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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NYX | 12657 | 2022-12-14 | 2021-03-23 | 4.6 | 7.95 | 4.57 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 17.26 | 0.00 | 1.844 | 11.25 | 0.00 | 3.4 | 96.6 | 0.0 | 1.74 | 0.88 | 0.79 | — | 3.3 | 0.006 | 0.71 | 0.0 | 0.04 | 17.13 | 0.01 | 0.691 | 27.95 | 0.00 | 6.7 | 93.3 | 0.0 | -0.40 | 1.56 | 0.90 | 0.84 | — | 70784 | 4186 | 18 | 104 | 6 | 0 | 34688 | logfile |
✔ | 7AFL | 11769 | 2022-12-18 | 2020-09-19 | 4.2 | 5.13 | 4.56 | 3.0 | 0.010 | 1.08 | 6.0 | 0.06 | 17.44 | 0.01 | 1.852 | 43.80 | 0.00 | 6.0 | 94.0 | 0.0 | -1.84 | 0.89 | 0.87 | — | 2.8 | 0.006 | 0.75 | 0.0 | 0.04 | 16.54 | 0.01 | 1.824 | 42.74 | 0.00 | 6.4 | 93.6 | 0.0 | -1.43 | 0.72 | 0.89 | 0.88 | — | 34322 | 1487 | 15 | 1054 | 25 | 0 | 0 | logfile |
✔ | 7L8W | 23238 | 2022-12-13 | 2021-01-01 | 4.1 | 4.21 | 3.98 | 4.1 | 0.020 | 1.68 | 0.0 | 0.13 | 9.89 | 0.02 | 2.347 | 1.38 | 0.00 | 1.7 | 98.3 | 0.0 | 1.14 | 0.72 | 0.82 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.05 | 13.28 | 0.00 | 2.155 | 10.53 | 0.00 | 2.4 | 97.4 | 0.2 | -0.06 | 1.39 | 0.73 | 0.82 | — | 15803 | 1714 | 22 | 0 | 298 | 0 | 0 | logfile |
✔ | 7ABK | 11698 | 2022-12-11 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.003 | 0.66 | 0.0 | 0.03 | 19.91 | 0.00 | 2.304 | 7.87 | 0.00 | 2.1 | 97.9 | 0.0 | 5.18 | 1.55 | 0.28 | 0.85 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MR2 | 23954 | 2022-12-13 | 2021-05-07 | 4.3 | 4.72 | — | 4.5 | 0.003 | 0.75 | 0.0 | 0.05 | 14.96 | 0.01 | 2.257 | 5.86 | 0.00 | 5.1 | 94.9 | 0.0 | -1.32 | 0.90 | 0.84 | — | 4.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.98 | 0.00 | 2.153 | 10.06 | 0.00 | 4.6 | 95.4 | 0.0 | 0.28 | 0.29 | 0.90 | 0.84 | — | 16671 | 2075 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R7T | 24304 | 2022-12-19 | 2021-06-25 | 4.5 | 4.85 | — | 4.6 | 0.004 | 1.02 | 0.0 | 0.06 | 15.88 | 0.01 | 2.286 | 6.32 | 0.00 | 7.8 | 92.2 | 0.0 | -3.13 | 0.81 | 0.73 | — | 4.6 | 0.004 | 0.83 | 0.0 | 0.05 | 15.09 | 0.01 | 2.078 | 24.59 | 0.00 | 9.3 | 90.7 | 0.0 | -1.84 | 0.94 | 0.82 | 0.76 | — | 35351 | 4470 | 13 | 0 | 12 | 0 | 0 | logfile |
✔ | 6XoS | 22278 | 2022-12-11 | 2020-07-07 | 3.7 | 4.30 | 3.63 | 3.9 | 0.009 | 1.09 | 0.0 | 0.06 | 13.21 | 0.01 | 2.225 | 3.14 | 0.00 | 2.4 | 97.6 | 0.0 | -1.45 | 0.89 | 0.82 | 1.85 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 14.49 | 0.00 | 2.152 | 9.23 | 0.00 | 2.1 | 97.9 | 0.0 | 1.57 | 0.98 | 0.89 | 0.85 | 1.92 | 7704 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M9C | 23723 | 2022-12-16 | 2021-03-30 | 4.2 | 4.61 | 3.85 | 4.2 | 0.003 | 0.64 | 4.0 | 0.04 | 14.80 | 0.00 | 1.350 | 9.52 | 0.10 | 2.6 | 97.3 | 0.1 | 0.09 | 0.78 | 0.67 | — | 4.3 | 0.003 | 0.76 | 0.0 | 0.05 | 15.33 | 0.00 | 2.088 | 15.34 | 0.00 | 2.6 | 97.3 | 0.1 | 0.74 | 6.10 | 0.83 | 0.83 | — | 30517 | 3598 | 26 | 66 | 10 | 0 | 0 | logfile |
✔ | 7EA8 | 31040 | 2022-12-13 | 2021-03-06 | 3.1 | 3.23 | — | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 24.03 | 0.01 | 2.306 | 1.94 | 0.00 | 3.7 | 96.3 | 0.0 | -3.23 | 0.69 | 0.78 | 2.67 | 3.2 | 0.005 | 0.60 | 0.0 | 0.04 | 25.92 | 0.00 | 2.189 | 5.15 | 0.00 | 5.1 | 94.9 | 0.0 | -0.12 | 0.62 | 0.74 | 0.86 | 2.08 | 12865 | 984 | 12 | 244 | 4 | 0 | 0 | logfile |
✔ | 7BZY | 30263 | 2022-12-11 | 2020-04-29 | 3.7 | 5.07 | 3.67 | 2.9 | 0.005 | 1.03 | 0.0 | 0.05 | 7.60 | 0.00 | 2.175 | 11.89 | 0.00 | 15.0 | 84.6 | 0.3 | -5.26 | 0.62 | 0.47 | — | 3.4 | 0.003 | 0.80 | 0.0 | 0.05 | 5.52 | 0.00 | 2.116 | 12.77 | 0.00 | 14.4 | 85.6 | 0.0 | -2.69 | 1.26 | 0.85 | 0.74 | — | 6169 | 1260 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EoQ | 31227 | 2022-12-15 | 2021-04-22 | 4.1 | 4.43 | — | 4.1 | 0.002 | 0.46 | 0.0 | 0.04 | 9.71 | 0.00 | 2.195 | 7.83 | 2.14 | 4.7 | 95.3 | 0.0 | 0.09 | 0.86 | 0.74 | — | 4.1 | 0.004 | 0.66 | 0.0 | 0.04 | 11.25 | 0.00 | 2.124 | 17.22 | 0.00 | 7.9 | 92.1 | 0.0 | -0.78 | 1.25 | 0.89 | 0.80 | — | 24742 | 3144 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7EU7 | 31308 | 2022-12-14 | 2021-05-16 | 3.5 | 3.93 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.05 | 13.10 | 0.01 | 2.172 | 16.47 | 2.99 | 5.0 | 94.8 | 0.1 | -0.02 | 0.83 | 0.83 | 2.68 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 13.49 | 0.00 | 2.183 | 7.75 | 0.00 | 4.7 | 95.3 | 0.0 | 0.13 | 0.30 | 0.84 | 0.85 | 2.39 | 21773 | 3134 | 8 | 0 | 25 | 0 | 0 | logfile |
✔ | 7N9A | 24253 | 2022-12-11 | 2021-06-17 | 3.5 | 2.68 | — | 2.4 | 0.007 | 1.26 | 0.0 | 0.06 | 12.63 | 0.01 | 2.135 | 19.96 | 0.00 | 2.9 | 97.1 | 0.0 | -0.16 | 0.72 | 0.70 | 2.72 | 2.4 | 0.003 | 0.70 | 0.0 | 0.04 | 15.37 | 0.00 | 2.164 | 15.13 | 0.00 | 3.2 | 96.8 | 0.0 | -0.99 | 0.55 | 0.73 | 0.70 | 2.49 | 2431 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EoU | 31231 | 2022-12-15 | 2021-04-22 | 4.3 | 4.50 | — | 4.2 | 0.002 | 0.43 | 0.0 | 0.04 | 8.92 | 0.00 | 2.243 | 9.25 | 1.92 | 3.9 | 96.0 | 0.1 | 0.78 | 0.86 | 0.73 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 11.30 | 0.00 | 2.066 | 15.92 | 0.00 | 6.3 | 93.7 | 0.1 | -0.32 | 1.65 | 0.89 | 0.80 | — | 24593 | 3084 | 8 | 0 | 19 | 0 | 0 | logfile |
✔ | 7NT6 | 12584 | 2022-12-15 | 2021-03-09 | 4.3 | 4.34 | 3.99 | 3.3 | 0.012 | 2.07 | 0.0 | 0.15 | 8.75 | 0.01 | 2.119 | 1.13 | 0.00 | 4.0 | 95.6 | 0.3 | -2.44 | 0.72 | 0.76 | — | 3.2 | 0.003 | 0.66 | 0.0 | 0.05 | 8.24 | 0.00 | 2.143 | 3.83 | 0.00 | 6.3 | 93.7 | 0.0 | 2.06 | 0.62 | 0.71 | 0.72 | — | 24128 | 5582 | 17 | 90 | 0 | 0 | 0 | logfile |
✔ | 6XLD | 22240 | 2022-12-12 | 2020-06-28 | 3.66 | 3.78 | — | 3.7 | 0.003 | 0.51 | 0.0 | 0.04 | 9.94 | 0.00 | 2.061 | 5.73 | 0.58 | 1.5 | 98.5 | 0.0 | -3.76 | 0.77 | 0.75 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 14.50 | 0.00 | 1.951 | 10.18 | 0.00 | 3.1 | 96.9 | 0.0 | -0.23 | 1.41 | 0.80 | 0.81 | 2.33 | 10992 | 1349 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7AFK | 11768 | 2022-12-14 | 2020-09-19 | 4.9 | 5.45 | 4.73 | 3.0 | 0.008 | 0.88 | 1.0 | 0.05 | 18.40 | 0.02 | 1.519 | 42.50 | 0.00 | 8.4 | 91.6 | 0.0 | -2.88 | 0.87 | 0.80 | — | 2.9 | 0.006 | 0.83 | 0.0 | 0.04 | 18.01 | 0.01 | 1.817 | 46.34 | 0.00 | 7.5 | 92.5 | 0.0 | -1.52 | 0.78 | 0.88 | 0.85 | — | 18521 | 1108 | 11 | 456 | 13 | 0 | 0 | logfile |
✔ | 7EU8 | 31309 | 2022-12-14 | 2021-05-16 | 4.07 | 4.11 | — | 3.6 | 0.002 | 0.41 | 0.0 | 0.04 | 8.07 | 0.00 | 2.206 | 3.16 | 3.51 | 2.0 | 97.9 | 0.1 | 1.10 | 0.75 | 0.61 | — | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 8.85 | 0.00 | 2.112 | 8.24 | 0.00 | 4.3 | 95.5 | 0.2 | -0.27 | 1.40 | 0.78 | 0.69 | — | 18670 | 3010 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7AA5 | 11690 | 2022-12-14 | 2020-09-03 | 4.18 | 4.64 | — | 4.4 | 0.006 | 0.92 | 2.0 | 0.04 | 14.67 | 0.00 | 2.119 | 21.52 | 2.04 | 15.1 | 84.7 | 0.2 | -4.78 | 0.69 | 0.80 | — | 4.4 | 0.002 | 0.53 | 0.0 | 0.03 | 13.33 | 0.00 | 1.967 | 63.92 | 0.00 | 11.6 | 88.2 | 0.2 | -0.23 | 1.11 | 0.68 | 0.79 | — | 19705 | 2448 | 5 | 0 | 1 | 0 | 8 | logfile |
✔ | 7oQC | 13029 | 2022-12-19 | 2021-06-03 | 4.1 | 4.04 | 4.09 | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 13.70 | 0.05 | 2.245 | 4.49 | 0.58 | 4.5 | 95.4 | 0.1 | -3.86 | 0.57 | 0.63 | — | 4.0 | 0.003 | 1.07 | 0.0 | 0.04 | 14.98 | 0.01 | 2.085 | 13.96 | 0.00 | 5.0 | 94.9 | 0.1 | 0.42 | 0.96 | 0.60 | 0.69 | — | 35050 | 3078 | 18 | 568 | 53 | 0 | 0 | logfile |