100.0 | 0.0 | 4.88 | 1.01 | 0.79 | 0.86 | 1.96 | 34350 | 4350 | 150 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WKX | 21812 | 2022-12-13 | 2020-04-17 | 4.2 | 4.31 | — | 4.2 | 0.006 | 0.59 | 0.0 | 0.04 | 15.11 | 0.00 | 2.298 | 2.52 | 0.00 | 0.0 | 100.0 | 0.0 | -3.67 | 0.77 | 0.90 | — | 4.2 | 0.004 | 0.66 | 0.0 | 0.04 | 16.54 | 0.00 | 2.187 | 8.89 | 0.00 | 0.0 | 100.0 | 0.0 | 4.22 | 1.00 | 0.77 | 0.89 | — | 12915 | 1575 | 105 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X5i | 22051 | 2022-12-11 | 2020-05-26 | 4.3 | 4.27 | — | 4.0 | 0.060 | 2.85 | 210.0 | 0.16 | 31.34 | 0.00 | 2.206 | 29.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.70 | — | 4.0 | 0.010 | 1.52 | 210.0 | 0.14 | 25.91 | 0.00 | 1.249 | 62.11 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.32 | 0.68 | 0.73 | — | 4480 | 70 | 70 | 0 | 280 | 0 | 0 | logfile |
✔ | 7oHF | 12901 | 2022-12-18 | 2021-05-10 | 3.0 | 3.29 | 3.12 | 3.4 | 0.008 | 0.89 | 0.0 | 0.05 | 9.77 | 0.01 | 2.144 | 2.67 | 0.00 | 0.6 | 99.4 | 0.0 | -7.39 | 0.64 | 0.80 | 4.20 | 3.4 | 0.002 | 0.60 | 0.0 | 0.04 | 15.45 | 0.00 | 2.127 | 8.32 | 0.12 | 0.0 | 100.0 | 0.0 | -0.18 | 1.61 | 0.62 | 0.81 | 2.79 | 33576 | 4056 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LHW | 0901 | 2022-12-13 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.6 | 0.008 | 1.29 | 0.0 | 0.04 | 6.56 | 0.00 | 2.037 | 44.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.20 | 0.83 | 0.64 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 7QV6 | 14168 | 2022-12-11 | 2022-01-19 | 3.5 | 3.33 | 3.32 | 3.5 | 0.011 | 0.59 | 0.0 | 0.05 | 11.56 | 0.00 | 2.480 | 1.86 | 0.00 | 1.1 | 98.9 | 0.0 | -1.85 | 0.39 | 0.86 | 5.72 | 3.5 | 0.002 | 0.40 | 0.0 | 0.06 | 11.87 | 0.00 | 2.374 | 1.45 | 0.00 | 0.0 | 100.0 | 0.0 | 0.66 | 0.46 | 0.40 | 0.86 | 5.96 | 4842 | 306 | 18 | 0 | 0 | 0 | 2556 | logfile |
✔ | 7PBW | 13307 | 2022-12-12 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.009 | 0.99 | 0.0 | 0.05 | 12.27 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.004 | 0.78 | 0.0 | 0.04 | 14.65 | 0.01 | 2.138 | 7.63 | 0.15 | 0.0 | 100.0 | 0.0 | 4.36 | 0.28 | 0.77 | 0.90 | 7.37 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |
✔ | 7R6M | 24282 | 2022-12-11 | 2021-06-22 | 3.68 | 3.27 | — | 3.4 | 0.006 | 0.94 | 0.0 | 0.04 | 17.86 | 0.01 | 2.005 | 4.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.53 | 0.72 | — | 3.4 | 0.007 | 0.85 | 0.0 | 0.04 | 18.31 | 0.01 | 1.758 | 16.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.53 | 0.72 | — | 7755 | 0 | 3 | 362 | 13 | 0 | 0 | logfile |
✔ | 7EZ0 | 31385 | 2022-12-12 | 2021-06-01 | 3.14 | 3.26 | — | 3.2 | 0.003 | 0.56 | 0.0 | 0.03 | 14.43 | 0.00 | 1.804 | 2.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.74 | 0.79 | — | 3.2 | 0.006 | 0.69 | 0.0 | 0.04 | 15.71 | 0.00 | 1.877 | 8.66 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.91 | 0.77 | 0.86 | — | 8306 | 0 | 1 | 387 | 27 | 0 | 0 | logfile |
✔ | 6WL1 | 21815 | 2022-12-13 | 2020-04-17 | 4.0 | 4.02 | — | 4.0 | 0.007 | 0.81 | 0.0 | 0.05 | 7.85 | 0.00 | 2.413 | 3.17 | 0.00 | 0.0 | 100.0 | 0.0 | -1.08 | 0.71 | 0.85 | — | 4.0 | 0.004 | 0.51 | 0.0 | 0.04 | 16.18 | 0.00 | 2.242 | 6.18 | 1.33 | 0.0 | 100.0 | 0.0 | 6.14 | 0.73 | 0.72 | 0.86 | — | 14612 | 1872 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZS | 24776 | 2022-12-11 | 2021-08-27 | 2.52 | 2.32 | — | 2.1 | 0.005 | 0.46 | 0.0 | 0.03 | 14.73 | 0.00 | 2.273 | 3.04 | 0.00 | 1.0 | 99.0 | 0.0 | 1.98 | 0.77 | 0.79 | 1.82 | 2.0 | 0.003 | 0.43 | 0.0 | 0.04 | 15.95 | 0.00 | 2.318 | 4.66 | 0.71 | 0.0 | 100.0 | 0.0 | 5.82 | 1.18 | 0.79 | 0.82 | 1.27 | 2445 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2022-12-11 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.003 | 0.35 | 0.0 | 0.03 | 15.28 | 0.00 | 2.325 | 4.84 | 0.35 | 0.0 | 100.0 | 0.0 | 6.56 | 0.32 | 0.81 | 0.83 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X64 | 22069 | 2022-12-13 | 2020-05-27 | 3.7 | 4.01 | — | 3.7 | 0.008 | 1.34 | 0.0 | 0.05 | 9.32 | 0.01 | 2.584 | 0.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.68 | 0.84 | — | 3.7 | 0.009 | 1.23 | 0.0 | 0.05 | 5.42 | 0.00 | 2.111 | 10.24 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.35 | 0.69 | 0.86 | — | 15840 | 0 | 36 | 0 | 3168 | 0 | 0 | logfile |
✔ | 7EZ2 | 31386 | 2022-12-12 | 2021-06-01 | 3.05 | 2.80 | — | 3.0 | 0.005 | 0.56 | 0.0 | 0.03 | 13.90 | 0.00 | 1.809 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.69 | 0.81 | — | 3.0 | 0.007 | 0.84 | 0.0 | 0.05 | 15.80 | 0.01 | 1.754 | 7.22 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.04 | 0.73 | 0.89 | — | 8698 | 0 | 3 | 406 | 31 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2022-12-11 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.54 | 0.00 | 2.332 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.21 | 0.24 | 0.80 | 0.83 | 3.03 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2022-12-11 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.61 | 0.0 | 0.07 | 15.67 | 0.02 | 1.977 | 4.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.96 | 0.0 | 0.05 | 22.24 | 0.01 | 1.829 | 50.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 6UES | 20755 | 2022-12-11 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.87 | 0.0 | 0.04 | 21.10 | 0.01 | 1.792 | 36.17 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |