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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NKi | 12440 | 2024-03-20 | 2021-02-18 | 4.67 | 4.96 | — | 4.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.26 | 0.01 | 1.908 | 8.85 | 0.00 | 4.0 | 96.0 | 0.0 | -0.64 | 0.67 | 0.41 | — | 4.6 | 0.004 | 0.69 | 0.0 | 0.04 | 14.72 | 0.01 | 1.866 | 21.82 | 0.00 | 6.4 | 93.6 | 0.0 | -1.05 | 2.35 | 0.80 | 0.65 | — | 28775 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8HJW | 34840 | 2024-03-17 | 2022-11-24 | 4.1 | 4.34 | 4.18 | 4.2 | 0.003 | 0.70 | 0.0 | 0.04 | 13.47 | 0.00 | 2.134 | 13.05 | 0.47 | 2.2 | 97.5 | 0.3 | 0.71 | 0.80 | 0.70 | — | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 13.40 | 0.00 | 2.090 | 14.04 | 0.00 | 2.7 | 97.2 | 0.1 | 0.86 | 1.24 | 0.83 | 0.77 | — | 18516 | 2430 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CGL | 16647 | 2024-03-20 | 2023-02-05 | 4.1 | 6.82 | 4.33 | 4.1 | 0.008 | 1.07 | 4.0 | 0.07 | 5.62 | 0.01 | 2.267 | 9.85 | 4.00 | 7.0 | 92.8 | 0.2 | -0.82 | 0.83 | 0.66 | — | 4.2 | 0.004 | 0.69 | 0.0 | 0.05 | 4.51 | 0.00 | 2.176 | 8.72 | 0.00 | 8.4 | 91.6 | 0.0 | -0.02 | 1.39 | 0.90 | 0.82 | — | 16732 | 2212 | 4 | 0 | 0 | 0 | 5572 | logfile |
✔ | 8iER | 35391 | 2024-03-16 | 2023-02-15 | 4.87 | 5.08 | 4.32 | 4.9 | 0.002 | 0.53 | 0.0 | 0.04 | 12.91 | 0.00 | 1.978 | 6.35 | 0.00 | 7.4 | 92.3 | 0.3 | -0.61 | 0.48 | 0.46 | — | 4.9 | 0.002 | 0.56 | 0.0 | 0.04 | 12.81 | 0.00 | 1.919 | 8.70 | 0.00 | 10.5 | 89.2 | 0.3 | -1.03 | 1.27 | 0.52 | 0.56 | — | 15257 | 967 | 2 | 0 | 1 | 0 | 7758 | logfile |
✔ | 6VRS | 21371 | 2024-03-15 | 2020-02-09 | 2.7 | 3.22 | — | 2.9 | 0.008 | 1.49 | 5.0 | 0.11 | 14.48 | 0.01 | 2.012 | 2.39 | 1.82 | 3.1 | 96.6 | 0.3 | -0.31 | 0.95 | 0.92 | 6.32 | 2.9 | 0.002 | 0.46 | 0.0 | 0.04 | 15.04 | 0.00 | 2.120 | 6.00 | 0.00 | 2.1 | 97.9 | 0.0 | 2.31 | 1.01 | 0.93 | 0.90 | 4.29 | 12208 | 1548 | 12 | 0 | 8 | 16 | 0 | logfile |
✔ | 8oSH | 17153 | 2024-03-11 | 2023-04-18 | 4.9 | 5.59 | 5.45 | 4.9 | 0.006 | 0.94 | 0.0 | 0.06 | 3.38 | 0.00 | 2.299 | 5.83 | 0.00 | 11.2 | 88.7 | 0.1 | -0.55 | 0.82 | 0.82 | — | 4.9 | 0.003 | 0.65 | 0.0 | 0.04 | 4.66 | 0.00 | 2.198 | 8.69 | 0.00 | 15.1 | 84.9 | 0.0 | -0.88 | 0.53 | 0.83 | 0.85 | — | 6770 | 1372 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q0N | 18056 | 2024-03-16 | 2023-07-28 | 4.2 | 4.02 | 3.99 | 4.1 | 0.002 | 0.48 | 0.0 | 0.04 | 13.78 | 0.00 | 2.181 | 5.46 | 0.00 | 1.7 | 98.3 | 0.0 | 1.28 | 0.56 | 0.43 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.26 | 0.00 | 1.972 | 11.36 | 0.00 | 4.0 | 96.0 | 0.0 | 0.13 | 1.04 | 0.69 | 0.65 | — | 15917 | 1009 | 4 | 0 | 2 | 0 | 7910 | logfile |
✔ | 7Y59 | 33613 | 2024-03-24 | 2022-06-16 | 4.51 | 4.79 | 4.61 | 4.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.92 | 0.00 | 2.117 | 15.86 | 0.00 | 8.1 | 91.5 | 0.4 | -0.24 | 0.70 | 0.73 | — | 4.6 | 0.004 | 0.75 | 0.0 | 0.05 | 14.52 | 0.00 | 2.077 | 18.71 | 0.00 | 7.9 | 91.7 | 0.4 | -0.92 | 1.52 | 0.73 | 0.79 | — | 41564 | 5385 | 16 | 0 | 12 | 0 | 0 | logfile |
✔ | 8FKJ | 29250 | 2024-03-19 | 2022-12-21 | 4.2 | 4.36 | 4.26 | 4.0 | 0.003 | 0.66 | 0.0 | 0.04 | 5.09 | 0.00 | 2.167 | 6.77 | 0.00 | 9.9 | 89.9 | 0.1 | -0.50 | 0.66 | 0.65 | — | 4.0 | 0.002 | 0.52 | 0.0 | 0.04 | 4.07 | 0.00 | 2.191 | 3.93 | 0.00 | 8.9 | 91.0 | 0.1 | 0.18 | 0.40 | 0.66 | 0.67 | — | 25001 | 5088 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HRG | 34972 | 2024-03-12 | 2022-12-15 | 4.5 | 4.83 | 4.51 | 4.6 | 0.003 | 0.70 | 0.0 | 0.05 | 12.33 | 0.00 | 2.127 | 11.61 | 0.00 | 7.0 | 92.7 | 0.3 | -0.76 | 0.85 | 0.83 | — | 4.6 | 0.003 | 0.59 | 0.0 | 0.04 | 12.40 | 0.00 | 2.181 | 12.33 | 0.00 | 7.0 | 92.7 | 0.3 | -0.42 | 1.50 | 0.85 | 0.84 | — | 61173 | 7854 | 21 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q97 | 18270 | 2024-03-11 | 2023-08-20 | 2.99 | 3.09 | 2.91 | 3.1 | 0.011 | 2.02 | 0.0 | 0.10 | 12.24 | 0.01 | 2.490 | 0.00 | 0.00 | 0.7 | 99.3 | 0.0 | -2.45 | 0.41 | 0.79 | 4.66 | 3.1 | 0.003 | 0.72 | 0.0 | 0.05 | 16.25 | 0.00 | 2.462 | 1.36 | 0.00 | 1.4 | 98.6 | 0.0 | -1.28 | 0.94 | 0.40 | 0.82 | 3.71 | 6642 | 426 | 6 | 0 | 0 | 0 | 3396 | logfile |
✔ | 8JUZ | 36667 | 2024-03-19 | 2023-06-27 | 4.29 | 4.11 | 4.43 | 3.9 | 0.003 | 0.72 | 0.0 | 0.04 | 15.18 | 0.00 | 2.131 | 9.33 | 0.07 | 6.6 | 93.3 | 0.1 | -0.25 | 0.66 | 0.49 | — | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.65 | 0.00 | 2.097 | 10.44 | 0.00 | 6.2 | 93.8 | 0.1 | -0.25 | 2.00 | 0.79 | 0.72 | — | 25274 | 3155 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7NJ7 | 12375 | 2024-03-20 | 2021-02-16 | 4.82 | 5.23 | — | 4.8 | 0.004 | 0.73 | 1.0 | 0.04 | 14.45 | 0.01 | 1.907 | 8.72 | 0.19 | 4.3 | 95.7 | 0.0 | -0.72 | 0.74 | 0.46 | — | 4.9 | 0.002 | 0.60 | 0.0 | 0.04 | 14.23 | 0.00 | 1.874 | 16.32 | 0.00 | 4.0 | 96.0 | 0.0 | -0.47 | 2.33 | 0.82 | 0.63 | — | 28818 | 1797 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7X6U | 33027 | 2024-03-24 | 2022-03-08 | 4.5 | 4.59 | 4.67 | 4.5 | 0.004 | 0.94 | 0.0 | 0.05 | 13.23 | 0.01 | 0.507 | 29.62 | 0.00 | 10.1 | 89.3 | 0.6 | -3.46 | 0.38 | 0.58 | — | 4.5 | 0.005 | 0.89 | 0.0 | 0.05 | 13.23 | 0.01 | 2.142 | 21.52 | 0.00 | 12.0 | 87.6 | 0.3 | -3.35 | 0.54 | 0.38 | 0.57 | — | 39324 | 5328 | 24 | 0 | 30 | 0 | 0 | logfile |
✔ | 8BG6 | 16024 | 2024-03-10 | 2022-10-27 | 4.11 | 4.22 | 3.92 | 4.2 | 0.006 | 0.94 | 0.0 | 0.06 | 12.58 | 0.01 | 2.348 | 6.39 | 0.00 | 6.9 | 93.1 | 0.0 | -0.90 | 0.73 | 0.80 | — | 4.1 | 0.004 | 0.71 | 0.0 | 0.05 | 12.67 | 0.00 | 2.336 | 7.21 | 0.00 | 6.4 | 93.6 | 0.0 | -0.10 | 0.95 | 0.75 | 0.84 | — | 3124 | 398 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8Ci2 | 16666 | 2024-03-18 | 2023-02-08 | 4.4 | 4.61 | 4.35 | 4.3 | 0.005 | 0.62 | 0.0 | 0.05 | 16.54 | 0.00 | 2.014 | 6.56 | 0.00 | 14.9 | 85.1 | 0.0 | -3.01 | 0.80 | 0.69 | — | 4.3 | 0.003 | 0.65 | 0.0 | 0.04 | 13.18 | 0.00 | 1.447 | 14.63 | 0.00 | 15.4 | 84.5 | 0.1 | -3.29 | 0.94 | 0.86 | 0.80 | — | 21547 | 1393 | 18 | 0 | 20 | 0 | 10298 | logfile |
✔ | 7YSR | 34081 | 2024-03-16 | 2022-08-12 | 4.3 | 4.43 | 4.10 | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.91 | 0.00 | 2.142 | 14.24 | 0.00 | 4.0 | 96.0 | 0.0 | 0.51 | 0.60 | 0.82 | — | 4.3 | 0.002 | 0.57 | 0.0 | 0.04 | 14.76 | 0.00 | 2.142 | 13.64 | 0.00 | 3.9 | 96.1 | 0.0 | 0.77 | 1.13 | 0.60 | 0.83 | — | 13456 | 1696 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6C5V | 7344 | 2024-03-15 | 2018-01-16 | 4.8 | 4.87 | — | 4.8 | 0.013 | 1.30 | 0.0 | 0.07 | 11.19 | 0.01 | 2.307 | 0.95 | 0.43 | 2.4 | 97.3 | 0.3 | 0.06 | 0.83 | 0.78 | — | 4.8 | 0.003 | 0.68 | 0.0 | 0.04 | 12.33 | 0.00 | 2.088 | 12.75 | 0.00 | 4.1 | 95.9 | 0.0 | 0.38 | 0.89 | 0.84 | 0.81 | — | 10649 | 1353 | 9 | 0 | 14 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2024-03-15 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.004 | 0.85 | 0.0 | 0.04 | 13.28 | 0.01 | 2.153 | 17.55 | 0.00 | 5.4 | 94.6 | 0.0 | 0.21 | 1.47 | 0.43 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |