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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NYW | 12656 | 2022-04-09 | 2021-03-23 | 3.1 | 3.76 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 18.04 | 0.00 | 1.891 | 6.07 | 0.00 | 3.7 | 96.3 | 0.0 | 1.43 | 0.83 | 0.79 | 1.86 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 18.54 | 0.00 | 1.855 | 6.50 | 0.08 | 3.6 | 96.4 | 0.0 | 2.00 | 0.47 | 0.84 | 0.83 | 1.82 | 48568 | 2795 | 18 | 104 | 6 | 0 | 23780 | logfile |
✔ | 7oP5 | 13013 | 2022-04-04 | 2021-05-29 | 3.7 | 4.09 | — | 4.0 | 0.004 | 0.72 | 0.0 | 0.05 | 13.58 | 0.00 | 1.940 | 8.21 | 0.00 | 6.2 | 93.8 | 0.0 | -1.69 | 0.68 | 0.78 | 1.67 | 4.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.71 | 0.01 | 1.900 | 7.57 | 0.21 | 4.6 | 95.4 | 0.0 | -0.44 | 0.42 | 0.67 | 0.77 | 1.07 | 8554 | 1076 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7F4G | 31450 | 2022-04-07 | 2021-06-18 | 2.78 | 3.30 | — | 3.2 | 0.017 | 1.11 | 4.0 | 0.07 | 14.67 | 0.01 | 1.898 | 14.93 | 1.43 | 8.7 | 91.0 | 0.3 | -3.97 | 0.69 | 0.81 | 3.30 | 3.2 | 0.003 | 0.68 | 0.0 | 0.05 | 16.88 | 0.00 | 2.124 | 11.59 | 2.69 | 5.6 | 94.4 | 0.0 | -0.37 | 1.19 | 0.59 | 0.73 | 2.37 | 27957 | 3491 | 17 | 0 | 5 | 0 | 0 | logfile |
✔ | 7LQi | 23487 | 2022-04-04 | 2021-02-13 | 3.5 | 3.92 | — | 3.9 | 0.016 | 1.40 | 0.0 | 0.03 | 20.42 | 0.00 | 2.242 | 22.86 | 5.00 | 0.0 | 100.0 | 0.0 | -3.42 | 0.62 | 0.78 | 4.80 | 3.9 | 0.051 | 2.84 | 5.0 | 0.14 | 22.95 | 0.01 | 1.918 | 120.83 | 3.83 | 46.2 | 53.8 | 0.0 | -7.03 | 1.54 | 0.65 | 0.83 | 2.47 | 8400 | 800 | 100 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AFN | 11771 | 2022-04-06 | 2020-09-19 | 3.86 | 5.27 | 3.89 | 3.0 | 0.009 | 1.02 | 3.0 | 0.07 | 17.92 | 0.02 | 1.755 | 23.03 | 0.00 | 6.9 | 93.1 | 0.0 | -1.93 | 0.90 | 0.83 | 0.72 | 3.0 | 0.004 | 0.75 | 0.0 | 0.04 | 17.09 | 0.01 | 1.889 | 24.66 | 0.65 | 4.1 | 95.9 | 0.0 | 0.13 | 1.72 | 0.91 | 0.88 | 0.80 | 18520 | 1108 | 11 | 456 | 12 | 0 | 0 | logfile |
✔ | 7o7F | 12746 | 2022-04-05 | 2021-04-13 | 3.15 | 3.42 | 3.19 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 14.02 | 0.00 | 1.932 | 7.93 | 0.16 | 2.5 | 97.5 | 0.0 | 0.48 | 0.70 | 0.77 | 2.29 | 3.4 | 0.004 | 0.66 | 0.0 | 0.04 | 15.82 | 0.01 | 2.096 | 9.46 | 0.24 | 2.0 | 98.0 | 0.0 | 0.49 | 0.52 | 0.69 | 0.75 | 1.99 | 11170 | 1420 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B9F | 12103 | 2022-04-05 | 2020-12-14 | 3.0 | 3.81 | — | 3.5 | 0.008 | 1.01 | 1.0 | 0.06 | 12.03 | 0.01 | 2.247 | 4.11 | 0.00 | 3.4 | 96.6 | 0.0 | -0.11 | 0.61 | 0.82 | 2.32 | 3.5 | 0.006 | 0.87 | 0.0 | 0.05 | 15.28 | 0.01 | 2.163 | 12.96 | 2.46 | 4.2 | 95.8 | 0.0 | 1.17 | 0.59 | 0.62 | 0.84 | 1.68 | 11270 | 1475 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BoF | 12241 | 2022-04-08 | 2021-01-25 | 2.92 | 3.17 | 2.92 | 2.9 | 0.008 | 0.65 | 0.0 | 0.04 | 14.44 | 0.01 | 1.894 | 9.72 | 0.00 | 3.6 | 96.4 | 0.0 | -2.50 | 0.84 | 0.87 | 3.08 | 2.9 | 0.008 | 0.70 | 0.0 | 0.04 | 15.19 | 0.01 | 1.849 | 11.22 | 2.76 | 4.0 | 96.0 | 0.0 | -0.29 | 1.12 | 0.87 | 0.92 | 2.82 | 32814 | 1238 | 13 | 1070 | 129 | 0 | 0 | logfile |
✔ | 7BoD | 12239 | 2022-04-08 | 2021-01-25 | 2.88 | 3.14 | 2.90 | 2.9 | 0.007 | 0.73 | 0.0 | 0.04 | 14.55 | 0.02 | 1.913 | 6.23 | 0.47 | 2.1 | 97.9 | 0.0 | -1.72 | 0.82 | 0.87 | 2.85 | 2.9 | 0.006 | 0.65 | 0.0 | 0.04 | 15.14 | 0.01 | 1.888 | 9.97 | 3.12 | 2.7 | 97.3 | 0.0 | 0.26 | 0.46 | 0.85 | 0.92 | 3.03 | 33389 | 1289 | 14 | 1078 | 101 | 0 | 0 | logfile |
✔ | 7BoG | 12242 | 2022-04-08 | 2021-01-25 | 2.75 | 3.15 | 2.81 | 2.9 | 0.007 | 0.61 | 0.0 | 0.04 | 13.93 | 0.02 | 1.937 | 5.87 | 0.00 | 3.0 | 97.0 | 0.0 | -1.93 | 0.87 | 0.91 | 3.29 | 2.9 | 0.009 | 0.72 | 0.0 | 0.04 | 14.71 | 0.01 | 1.870 | 9.81 | 2.46 | 3.5 | 96.5 | 0.0 | 0.01 | 1.12 | 0.87 | 0.92 | 2.80 | 33589 | 1336 | 16 | 1071 | 105 | 0 | 0 | logfile |
✔ | 7AFK | 11768 | 2022-04-06 | 2020-09-19 | 4.9 | 5.45 | 4.73 | 3.0 | 0.008 | 0.88 | 1.0 | 0.05 | 18.40 | 0.02 | 1.519 | 42.19 | 0.00 | 8.4 | 91.6 | 0.0 | -2.88 | 0.87 | 0.80 | — | 2.7 | 0.004 | 0.73 | 0.0 | 0.04 | 17.62 | 0.01 | 1.846 | 36.58 | 0.00 | 5.7 | 94.3 | 0.0 | -1.09 | 0.77 | 0.88 | 0.85 | — | 18521 | 1108 | 11 | 456 | 13 | 0 | 0 | logfile |
✔ | 7NKY | 12450 | 2022-04-10 | 2021-02-19 | 3.2 | 3.33 | — | 3.3 | 0.006 | 0.97 | 0.0 | 0.05 | 20.35 | 0.01 | 1.982 | 6.56 | 0.02 | 4.9 | 95.1 | 0.0 | -0.29 | 0.81 | 0.73 | 1.11 | 3.3 | 0.006 | 0.75 | 1.0 | 0.04 | 21.10 | 0.00 | 2.030 | 14.54 | 0.40 | 4.1 | 95.9 | 0.0 | 0.42 | 0.57 | 0.83 | 0.77 | 1.42 | 51842 | 5734 | 34 | 302 | 10 | 0 | 0 | logfile |
✔ | 7MTR | 23995 | 2022-04-05 | 2021-05-13 | 3.3 | 2.40 | — | 2.1 | 0.007 | 0.97 | 1.0 | 0.05 | 14.03 | 0.01 | 2.236 | 7.66 | 1.03 | 3.9 | 96.1 | 0.0 | -0.20 | 0.78 | 0.74 | 2.62 | 2.1 | 0.013 | 1.22 | 1.0 | 0.04 | 15.21 | 0.01 | 2.155 | 5.25 | 0.10 | 2.6 | 97.4 | 0.0 | 0.33 | 0.47 | 0.79 | 0.79 | 2.31 | 10967 | 1524 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7MTQ | 23994 | 2022-04-05 | 2021-05-13 | 3.65 | 2.61 | — | 2.2 | 0.011 | 0.84 | 1.0 | 0.05 | 13.67 | 0.01 | 2.205 | 8.45 | 0.56 | 3.2 | 96.8 | 0.0 | 0.26 | 0.70 | 0.73 | 2.03 | 2.2 | 0.004 | 0.63 | 0.0 | 0.04 | 14.34 | 0.01 | 2.159 | 7.68 | 0.22 | 2.9 | 97.1 | 0.0 | 0.05 | 0.42 | 0.72 | 0.74 | 1.82 | 10388 | 1486 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7AFL | 11769 | 2022-04-08 | 2020-09-19 | 4.2 | 5.13 | 4.56 | 3.0 | 0.010 | 1.08 | 6.0 | 0.06 | 17.44 | 0.01 | 1.852 | 43.68 | 0.00 | 6.0 | 94.0 | 0.0 | -1.84 | 0.89 | 0.87 | — | 2.8 | 0.006 | 0.72 | 0.0 | 0.04 | 16.52 | 0.01 | 1.822 | 40.79 | 0.00 | 6.1 | 93.9 | 0.0 | -1.34 | 0.73 | 0.89 | 0.88 | — | 34322 | 1487 | 15 | 1054 | 25 | 0 | 0 | logfile |
✔ | 7B9S | 12105 | 2022-04-06 | 2020-12-14 | 3.4 | 4.02 | — | 3.6 | 0.006 | 1.03 | 6.0 | 0.06 | 12.82 | 0.01 | 2.271 | 2.93 | 0.37 | 3.8 | 96.2 | 0.0 | -0.79 | 0.77 | 0.79 | 1.17 | 3.6 | 0.008 | 0.89 | 1.0 | 0.05 | 14.41 | 0.00 | 1.876 | 13.77 | 0.15 | 3.9 | 96.1 | 0.0 | 1.07 | 0.61 | 0.78 | 0.81 | 0.78 | 72030 | 9426 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N1X | 24126 | 2022-04-07 | 2021-05-28 | 4.0 | 2.34 | — | 1.8 | 0.013 | 1.88 | 13.0 | 0.14 | 14.66 | 0.01 | 1.484 | 9.88 | 1.97 | 8.1 | 91.3 | 0.6 | -2.39 | 0.80 | 0.69 | — | 1.8 | 0.008 | 0.89 | 1.0 | 0.05 | 16.35 | 0.01 | 2.088 | 14.04 | 0.60 | 4.9 | 95.1 | 0.0 | -1.02 | 1.09 | 0.80 | 0.68 | — | 26810 | 3257 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7N1U | 24123 | 2022-04-07 | 2021-05-28 | 3.14 | 2.62 | — | 1.9 | 0.013 | 1.75 | 7.0 | 0.13 | 14.19 | 0.01 | 2.003 | 6.59 | 1.56 | 6.1 | 93.7 | 0.3 | -1.65 | 0.83 | 0.80 | 3.13 | 1.9 | 0.004 | 0.76 | 0.0 | 0.05 | 15.84 | 0.01 | 2.016 | 11.55 | 0.25 | 4.0 | 96.0 | 0.0 | -0.09 | 0.66 | 0.84 | 0.83 | 2.29 | 26619 | 3225 | 39 | 0 | 99 | 0 | 0 | logfile |
✔ | 7NAS | 12246 | 2022-04-08 | 2021-01-25 | 3.31 | 4.38 | 7.71 | 2.7 | 0.009 | 0.80 | 3.0 | 0.05 | 15.55 | 0.01 | 1.629 | 25.97 | 0.00 | 8.1 | 91.9 | 0.0 | -3.73 | 0.90 | 0.90 | 1.47 | 2.7 | 0.008 | 0.80 | 0.0 | 0.04 | 16.02 | 0.01 | 1.729 | 30.72 | 0.75 | 6.2 | 93.8 | 0.0 | -1.33 | 1.21 | 0.90 | 0.91 | 1.44 | 32390 | 1454 | 15 | 974 | 43 | 0 | 0 | logfile |
✔ | 7DDE | 30652 | 2022-04-09 | 2020-10-28 | 2.26 | 3.31 | — | 3.0 | 0.009 | 1.14 | 10.0 | 0.07 | 14.34 | 0.01 | 2.042 | 8.45 | 1.16 | 5.0 | 94.9 | 0.0 | -2.84 | 0.71 | 0.85 | 3.66 | 3.0 | 0.003 | 0.65 | 0.0 | 0.05 | 16.03 | 0.00 | 1.969 | 13.61 | 1.01 | 6.2 | 93.8 | 0.0 | -0.22 | 1.17 | 0.69 | 0.85 | 3.23 | 51171 | 6300 | 36 | 0 | 48 | 1911 | 0 | logfile |