The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y5T | 33624 | 2023-04-21 | 2022-06-17 | 2.9 | 2.28 | 2.95 | 3.0 | 0.007 | 1.02 | 0.0 | 0.19 | 10.45 | 0.01 | 2.265 | 3.95 | 0.18 | 5.1 | 94.9 | 0.0 | -3.37 | 0.64 | 0.84 | 4.18 | 3.0 | 0.003 | 0.72 | 0.0 | 0.06 | 15.01 | 0.00 | 2.188 | 6.34 | 2.22 | 4.5 | 95.5 | 0.0 | 0.74 | 2.26 | 0.66 | 0.86 | 3.06 | 10844 | 1314 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 8HiK | 34819 | 2023-04-20 | 2022-11-20 | 3.72 | 2.46 | 3.76 | 3.2 | 0.005 | 0.82 | 0.0 | 0.05 | 9.44 | 0.01 | 2.282 | 4.81 | 0.00 | 5.3 | 94.7 | 0.0 | -3.54 | 0.66 | 0.63 | 1.53 | 2.2 | 0.005 | 0.78 | 0.0 | 0.04 | 14.64 | 0.00 | 2.107 | 18.03 | 0.56 | 7.5 | 92.5 | 0.0 | -1.02 | 0.81 | 0.69 | 0.67 | 1.60 | 8238 | 1055 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8EFo | 28086 | 2023-04-22 | 2022-09-08 | 2.8 | 2.69 | 2.95 | 3.0 | 0.004 | 0.85 | 0.0 | 0.06 | 8.02 | 0.01 | 2.241 | 5.81 | 0.00 | 1.5 | 98.5 | 0.0 | -0.93 | 0.59 | 0.76 | 3.19 | 2.9 | 0.002 | 0.60 | 0.0 | 0.04 | 15.13 | 0.00 | 2.153 | 10.65 | 2.30 | 1.8 | 98.2 | 0.0 | 1.38 | 2.46 | 0.59 | 0.81 | 2.77 | 11708 | 1441 | 9 | 0 | 12 | 0 | 0 | logfile |
✔ | 8DTi | 27699 | 2023-04-21 | 2022-07-25 | 3.8 | 3.87 | — | 3.8 | 0.006 | 0.66 | 0.0 | 0.04 | 13.31 | 0.00 | 2.196 | 4.70 | 0.00 | 2.9 | 97.1 | 0.0 | 1.82 | 0.81 | 0.76 | 2.21 | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 15.22 | 0.00 | 2.204 | 8.20 | 0.43 | 2.3 | 97.7 | 0.0 | 1.89 | 0.40 | 0.82 | 0.79 | 2.07 | 9455 | 1258 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WoP | 32654 | 2023-04-20 | 2022-01-22 | 3.51 | 2.51 | — | 3.4 | 0.002 | 0.54 | 0.0 | 0.04 | 10.83 | 0.00 | 2.203 | 10.97 | 9.21 | 11.4 | 88.6 | 0.0 | -4.81 | 0.64 | 0.66 | 1.96 | 3.4 | 0.005 | 0.85 | 0.0 | 0.05 | 14.87 | 0.01 | 2.063 | 24.57 | 0.72 | 18.5 | 81.5 | 0.0 | -3.82 | 1.29 | 0.65 | 0.69 | 2.10 | 5107 | 669 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MAR | 9062 | 2023-04-25 | 2018-08-28 | 4.5 | 4.66 | 4.48 | 4.4 | 0.007 | 1.04 | 0.0 | 0.07 | 9.48 | 0.01 | 2.031 | 7.46 | 0.26 | 9.8 | 90.0 | 0.2 | -3.41 | 0.78 | 0.81 | — | 4.4 | 0.005 | 0.79 | 0.0 | 0.05 | 11.55 | 0.00 | 2.113 | 16.62 | 0.00 | 10.6 | 89.4 | 0.0 | -2.02 | 1.38 | 0.78 | 0.82 | — | 19211 | 2225 | 47 | 0 | 130 | 0 | 0 | logfile |
✔ | 7SHK | 25127 | 2023-04-21 | 2021-10-09 | 3.1 | 3.83 | — | 3.7 | 0.005 | 0.82 | 4.0 | 0.05 | 14.18 | 0.01 | 2.199 | 12.41 | 0.25 | 4.0 | 96.0 | 0.0 | -0.23 | 0.82 | 0.76 | 1.56 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 15.87 | 0.00 | 2.202 | 12.22 | 0.08 | 3.0 | 97.0 | 0.0 | 0.24 | 1.01 | 0.82 | 0.77 | 1.30 | 10485 | 1299 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Z4J | 14499 | 2023-04-23 | 2022-03-03 | 2.99 | 3.74 | 3.13 | 3.4 | 0.005 | 0.48 | 0.0 | 0.04 | 13.43 | 0.00 | 1.860 | 7.21 | 2.15 | 2.2 | 97.8 | 0.0 | 0.96 | 0.85 | 0.87 | 2.76 | 3.4 | 0.003 | 0.46 | 0.0 | 0.03 | 14.74 | 0.00 | 1.890 | 7.32 | 1.32 | 2.6 | 97.4 | 0.0 | 1.42 | 0.49 | 0.85 | 0.86 | 2.67 | 13948 | 1345 | 10 | 142 | 4 | 8 | 0 | logfile |
✔ | 7TGW | 25887 | 2023-04-27 | 2022-01-09 | 3.0 | 3.69 | — | 3.4 | 0.007 | 0.86 | 0.0 | 0.10 | 13.01 | 0.01 | 1.983 | 10.37 | 0.24 | 7.3 | 92.6 | 0.0 | -2.46 | 0.86 | 0.88 | 3.64 | 3.4 | 0.003 | 0.68 | 0.0 | 0.05 | 14.39 | 0.00 | 2.121 | 6.29 | 0.79 | 5.4 | 94.6 | 0.0 | -0.74 | 0.50 | 0.86 | 0.89 | 2.91 | 26617 | 3307 | 18 | 0 | 45 | 0 | 0 | logfile |
✔ | 7WU9 | 32824 | 2023-04-20 | 2022-02-07 | 3.375 | 3.51 | 3.21 | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 13.28 | 0.00 | 2.137 | 6.33 | 0.00 | 3.0 | 97.0 | 0.0 | 1.21 | 0.71 | 0.82 | 3.04 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 15.22 | 0.00 | 2.261 | 8.40 | 0.43 | 3.0 | 97.0 | 0.0 | 1.17 | 0.82 | 0.68 | 0.83 | 2.14 | 7369 | 1030 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CH1 | 30368 | 2023-04-21 | 2020-07-03 | 2.6 | 2.70 | — | 2.8 | 0.007 | 0.87 | 0.0 | 0.06 | 15.52 | 0.01 | 2.218 | 3.39 | 6.10 | 4.3 | 95.6 | 0.2 | -5.35 | 0.66 | 0.86 | 3.92 | 2.7 | 0.003 | 0.59 | 0.0 | 0.04 | 14.61 | 0.00 | 2.234 | 4.04 | 1.48 | 3.5 | 96.5 | 0.0 | 1.89 | 1.63 | 0.69 | 0.89 | 3.15 | 9948 | 1280 | 6 | 0 | 6 | 76 | 0 | logfile |
✔ | 7VD9 | 31911 | 2023-04-24 | 2021-09-06 | 2.29 | 1.75 | 2.28 | 1.8 | 0.002 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.194 | 7.80 | 2.33 | 3.8 | 96.2 | 0.0 | 0.41 | 0.58 | 0.72 | 3.68 | 1.8 | 0.003 | 0.57 | 0.0 | 0.04 | 17.52 | 0.01 | 2.206 | 7.90 | 2.62 | 3.9 | 96.1 | 0.0 | 0.00 | 0.30 | 0.58 | 0.73 | 3.61 | 16426 | 1991 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7Z03 | 14403 | 2023-04-24 | 2022-02-21 | 3.7 | 4.81 | 3.71 | 4.4 | 0.004 | 0.70 | 0.0 | 0.04 | 18.87 | 0.00 | 1.498 | 7.19 | 0.08 | 3.2 | 96.8 | 0.0 | 0.79 | 0.77 | 0.64 | 1.19 | 4.4 | 0.004 | 0.93 | 0.0 | 0.05 | 20.53 | 0.00 | 1.913 | 20.70 | 0.31 | 4.3 | 95.7 | 0.0 | -0.14 | 1.11 | 0.82 | 0.81 | 0.78 | 13396 | 1497 | 10 | 78 | 8 | 0 | 0 | logfile |
✔ | 7V2Q | 31660 | 2023-04-19 | 2021-08-09 | 3.24 | 3.12 | 3.13 | 3.0 | 0.008 | 1.14 | 2.0 | 0.10 | 15.54 | 0.00 | 2.189 | 6.75 | 0.16 | 6.4 | 93.6 | 0.1 | -1.01 | 0.82 | 0.86 | 1.80 | 2.9 | 0.006 | 0.70 | 0.0 | 0.04 | 16.49 | 0.01 | 2.111 | 10.94 | 0.62 | 6.6 | 93.3 | 0.0 | -0.43 | 1.48 | 0.82 | 0.88 | 2.05 | 52904 | 2875 | 25 | 1391 | 2 | 0 | 0 | logfile |
✔ | 6CS1 | 7579 | 2023-04-27 | 2018-03-19 | 4.6 | 4.79 | 4.84 | 6.8 | 0.006 | 0.92 | 0.0 | 0.06 | 8.77 | 0.01 | 2.229 | 7.26 | 0.00 | 7.2 | 92.8 | 0.0 | -4.20 | 0.61 | 0.31 | — | 4.6 | 0.007 | 1.10 | 1.0 | 0.06 | 11.78 | 0.01 | 1.900 | 35.89 | 0.00 | 11.7 | 88.3 | 0.0 | -3.21 | 1.93 | 0.71 | 0.58 | — | 25995 | 3202 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 7VX1 | 32167 | 2023-04-27 | 2021-11-12 | 3.5 | 2.44 | — | 3.4 | 0.002 | 0.49 | 1.0 | 0.04 | 7.46 | 0.00 | 1.753 | 8.22 | 0.00 | 4.3 | 95.7 | 0.1 | -2.11 | 0.63 | 0.59 | 1.22 | 2.1 | 0.003 | 0.65 | 0.0 | 0.04 | 13.20 | 0.00 | 2.098 | 11.64 | 0.11 | 3.0 | 96.9 | 0.0 | -0.65 | 1.38 | 0.66 | 0.64 | 1.34 | 25362 | 3237 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K9Q | 9952 | 2023-04-28 | 2019-06-17 | 3.1 | 3.28 | — | 3.5 | 0.007 | 1.09 | 4.0 | 0.06 | 11.35 | 0.01 | 1.554 | 9.55 | 0.29 | 6.3 | 93.6 | 0.1 | -3.33 | 0.51 | 0.77 | 2.45 | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 14.47 | 0.00 | 2.064 | 17.13 | 0.59 | 5.5 | 94.5 | 0.0 | -1.18 | 0.57 | 0.51 | 0.80 | 1.98 | 76902 | 10451 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WZ1 | 32901 | 2023-04-27 | 2022-02-16 | 3.4 | 2.58 | — | 2.2 | 0.003 | 0.66 | 0.0 | 0.04 | 9.42 | 0.00 | 2.212 | 7.59 | 5.40 | 7.6 | 92.4 | 0.0 | -4.14 | 0.74 | 0.73 | 2.32 | 3.2 | 0.003 | 0.73 | 0.0 | 0.05 | 14.50 | 0.00 | 2.065 | 11.73 | 0.94 | 9.0 | 91.0 | 0.0 | -1.91 | 1.35 | 0.76 | 0.77 | 2.16 | 24467 | 3092 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 7UX2 | 26846 | 2023-04-20 | 2022-05-04 | 2.9 | 3.04 | — | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 14.24 | 0.00 | 1.999 | 4.45 | 0.00 | 5.1 | 94.9 | 0.0 | 0.24 | 0.74 | 0.78 | 3.35 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 16.42 | 0.00 | 1.862 | 7.84 | 0.73 | 4.8 | 95.2 | 0.0 | 0.30 | 0.48 | 0.74 | 0.82 | 3.07 | 54396 | 3421 | 20 | 2 | 4 | 0 | 27147 | logfile |
✔ | 6VRW | 21372 | 2023-04-23 | 2020-02-10 | 3.71 | 4.25 | 3.76 | 4.0 | 0.007 | 0.93 | 0.0 | 0.07 | 13.94 | 0.00 | 2.301 | 4.29 | 0.40 | 7.8 | 92.2 | 0.0 | -4.95 | 0.81 | 0.81 | 2.33 | 4.0 | 0.003 | 0.66 | 0.0 | 0.05 | 15.29 | 0.00 | 2.173 | 8.27 | 0.13 | 6.7 | 93.3 | 0.0 | -2.19 | 0.43 | 0.82 | 0.82 | 2.45 | 14568 | 1671 | 36 | 0 | 96 | 0 | 0 | logfile |