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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6G4W | 4349 | 2024-03-25 | 2018-03-28 | 4.5 | 5.22 | — | 4.4 | 0.006 | 1.11 | 2.0 | 0.07 | 23.58 | 0.01 | 0.760 | 5.05 | 0.00 | 8.2 | 91.5 | 0.3 | -3.51 | 0.65 | 0.51 | — | 4.3 | 0.002 | 0.57 | 0.0 | 0.03 | 24.29 | 0.00 | 2.097 | 6.33 | 0.00 | 6.9 | 93.0 | 0.0 | 0.20 | 2.48 | 0.87 | 0.63 | — | 45223 | 4589 | 31 | 1563 | 768 | 0 | 0 | logfile |
✔ | 8i7N | 35223 | 2024-03-11 | 2023-02-01 | 2.98 | 3.12 | 2.92 | 3.0 | 0.006 | 0.66 | 0.0 | 0.04 | 23.30 | 0.00 | 1.982 | 2.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.82 | 0.83 | — | 3.0 | 0.008 | 0.74 | 0.0 | 0.04 | 23.13 | 0.01 | 1.929 | 5.26 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.87 | 0.91 | — | 8979 | 0 | 1 | 418 | 29 | 0 | 0 | logfile |
✔ | 6VoJ | 21266 | 2024-03-23 | 2020-01-30 | 4.34 | 3.41 | — | 3.3 | 0.005 | 0.93 | 0.0 | 0.05 | 16.10 | 0.01 | 2.217 | 9.75 | 0.39 | 5.9 | 94.0 | 0.1 | -3.58 | 0.74 | 0.66 | — | 3.3 | 0.003 | 0.71 | 0.0 | 0.04 | 15.10 | 0.00 | 2.122 | 15.21 | 0.00 | 4.9 | 95.1 | 0.1 | -0.66 | 1.26 | 0.73 | 0.66 | — | 39155 | 5185 | 32 | 0 | 7 | 0 | 0 | logfile |
✔ | 7TFo | 25878 | 2024-03-21 | 2022-01-06 | 4.1 | 3.83 | — | 3.8 | 0.006 | 0.74 | 0.0 | 0.05 | 14.99 | 0.01 | 2.118 | 16.68 | 0.21 | 8.9 | 91.1 | 0.0 | -1.50 | 0.74 | 0.73 | — | 3.7 | 0.005 | 0.72 | 0.0 | 0.05 | 13.53 | 0.00 | 2.102 | 15.71 | 0.00 | 9.1 | 90.9 | 0.0 | -1.41 | 1.04 | 0.75 | 0.77 | — | 17774 | 2283 | 20 | 0 | 21 | 0 | 0 | logfile |
✔ | 8CPV | 16787 | 2024-03-23 | 2023-03-03 | 1.76 | 1.73 | 1.80 | 1.7 | 0.006 | 0.91 | 0.0 | 0.07 | 14.41 | 0.01 | 2.182 | 2.58 | 0.00 | 1.0 | 99.0 | 0.0 | 2.15 | 0.78 | 0.84 | 8.93 | 1.7 | 0.002 | 0.49 | 0.0 | 0.03 | 14.99 | 0.00 | 2.274 | 3.00 | 0.00 | 1.8 | 98.2 | 0.0 | 4.87 | 1.19 | 0.81 | 0.87 | 8.51 | 35855 | 4152 | 72 | 0 | 38 | 1737 | 0 | logfile |
✔ | 7U2A | 26310 | 2024-03-11 | 2022-02-23 | 4.1 | 3.51 | — | 4.0 | 0.010 | 1.05 | 0.0 | 0.05 | 18.07 | 0.00 | 1.918 | 11.25 | 0.31 | 0.5 | 99.5 | 0.0 | 2.04 | 0.59 | 0.61 | — | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 17.87 | 0.01 | 2.138 | 16.31 | 0.00 | 2.9 | 97.1 | 0.0 | -0.16 | 1.06 | 0.66 | 0.73 | — | 6855 | 761 | 5 | 38 | 2 | 0 | 0 | logfile |
✔ | 6TNZ | 10540 | 2024-03-18 | 2019-12-10 | 4.05 | 4.32 | — | 3.9 | 0.009 | 1.14 | 2.0 | 0.07 | 17.56 | 0.01 | 1.874 | 14.11 | 1.57 | 7.8 | 91.1 | 1.1 | -3.76 | 0.78 | 0.60 | — | 3.9 | 0.004 | 0.73 | 0.0 | 0.04 | 16.13 | 0.00 | 2.138 | 12.45 | 0.00 | 6.0 | 94.0 | 0.0 | -1.11 | 2.39 | 0.87 | 0.77 | — | 22008 | 2705 | 11 | 50 | 3 | 0 | 0 | logfile |
✔ | 7V02 | 26927 | 2024-03-17 | 2022-05-09 | 4.97 | 8.16 | 5.87 | 4.6 | 0.006 | 0.93 | 0.0 | 0.06 | 14.12 | 0.00 | 2.048 | 13.24 | 0.65 | 4.8 | 95.1 | 0.0 | -1.12 | 0.83 | 0.64 | — | 4.7 | 0.003 | 0.61 | 0.0 | 0.04 | 14.47 | 0.00 | 2.131 | 18.62 | 0.00 | 3.5 | 96.5 | 0.0 | 0.15 | 1.08 | 0.91 | 0.81 | — | 17417 | 2070 | 9 | 29 | 0 | 0 | 0 | logfile |
✔ | 6HV8 | 0287 | 2024-03-14 | 2018-10-10 | 4.4 | 4.51 | — | 4.4 | 0.009 | 1.62 | 2.0 | 0.08 | 10.20 | 0.01 | 1.472 | 8.97 | 1.31 | 22.1 | 77.3 | 0.6 | -4.84 | 0.74 | 0.72 | — | 4.4 | 0.004 | 0.87 | 0.0 | 0.05 | 12.77 | 0.00 | 2.006 | 19.26 | 0.00 | 16.8 | 83.2 | 0.0 | -3.11 | 1.00 | 0.75 | 0.72 | — | 9206 | 1184 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 5YWC | 6852 | 2024-03-25 | 2017-11-29 | 4.3 | 4.48 | 4.24 | 4.3 | 0.004 | 0.80 | 0.0 | 0.04 | 14.47 | 0.00 | 2.030 | 14.74 | 7.97 | 4.4 | 95.3 | 0.4 | -1.76 | 0.66 | 0.75 | — | 4.3 | 0.004 | 0.76 | 0.0 | 0.04 | 12.91 | 0.00 | 1.938 | 14.87 | 0.00 | 4.4 | 95.5 | 0.1 | 0.76 | 3.33 | 0.68 | 0.80 | — | 51108 | 6588 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 7TBZ | 25802 | 2024-03-16 | 2021-12-22 | 4.3 | 4.56 | 4.01 | 4.0 | 0.002 | 0.56 | 0.0 | 0.04 | 14.93 | 0.00 | 2.207 | 6.66 | 0.00 | 3.8 | 96.2 | 0.1 | -2.61 | 0.70 | 0.77 | — | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 12.03 | 0.00 | 2.157 | 9.99 | 0.00 | 5.9 | 94.1 | 0.0 | 0.20 | 2.65 | 0.72 | 0.82 | — | 13275 | 1788 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 6TNG | 10532 | 2024-03-11 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.00 | 6.39 | 0.00 | 2.200 | 10.87 | 0.00 | 22.8 | 77.1 | 0.1 | -3.08 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DS6 | 27684 | 2024-03-14 | 2022-07-21 | 4.9 | 4.18 | 4.54 | 3.7 | 0.012 | 1.43 | 0.0 | 0.06 | 10.65 | 0.01 | 2.494 | 0.39 | 0.00 | 1.4 | 98.6 | 0.0 | 1.06 | 0.85 | 0.67 | — | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 11.45 | 0.01 | 2.212 | 9.28 | 0.00 | 2.3 | 97.7 | 0.0 | 1.68 | 1.09 | 0.85 | 0.63 | — | 10135 | 669 | 2 | 0 | 0 | 0 | 5107 | logfile |
✔ | 7PDE | 13335 | 2024-03-14 | 2021-08-05 | 4.5 | 4.95 | — | 4.5 | 0.006 | 0.79 | 0.0 | 0.04 | 14.84 | 0.00 | 1.869 | 29.42 | 0.19 | 9.2 | 90.8 | 0.0 | -3.63 | 0.69 | 0.80 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.04 | 14.21 | 0.00 | 1.997 | 15.73 | 0.00 | 4.9 | 95.1 | 0.0 | 0.05 | 1.33 | 0.68 | 0.79 | — | 9553 | 1187 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 7E8H | 31019 | 2024-03-24 | 2021-03-01 | 4.5 | 4.06 | 4.44 | 3.7 | 0.002 | 0.62 | 0.0 | 0.04 | 14.21 | 0.00 | 2.089 | 18.26 | 0.00 | 6.9 | 93.0 | 0.1 | -0.78 | 0.73 | 0.62 | — | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.28 | 0.00 | 2.118 | 20.71 | 0.00 | 8.1 | 91.9 | 0.0 | -1.10 | 0.43 | 0.78 | 0.73 | — | 44894 | 5576 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E8S | 31021 | 2024-03-25 | 2021-03-02 | 4.36 | 4.87 | — | 4.2 | 0.007 | 1.44 | 6.0 | 0.08 | 14.38 | 0.01 | 1.149 | 8.12 | 0.55 | 9.7 | 89.4 | 0.8 | -4.63 | 0.75 | 0.47 | — | 4.0 | 0.005 | 0.90 | 0.0 | 0.05 | 13.37 | 0.00 | 2.016 | 27.25 | 0.00 | 12.8 | 87.0 | 0.2 | -2.64 | 1.26 | 0.87 | 0.72 | — | 46554 | 6572 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZN2 | 14799 | 2024-03-18 | 2022-04-20 | 4.29 | 3.73 | 4.16 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 13.12 | 0.00 | 2.048 | 7.87 | 0.00 | 3.5 | 96.5 | 0.0 | -1.30 | 0.80 | 0.72 | — | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 13.04 | 0.00 | 2.091 | 13.42 | 0.00 | 3.7 | 96.3 | 0.0 | -0.93 | 2.06 | 0.84 | 0.80 | — | 89393 | 11481 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DDW | 27344 | 2024-03-20 | 2022-06-19 | 4.7 | 4.19 | 4.62 | 4.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.47 | 0.00 | 2.179 | 11.42 | 8.35 | 5.4 | 94.5 | 0.1 | 0.15 | 0.72 | 0.61 | — | 4.0 | 0.003 | 0.71 | 0.0 | 0.04 | 13.66 | 0.00 | 2.020 | 15.55 | 0.00 | 5.7 | 94.3 | 0.0 | -0.05 | 1.69 | 0.78 | 0.74 | — | 25869 | 3198 | 10 | 0 | 68 | 0 | 0 | logfile |
✔ | 6TNF | 10531 | 2024-03-14 | 2019-12-07 | 3.8 | 2.90 | 3.67 | 2.7 | 0.032 | 1.64 | 0.0 | 0.32 | 18.93 | 0.01 | 2.236 | 8.40 | 0.00 | 17.8 | 81.5 | 0.7 | -5.32 | 0.60 | 0.56 | — | 2.6 | 0.006 | 1.19 | 0.0 | 0.10 | 15.66 | 0.01 | 2.088 | 17.70 | 0.00 | 21.3 | 78.6 | 0.1 | -4.12 | 0.55 | 0.65 | 0.64 | — | 9559 | 2206 | 5 | 0 | 66 | 0 | 0 | logfile |
✔ | 7RRA | 24657 | 2024-03-14 | 2021-08-09 | 4.4 | 4.79 | — | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.75 | 0.00 | 2.261 | 9.42 | 0.00 | 3.0 | 97.0 | 0.0 | 1.98 | 0.62 | 0.57 | — | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 14.12 | 0.00 | 2.255 | 14.49 | 0.00 | 3.8 | 96.2 | 0.0 | 1.41 | 1.89 | 0.65 | 0.62 | — | 9608 | 1204 | 2 | 0 | 0 | 0 | 0 | logfile |