Table showing results for December 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6R81	4749	2021-12-01	2019-03-30	3.9	4.63	—	4.4	0.011	1.50	6.0	0.07	16.43	0.01	1.538	14.26	1.25	11.5	88.1	0.4	-5.27	0.71	0.82	1.01	4.4	0.004	0.88	0.0	0.04	17.91	0.00	2.027	15.31	0.83	9.8	90.2	0.0	-1.74	2.23	0.69	0.80	1.05	8861	1141	4	0	4	0	0	logfile
✔	6LN8	0927	2021-12-01	2019-12-28	3.1	3.26	3.33	3.3	0.003	0.56	0.0	0.04	12.81	0.00	2.051	6.74	0.00	3.0	97.0	0.0	-2.71	0.70	0.80	2.37	3.3	0.003	0.54	0.0	0.04	15.12	0.01	1.935	8.40	0.35	2.6	97.4	0.0	0.31	0.48	0.70	0.82	1.90	7739	1003	1	0	2	0	0	logfile
✔	6VRC	21367	2021-12-01	2020-02-07	3.2	3.32	—	3.3	0.010	1.27	2.0	0.08	15.90	0.01	2.170	11.58	3.70	7.7	92.3	0.0	-4.83	0.79	0.82	2.87	3.3	0.003	0.64	0.0	0.04	17.08	0.00	2.149	6.20	0.42	5.6	94.4	0.0	-0.67	0.89	0.80	0.85	2.09	9429	1007	2	51	0	0	0	logfile
✔	6LLY	0915	2021-12-01	2019-12-24	2.8	2.92	2.72	2.9	0.003	0.60	0.0	0.04	12.24	0.00	2.043	6.26	0.12	3.1	96.9	0.0	-4.03	0.66	0.79	2.62	2.9	0.002	0.57	0.0	0.04	15.50	0.00	1.263	8.69	1.75	2.9	97.1	0.0	-0.03	0.48	0.66	0.79	1.81	7774	1006	1	0	2	0	0	logfile
✔	6LN9	0928	2021-12-01	2019-12-28	3.4	3.61	3.06	3.6	0.003	0.54	0.0	0.04	12.32	0.00	2.075	7.76	0.00	4.1	95.9	0.0	-3.36	0.63	0.73	1.41	3.6	0.004	0.66	0.0	0.04	14.95	0.01	1.356	10.30	0.12	4.4	95.6	0.0	-0.40	0.51	0.64	0.76	1.13	7612	987	1	0	2	0	0	logfile
✔	6LN6	0925	2021-12-01	2019-12-28	2.9	3.03	2.87	3.0	0.005	0.61	0.0	0.04	11.78	0.00	2.035	6.53	0.00	2.0	98.0	0.0	-3.94	0.65	0.82	3.55	3.0	0.004	0.65	0.0	0.04	15.40	0.00	2.034	6.40	1.85	1.8	98.2	0.0	0.35	1.33	0.68	0.85	3.39	7836	1010	1	0	4	0	0	logfile
✔	6LN5	0924	2021-12-01	2019-12-28	2.8	2.93	2.78	2.9	0.005	0.60	0.0	0.04	12.21	0.00	2.027	5.32	0.12	2.0	98.0	0.0	-4.16	0.68	0.83	3.56	2.9	0.002	0.54	0.0	0.04	15.95	0.00	2.262	6.21	1.50	1.4	98.6	0.0	0.84	1.33	0.69	0.85	2.73	7840	1011	1	0	4	0	0	logfile
✔	6L48	0832	2021-12-01	2019-10-16	3.5	3.71	—	3.7	0.003	0.76	2.0	0.05	12.13	0.01	2.217	10.02	2.45	6.6	93.4	0.0	-3.38	0.64	0.74	1.87	3.7	0.018	1.66	0.0	0.05	16.12	0.01	2.202	11.88	0.46	5.9	94.1	0.0	-0.42	0.70	0.66	0.72	1.72	6528	794	4	0	2	0	0	logfile
✔	6LN7	0926	2021-12-01	2019-12-28	2.8	2.90	2.71	2.9	0.006	0.62	0.0	0.04	11.52	0.00	2.101	5.64	0.00	2.3	97.7	0.0	-3.93	0.70	0.85	3.69	2.9	0.008	0.98	0.0	0.04	16.55	0.00	2.104	7.22	1.39	2.4	97.6	0.0	0.35	0.44	0.72	0.87	3.03	7840	1011	1	0	4	0	0	logfile
✔	6SKM	10228	2021-12-02	2019-08-16	4.9	5.09	4.66	4.9	0.004	0.64	0.0	0.04	9.23	0.00	1.449	9.83	0.18	1.4	98.6	0.0	-1.03	0.68	0.74	—	4.9	0.004	0.81	0.0	0.05	12.83	0.01	2.119	21.20	0.18	3.1	96.9	0.0	0.18	2.76	0.70	0.80	—	10336	1320	6	0	0	0	0	logfile
✔	6W64	21552	2021-12-01	2020-03-16	3.9	4.06	—	4.0	0.003	0.58	0.0	0.04	13.75	0.00	2.196	9.67	1.29	7.0	92.9	0.1	0.30	0.74	0.70	0.86	4.0	0.004	0.75	0.0	0.04	18.16	0.01	2.143	18.48	0.39	8.6	91.4	0.0	-0.67	0.94	0.75	0.72	1.10	8505	928	3	56	0	0	0	logfile
✔	6SLQ	10239	2021-12-02	2019-08-20	4.4	4.54	4.34	4.5	0.012	0.81	0.0	0.04	9.23	0.01	1.359	11.86	0.18	1.1	98.9	0.0	-1.02	0.63	0.72	—	4.5	0.004	0.80	0.0	0.05	13.25	0.01	2.106	15.30	0.00	3.9	96.1	0.0	0.02	1.20	0.65	0.76	—	10336	1320	6	0	0	0	0	logfile
✔	7A91	11681	2021-12-01	2020-09-01	3.6	3.74	3.57	3.7	0.006	0.77	0.0	0.05	15.20	0.01	2.194	3.33	0.81	4.9	95.1	0.0	-2.81	0.75	0.82	2.55	3.7	0.004	0.66	0.0	0.04	16.49	0.01	2.199	6.36	0.27	3.1	96.9	0.0	-0.68	2.46	0.76	0.82	1.93	6915	839	5	0	10	0	0	logfile
✔	6VK3	21224	2021-12-01	2020-01-18	3.7	3.81	—	3.8	0.006	0.93	0.0	0.06	14.84	0.01	2.013	12.39	0.00	5.1	94.8	0.1	-2.61	0.68	0.80	1.94	3.8	0.003	0.60	0.0	0.04	16.87	0.00	2.204	8.22	0.36	5.1	94.9	0.0	0.32	1.62	0.68	0.79	1.43	7784	954	2	0	7	0	0	logfile
✔	6VJY	21220	2021-12-01	2020-01-18	4.3	4.47	—	4.3	0.003	0.64	0.0	0.04	14.40	0.00	2.223	12.37	0.13	4.1	95.9	0.0	-1.62	0.70	0.81	—	4.3	0.003	0.70	0.0	0.04	14.52	0.00	2.157	10.36	0.13	3.7	96.3	0.0	1.77	0.85	0.70	0.80	—	7266	883	2	0	0	0	0	logfile
✔	6WUJ	21914	2021-12-01	2020-05-04	3.7	3.85	—	3.8	0.007	0.93	0.0	0.05	13.20	0.01	2.059	10.03	0.15	16.1	83.8	0.1	-5.66	0.71	0.82	3.23	3.8	0.003	0.70	0.0	0.04	15.01	0.01	2.137	8.68	0.29	9.4	90.6	0.0	-1.86	0.57	0.71	0.81	2.86	6699	884	3	0	0	0	0	logfile
✔	6UWL	20923	2021-12-01	2019-11-05	3.62	3.73	—	3.7	0.008	1.15	0.0	0.06	16.05	0.01	2.303	6.24	0.00	7.6	92.2	0.3	-4.71	0.67	0.82	1.71	3.7	0.003	0.77	0.0	0.04	15.98	0.00	2.239	12.97	0.00	6.3	93.7	0.0	-0.01	0.55	0.66	0.81	1.50	3029	402	1	0	1	0	0	logfile
✔	6K42	9912	2021-12-01	2019-05-23	4.1	4.04	—	4.1	0.005	0.86	0.0	0.05	9.20	0.01	2.288	4.27	0.31	5.4	94.6	0.0	-4.37	0.60	0.63	—	4.0	0.004	0.77	0.0	0.04	13.48	0.00	2.143	14.56	0.21	7.7	92.3	0.0	-1.60	2.65	0.67	0.74	—	8816	1116	6	0	1	0	0	logfile
✔	6UWF	20922	2021-12-01	2019-11-05	3.08	3.26	—	3.3	0.008	1.07	0.0	0.05	16.40	0.01	2.294	2.14	0.00	3.1	96.9	0.0	-3.86	0.70	0.85	2.48	3.3	0.002	0.56	0.0	0.04	15.13	0.00	2.263	7.03	0.31	3.1	96.9	0.0	1.21	1.11	0.67	0.85	2.41	3178	417	1	0	2	0	0	logfile
✔	6VQT	21356	2021-12-01	2020-02-05	3.03	4.54	3.09	4.1	0.009	1.15	0.0	0.06	16.32	0.01	1.733	10.32	4.94	2.7	97.3	0.0	1.39	0.78	0.80	1.43	4.1	0.003	0.72	0.0	0.04	16.44	0.00	0.999	9.66	0.43	2.9	97.1	0.0	2.46	1.06	0.77	0.84	1.36	9144	1168	4	0	6	0	0	logfile

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