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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7T8B | 25743 | 2024-03-22 | 2021-12-16 | 3.8 | 2.77 | 3.90 | 2.3 | 0.002 | 0.47 | 0.0 | 0.04 | 8.77 | 0.00 | 2.205 | 7.91 | 1.40 | 4.3 | 95.6 | 0.2 | -0.32 | 0.73 | 0.72 | 2.28 | 2.3 | 0.003 | 0.68 | 0.0 | 0.04 | 15.19 | 0.00 | 2.099 | 15.52 | 3.21 | 5.2 | 94.8 | 0.0 | -0.04 | 1.68 | 0.73 | 0.73 | 1.63 | 33025 | 4131 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AP4 | 15558 | 2024-03-18 | 2022-08-09 | 3.0 | 2.99 | 2.97 | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 22.71 | 0.02 | 1.999 | 4.06 | 1.62 | 3.6 | 96.3 | 0.1 | -0.03 | 0.86 | 0.88 | 2.78 | 3.1 | 0.007 | 0.72 | 0.0 | 0.04 | 22.59 | 0.01 | 2.006 | 10.95 | 4.60 | 4.4 | 95.6 | 0.0 | -0.44 | 0.87 | 0.86 | 0.88 | 2.61 | 88614 | 3266 | 33 | 2940 | 0 | 0 | 0 | logfile |
✔ | 7A4F | 11631 | 2024-03-20 | 2020-08-19 | 3.5 | 3.84 | 3.47 | 3.7 | 0.002 | 0.45 | 0.0 | 0.04 | 11.66 | 0.00 | 2.212 | 6.40 | 3.31 | 2.4 | 97.6 | 0.0 | 1.60 | 0.78 | 0.84 | 1.24 | 3.7 | 0.004 | 0.68 | 4.0 | 0.04 | 15.27 | 0.00 | 1.834 | 11.62 | 3.27 | 2.6 | 97.4 | 0.0 | 2.17 | 2.15 | 0.79 | 0.86 | 0.90 | 141432 | 18540 | 120 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C8X | 16494 | 2024-03-18 | 2023-01-21 | 3.93 | 4.35 | 4.27 | 3.9 | 0.004 | 0.40 | 0.0 | 0.03 | 22.69 | 0.00 | 1.690 | 6.44 | 0.30 | 4.8 | 95.1 | 0.1 | 0.41 | 0.80 | 0.74 | 0.78 | 3.9 | 0.005 | 0.64 | 0.0 | 0.03 | 23.51 | 0.00 | 1.724 | 19.94 | 4.47 | 8.1 | 91.9 | 0.0 | -1.43 | 1.45 | 0.82 | 0.80 | 1.08 | 82776 | 2832 | 28 | 2824 | 0 | 0 | 0 | logfile |
✔ | 7USW | 26741 | 2024-03-16 | 2022-04-26 | 3.1 | 3.48 | 3.14 | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 17.02 | 0.01 | 2.254 | 7.09 | 0.21 | 3.1 | 96.9 | 0.0 | 2.17 | 0.63 | 0.80 | 2.13 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.29 | 0.00 | 2.240 | 5.42 | 1.66 | 3.4 | 96.6 | 0.0 | 2.35 | 0.23 | 0.63 | 0.82 | 2.19 | 14322 | 1676 | 12 | 0 | 68 | 0 | 0 | logfile |
✔ | 7NYD | 12651 | 2024-03-23 | 2021-03-22 | 3.27 | 2.40 | 3.23 | 1.6 | 0.013 | 1.84 | 5.0 | 0.10 | 15.56 | 0.02 | 1.536 | 2.06 | 0.66 | 4.8 | 95.2 | 0.0 | -1.14 | 0.78 | 0.80 | 2.42 | 2.1 | 0.003 | 0.75 | 0.0 | 0.04 | 16.19 | 0.00 | 2.053 | 11.98 | 3.64 | 4.6 | 95.4 | 0.0 | -0.77 | 0.73 | 0.71 | 0.72 | 1.98 | 38430 | 4940 | 17 | 0 | 24 | 0 | 0 | logfile |
✔ | 8DD8 | 27336 | 2024-03-15 | 2022-06-17 | 3.4 | 3.50 | 3.43 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.62 | 0.00 | 2.211 | 7.34 | 0.00 | 4.0 | 95.9 | 0.1 | -0.65 | 0.81 | 0.81 | 2.33 | 3.4 | 0.002 | 0.51 | 0.0 | 0.04 | 16.84 | 0.00 | 2.188 | 10.11 | 0.60 | 4.1 | 95.9 | 0.0 | 0.47 | 1.22 | 0.83 | 0.84 | 1.89 | 10492 | 1272 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SX3 | 25492 | 2024-03-23 | 2021-11-22 | 3.1 | 2.52 | 3.30 | 1.7 | 0.004 | 0.66 | 0.0 | 0.04 | 14.79 | 0.01 | 2.199 | 3.25 | 0.00 | 2.8 | 97.2 | 0.0 | 0.09 | 0.73 | 0.81 | 2.40 | 1.8 | 0.002 | 0.59 | 0.0 | 0.04 | 16.18 | 0.00 | 2.099 | 6.03 | 1.18 | 2.2 | 97.8 | 0.0 | 2.44 | 0.44 | 0.74 | 0.84 | 1.66 | 37959 | 4608 | 6 | 0 | 85 | 0 | 0 | logfile |
✔ | 7L2E | 23126 | 2024-03-22 | 2020-12-16 | 2.97 | 3.51 | 3.04 | 3.4 | 0.007 | 1.11 | 25.0 | 0.08 | 12.30 | 0.01 | 2.217 | 4.30 | 0.34 | 2.8 | 97.2 | 0.0 | -0.67 | 0.75 | 0.79 | 3.18 | 3.4 | 0.005 | 0.74 | 1.0 | 0.05 | 13.74 | 0.00 | 1.647 | 8.12 | 1.89 | 3.2 | 96.8 | 0.0 | -0.42 | 0.45 | 0.74 | 0.83 | 3.32 | 32641 | 4050 | 36 | 0 | 78 | 0 | 0 | logfile |
✔ | 7E5R | 30993 | 2024-03-24 | 2021-02-20 | 3.6 | 4.15 | — | 3.6 | 0.004 | 0.68 | 0.0 | 0.05 | 13.50 | 0.01 | 1.953 | 18.81 | 0.37 | 9.1 | 90.7 | 0.2 | -4.12 | 0.78 | 0.67 | 1.38 | 3.6 | 0.004 | 0.65 | 0.0 | 0.04 | 15.07 | 0.00 | 2.081 | 14.40 | 2.10 | 8.3 | 91.7 | 0.0 | -1.87 | 0.66 | 0.83 | 0.80 | 1.51 | 40683 | 5262 | 36 | 0 | 30 | 0 | 0 | logfile |
✔ | 7SYL | 25532 | 2024-03-17 | 2021-11-25 | 4.5 | 3.40 | 4.38 | 3.3 | 0.004 | 0.87 | 0.0 | 0.04 | 22.27 | 0.01 | 2.191 | 6.19 | 0.02 | 6.6 | 93.4 | 0.0 | -3.03 | 0.63 | 0.59 | — | 3.3 | 0.005 | 0.81 | 0.0 | 0.04 | 22.53 | 0.01 | 2.044 | 20.42 | 0.02 | 9.8 | 90.1 | 0.0 | -2.22 | 1.08 | 0.66 | 0.64 | — | 78748 | 4891 | 38 | 1859 | 2 | 0 | 0 | logfile |
✔ | 7W92 | 32359 | 2024-03-19 | 2021-12-09 | 3.1 | 2.79 | — | 3.3 | 0.003 | 0.67 | 0.0 | 0.05 | 13.05 | 0.01 | 2.306 | 2.89 | 0.11 | 3.7 | 96.3 | 0.0 | -4.34 | 0.80 | 0.76 | 2.05 | 3.3 | 0.005 | 0.72 | 0.0 | 0.05 | 15.68 | 0.00 | 2.051 | 10.55 | 2.89 | 6.3 | 93.7 | 0.0 | -1.34 | 1.44 | 0.81 | 0.81 | 2.21 | 25071 | 3206 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T3T | 25670 | 2024-03-15 | 2021-12-08 | 3.8 | 4.12 | 3.99 | 4.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.36 | 0.00 | 2.071 | 8.23 | 0.05 | 4.3 | 95.7 | 0.0 | 1.40 | 0.73 | 0.78 | 1.63 | 4.0 | 0.006 | 0.80 | 0.0 | 0.04 | 16.76 | 0.00 | 2.001 | 17.09 | 3.09 | 5.6 | 94.4 | 0.0 | 0.32 | 0.94 | 0.75 | 0.84 | 1.31 | 68516 | 8408 | 8 | 0 | 92 | 0 | 0 | logfile |
✔ | 6NYN | 0547 | 2024-03-15 | 2019-02-11 | 3.5 | 4.40 | — | 4.1 | 0.006 | 1.01 | 0.0 | 0.06 | 10.55 | 0.01 | 2.259 | 7.62 | 0.97 | 16.7 | 83.3 | 0.0 | -5.19 | 0.87 | 0.77 | 2.69 | 4.1 | 0.007 | 0.79 | 0.0 | 0.05 | 12.66 | 0.00 | 2.141 | 19.41 | 2.53 | 20.9 | 79.1 | 0.0 | -4.77 | 0.50 | 0.88 | 0.80 | 2.24 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T3N | 25665 | 2024-03-10 | 2021-12-08 | 3.0 | 3.31 | — | 3.3 | 0.009 | 0.73 | 0.0 | 0.05 | 16.81 | 0.01 | 2.131 | 5.13 | 0.00 | 4.7 | 95.3 | 0.0 | -3.24 | 0.51 | 0.85 | 3.81 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 15.58 | 0.00 | 2.287 | 7.63 | 1.45 | 2.9 | 97.1 | 0.0 | 0.20 | 0.40 | 0.49 | 0.84 | 2.67 | 3512 | 452 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WFF | 32464 | 2024-03-22 | 2021-12-26 | 3.59 | 3.67 | — | 3.6 | 0.006 | 0.94 | 1.0 | 0.08 | 14.28 | 0.01 | 2.203 | 4.83 | 0.26 | 9.0 | 90.9 | 0.1 | -4.02 | 0.60 | 0.79 | 2.16 | 3.6 | 0.003 | 0.75 | 0.0 | 0.05 | 16.48 | 0.00 | 2.160 | 16.29 | 2.86 | 8.0 | 92.0 | 0.0 | -1.21 | 1.21 | 0.60 | 0.79 | 1.65 | 32124 | 4065 | 20 | 0 | 4 | 0 | 0 | logfile |
✔ | 8C90 | 16497 | 2024-03-12 | 2023-01-21 | 3.15 | 3.51 | 3.31 | 3.1 | 0.002 | 0.38 | 0.0 | 0.03 | 22.69 | 0.00 | 1.866 | 5.45 | 0.00 | 5.1 | 94.8 | 0.0 | 0.48 | 0.79 | 0.79 | 1.77 | 3.2 | 0.005 | 0.67 | 1.0 | 0.04 | 22.98 | 0.00 | 2.026 | 13.54 | 3.66 | 8.0 | 92.0 | 0.0 | -0.91 | 0.50 | 0.81 | 0.84 | 1.82 | 64726 | 2183 | 22 | 2219 | 0 | 0 | 0 | logfile |
✔ | 7KFT | 22855 | 2024-03-15 | 2020-10-14 | 3.4 | 3.68 | — | 3.6 | 0.005 | 0.83 | 0.0 | 0.05 | 14.40 | 0.01 | 2.237 | 5.46 | 0.00 | 4.8 | 95.2 | 0.0 | -0.99 | 0.69 | 0.79 | 2.73 | 3.6 | 0.003 | 0.81 | 1.0 | 0.04 | 16.17 | 0.00 | 2.165 | 6.95 | 1.43 | 3.6 | 96.4 | 0.0 | 0.58 | 0.38 | 0.69 | 0.80 | 2.19 | 11680 | 1427 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q9K | 13872 | 2024-03-20 | 2021-11-12 | 4.5 | 7.17 | — | 4.5 | 0.005 | 0.88 | 1.0 | 0.05 | 11.19 | 0.01 | 1.447 | 5.50 | 0.44 | 3.7 | 95.9 | 0.4 | 0.13 | 0.82 | 0.65 | — | 4.5 | 0.004 | 0.73 | 0.0 | 0.05 | 11.75 | 0.00 | 2.055 | 24.81 | 0.00 | 6.1 | 93.9 | 0.0 | -0.72 | 1.60 | 0.85 | 0.74 | — | 27225 | 3388 | 25 | 0 | 60 | 0 | 0 | logfile |
✔ | 7SYR | 25538 | 2024-03-18 | 2021-11-25 | 3.6 | 3.11 | 3.52 | 3.0 | 0.003 | 0.81 | 0.0 | 0.04 | 22.02 | 0.01 | 2.281 | 4.37 | 0.14 | 4.8 | 95.2 | 0.0 | -2.24 | 0.63 | 0.68 | 0.87 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 22.54 | 0.00 | 1.989 | 11.75 | 4.32 | 6.5 | 93.5 | 0.0 | -0.83 | 1.77 | 0.67 | 0.78 | 1.75 | 83005 | 5177 | 40 | 1960 | 1 | 0 | 0 | logfile |