Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7L2o	23135	2022-07-04	2020-12-17	3.64	3.93	3.68	3.9	0.010	0.89	0.0	0.05	12.84	0.00	1.989	3.63	1.87	5.0	95.0	0.0	-0.84	0.54	0.78	2.34	3.9	0.004	0.72	0.0	0.04	16.65	0.01	2.145	11.26	0.76	7.3	92.7	0.0	0.26	0.90	0.54	0.78	1.48	15800	1920	8	0	4	0	0	logfile
✔	7RLG	24529	2022-07-06	2021-07-23	3.7	3.79	—	3.5	0.003	0.73	0.0	0.05	13.67	0.00	2.261	10.57	0.16	4.6	95.4	0.0	-1.35	0.85	0.79	1.10	3.5	0.003	0.64	0.0	0.04	14.90	0.00	2.161	11.02	0.05	3.6	96.4	0.0	-0.30	1.45	0.89	0.85	1.17	34860	4410	12	0	12	0	0	logfile
✔	7F56	31459	2022-07-05	2021-06-21	4.1	4.62	—	3.9	0.008	1.11	3.0	0.10	13.38	0.01	1.831	27.70	0.50	10.6	89.4	0.0	-2.66	0.78	0.78	—	3.9	0.005	0.73	0.0	0.04	13.51	0.00	2.094	18.41	0.00	7.2	92.8	0.0	-0.53	0.63	0.79	0.83	—	27834	3468	13	0	28	0	0	logfile
✔	7LB6	23264	2022-07-08	2021-01-07	3.16	3.80	—	3.5	0.004	0.56	0.0	0.04	13.24	0.00	2.112	10.47	0.00	2.3	97.7	0.0	-1.06	0.90	0.87	2.63	3.5	0.013	0.80	0.0	0.05	14.81	0.00	2.067	13.05	3.95	5.7	94.3	0.0	0.45	0.99	0.91	0.90	2.80	47760	6276	24	0	0	0	0	logfile
✔	7M1X	23626	2022-07-03	2021-03-15	3.7	4.26	—	4.1	0.007	0.78	0.0	0.04	29.10	0.01	2.244	6.56	2.27	5.5	94.4	0.1	-1.56	0.83	0.84	1.52	4.1	0.006	0.72	0.0	0.04	29.27	0.00	2.056	17.85	0.65	5.6	94.4	0.0	0.88	1.26	0.84	0.85	1.58	11475	746	10	272	0	0	0	logfile
✔	7MZ5	24083	2022-07-04	2021-05-24	2.76	2.90	2.75	3.0	0.005	0.72	4.0	0.05	10.94	0.00	2.138	1.25	1.03	4.1	95.5	0.4	1.27	0.56	0.80	2.22	3.0	0.004	0.66	0.0	0.04	15.88	0.00	2.216	10.38	1.48	6.5	93.5	0.0	1.10	0.72	0.56	0.82	1.38	14291	1724	8	0	7	0	0	logfile
✔	7F59	31462	2022-07-06	2021-06-21	4.2	4.64	—	4.3	0.008	1.08	4.0	0.11	13.02	0.01	1.239	29.34	0.19	11.5	88.4	0.1	-2.55	0.78	0.80	—	4.3	0.004	0.67	0.0	0.04	13.41	0.00	2.072	17.02	0.00	7.3	92.7	0.0	-0.99	0.50	0.78	0.79	—	28972	3628	13	0	20	0	0	logfile
✔	7K9J	22750	2022-07-06	2020-09-29	3.0	3.59	3.08	3.5	0.004	0.74	1.0	0.05	14.42	0.01	2.084	8.86	0.57	3.8	96.2	0.0	-0.88	0.73	0.78	2.65	3.5	0.004	0.65	0.0	0.05	16.07	0.01	2.069	8.72	1.14	4.5	95.5	0.0	-0.48	0.44	0.73	0.80	2.31	29766	3627	54	0	111	0	0	logfile
✔	7F57	31460	2022-07-05	2021-06-21	3.8	4.25	—	4.0	0.007	0.98	3.0	0.10	13.26	0.02	2.061	17.34	0.60	8.4	91.6	0.0	-2.23	0.74	0.82	1.65	4.0	0.003	0.72	0.0	0.04	15.22	0.00	2.158	12.74	0.27	5.6	94.4	0.0	-0.84	1.43	0.74	0.82	1.41	27863	3468	15	0	29	0	0	logfile
✔	7Fii	31598	2022-07-03	2021-07-31	4.3	4.37	—	4.1	0.002	0.36	0.0	0.04	8.97	0.00	2.073	1.66	0.00	0.9	99.1	0.0	3.08	0.64	0.69	—	4.1	0.003	0.57	0.0	0.04	9.50	0.00	2.272	5.60	0.00	3.6	96.4	0.0	1.07	0.67	0.66	0.75	—	8765	1522	6	0	0	0	0	logfile
✔	7F5B	31464	2022-07-04	2021-06-21	3.9	4.19	—	4.1	0.004	0.80	1.0	0.05	14.64	0.00	2.110	15.02	0.18	8.7	91.2	0.1	-1.83	0.69	0.79	1.36	4.1	0.004	0.73	0.0	0.04	16.72	0.00	2.148	13.55	0.12	9.0	91.0	0.0	-1.41	0.45	0.69	0.80	0.91	15328	1921	11	0	14	0	0	logfile
✔	7S65	24850	2022-07-05	2021-09-13	3.2	3.04	3.23	3.3	0.014	1.46	0.0	0.07	11.66	0.01	1.385	8.57	0.26	2.0	98.0	0.0	0.19	0.64	0.74	3.55	3.2	0.007	0.68	0.0	0.04	15.87	0.01	1.819	9.55	0.17	2.4	97.6	0.0	0.47	0.69	0.65	0.79	3.23	22049	2760	12	0	24	0	0	logfile
✔	7RLA	24523	2022-07-06	2021-07-23	3.1	3.89	—	3.4	0.003	0.78	0.0	0.05	13.59	0.00	2.035	10.00	0.03	7.5	92.5	0.0	-1.72	0.79	0.79	1.20	3.4	0.004	0.64	0.0	0.04	15.16	0.00	1.866	10.12	0.16	6.0	94.0	0.0	-0.14	1.69	0.81	0.84	1.37	34944	4422	12	0	24	0	0	logfile
✔	7BCT	12143	2022-07-04	2020-12-21	3.37	3.33	3.31	3.4	0.009	1.15	0.0	0.15	13.35	0.01	2.299	4.43	0.00	5.7	94.3	0.0	-0.74	0.51	0.67	2.81	3.4	0.004	0.79	0.0	0.17	14.90	0.00	2.003	10.40	0.58	5.9	94.1	0.0	1.14	0.79	0.56	0.73	2.59	20091	1326	3	0	0	0	10299	logfile
✔	7RLC	24525	2022-07-06	2021-07-23	3.2	3.75	—	3.2	0.003	0.65	0.0	0.04	9.50	0.00	0.891	7.51	0.00	5.3	94.4	0.3	-1.71	0.83	0.79	1.78	3.2	0.003	0.57	0.0	0.04	11.42	0.00	1.898	5.84	0.16	5.0	95.0	0.0	-0.15	1.27	0.88	0.87	2.34	34980	4422	12	0	24	0	0	logfile
✔	7S66	24851	2022-07-05	2021-09-13	2.8	3.06	2.88	3.1	0.013	1.34	0.0	0.06	10.54	0.01	1.770	2.67	0.00	1.4	98.6	0.0	0.50	0.75	0.83	3.82	3.0	0.003	0.54	0.0	0.04	16.32	0.00	1.869	5.33	2.04	1.6	98.4	0.0	0.85	1.36	0.73	0.85	3.48	23242	2910	12	0	24	0	0	logfile
✔	7L2M	23133	2022-07-04	2020-12-17	3.84	4.16	3.86	4.1	0.007	0.78	0.0	0.04	11.75	0.00	2.196	2.25	0.75	5.3	94.7	0.0	0.06	0.57	0.80	1.48	4.1	0.003	0.65	0.0	0.04	15.91	0.01	2.187	8.97	0.23	6.2	93.8	0.0	0.40	0.82	0.56	0.81	0.94	15981	1934	10	0	7	0	0	logfile
✔	7RL9	24522	2022-07-07	2021-07-23	3.3	3.87	—	3.6	0.003	0.73	0.0	0.04	11.05	0.00	2.210	9.56	0.00	8.1	91.6	0.3	-1.82	0.82	0.81	1.73	3.6	0.003	0.61	0.0	0.04	11.92	0.00	2.206	7.78	0.11	7.4	92.6	0.0	-0.62	1.20	0.83	0.84	1.91	35220	4464	12	0	12	0	0	logfile
✔	7LXT	23574	2022-07-08	2021-03-05	3.4	3.70	3.40	3.7	0.009	0.85	0.0	0.05	14.67	0.00	1.972	18.16	0.79	10.7	89.3	0.0	-2.90	0.75	0.82	2.36	3.7	0.008	0.86	2.0	0.04	16.40	0.00	1.208	14.81	0.07	7.7	92.3	0.0	-1.68	0.39	0.76	0.84	1.70	50536	6318	34	0	6	0	0	logfile
✔	7LB5	23263	2022-07-05	2021-01-07	3.16	4.00	—	3.7	0.003	0.52	0.0	0.04	14.28	0.00	2.323	7.12	0.93	1.9	98.1	0.0	-1.95	0.87	0.84	2.57	3.7	0.003	0.55	0.0	0.04	15.55	0.00	2.256	5.62	0.04	2.4	97.6	0.0	2.36	0.43	0.83	0.86	2.59	23616	3120	12	0	0	0	0	logfile

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