The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8HZS | 35090 | 2024-03-10 | 2023-01-09 | 3.3 | 3.29 | 2.27 | 3.5 | 0.003 | 0.55 | 0.0 | 0.05 | 11.89 | 0.00 | 2.235 | 15.06 | 0.00 | 7.1 | 92.9 | 0.0 | -5.68 | 0.40 | 0.80 | 4.81 | 3.5 | 0.005 | 0.71 | 0.0 | 0.05 | 13.23 | 0.00 | 2.155 | 8.25 | 7.50 | 11.3 | 88.7 | 0.0 | -4.22 | 1.12 | 0.40 | 0.81 | 4.10 | 2376 | 348 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ADU | 15370 | 2024-03-10 | 2022-07-11 | 3.24 | 2.85 | 2.78 | 3.3 | 0.007 | 0.82 | 0.0 | 0.07 | 15.52 | 0.00 | 2.296 | 20.22 | 0.00 | 11.3 | 88.7 | 0.0 | -4.91 | 0.52 | 0.82 | 3.23 | 3.3 | 0.003 | 0.65 | 0.0 | 0.05 | 16.69 | 0.00 | 2.208 | 14.61 | 6.38 | 11.5 | 88.5 | 0.0 | -4.21 | 1.15 | 0.50 | 0.81 | 2.85 | 3460 | 495 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4D | 31708 | 2024-03-10 | 2021-08-12 | 3.5 | 3.38 | — | 4.0 | 0.003 | 0.54 | 0.0 | 0.05 | 11.89 | 0.00 | 2.234 | 14.44 | 0.00 | 7.1 | 92.9 | 0.0 | -5.68 | 0.41 | 0.80 | 4.67 | 4.1 | 0.005 | 0.76 | 0.0 | 0.05 | 13.19 | 0.00 | 2.166 | 9.90 | 7.92 | 10.7 | 89.3 | 0.0 | -4.21 | 1.19 | 0.43 | 0.81 | 4.12 | 2376 | 348 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VH7 | 21200 | 2024-03-10 | 2020-01-09 | 3.8 | 3.84 | — | 4.1 | 0.007 | 1.03 | 0.0 | 0.05 | 15.14 | 0.01 | 2.318 | 28.35 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.54 | 0.62 | 2.62 | 4.0 | 0.003 | 0.76 | 0.0 | 0.05 | 16.82 | 0.00 | 2.300 | 9.42 | 2.48 | 6.8 | 93.2 | 0.0 | -4.21 | 3.67 | 0.59 | 0.67 | 1.69 | 4878 | 642 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oLG | 16957 | 2024-03-10 | 2023-03-30 | 4.2 | 3.16 | 3.54 | 4.2 | 0.002 | 0.41 | 0.0 | 0.05 | 9.55 | 0.00 | 2.261 | 9.57 | 0.00 | 13.5 | 86.5 | 0.0 | -4.82 | 0.25 | 0.63 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.05 | 15.39 | 0.00 | 2.337 | 19.49 | 0.00 | 19.5 | 80.5 | 0.0 | -4.20 | 1.59 | 0.29 | 0.65 | — | 1490 | 195 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U13 | 26276 | 2024-03-10 | 2022-02-19 | 2.9 | 3.67 | — | 4.2 | 0.018 | 2.43 | 0.0 | 0.07 | 19.23 | 0.01 | 2.120 | 29.95 | 6.30 | 11.3 | 88.0 | 0.8 | -3.06 | 0.30 | 0.47 | 1.37 | 4.2 | 0.004 | 1.02 | 0.0 | 0.06 | 17.58 | 0.00 | 2.006 | 17.97 | 4.99 | 12.8 | 87.2 | 0.0 | -4.19 | 3.92 | 0.34 | 0.56 | 1.86 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6L1T | 0801 | 2024-03-11 | 2019-09-30 | 3.22 | 3.42 | — | 3.4 | 0.011 | 0.92 | 0.0 | 0.06 | 14.06 | 0.00 | 2.296 | 12.89 | 0.00 | 12.6 | 87.4 | 0.0 | -5.37 | 0.49 | 0.84 | 2.71 | 3.4 | 0.003 | 0.65 | 0.0 | 0.05 | 16.36 | 0.00 | 2.221 | 9.41 | 10.59 | 8.7 | 91.3 | 0.0 | -4.19 | 1.41 | 0.49 | 0.86 | 3.73 | 7010 | 1000 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SBD | 40305 | 2024-03-11 | 2023-04-03 | 3.2 | 3.26 | 4.77 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 12.98 | 0.00 | 2.203 | 18.83 | 5.97 | 6.2 | 93.8 | 0.0 | -4.19 | 0.70 | 0.71 | 2.96 | 3.7 | 0.004 | 0.70 | 0.0 | 0.05 | 15.82 | 0.00 | 1.893 | 26.32 | 4.66 | 13.3 | 86.7 | 0.0 | -4.19 | 1.07 | 0.72 | 0.74 | 3.13 | 8864 | 584 | 32 | 0 | 0 | 0 | 4280 | logfile |
✔ | 5A9Z | 6396 | 2024-03-27 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 28.05 | 0.03 | 0.000 | 199.42 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | 4.7 | 0.006 | 0.94 | 0.0 | 0.04 | 25.37 | 0.01 | 0.000 | 36.51 | 0.22 | 20.5 | 77.2 | 2.3 | -4.19 | 2.91 | 0.87 | 0.81 | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 7QiG | 13989 | 2024-03-10 | 2021-12-14 | 2.7 | 2.81 | — | 2.8 | 0.005 | 0.69 | 0.0 | 0.05 | 14.67 | 0.01 | 2.138 | 2.72 | 0.00 | 8.7 | 91.3 | 0.0 | -4.18 | 0.37 | 0.86 | 6.92 | 2.8 | 0.004 | 0.66 | 0.0 | 0.05 | 17.63 | 0.00 | 2.136 | 6.56 | 3.19 | 9.5 | 90.5 | 0.0 | -4.17 | 0.55 | 0.38 | 0.87 | 5.84 | 3213 | 396 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NSL | 12570 | 2024-03-11 | 2021-03-08 | 3.1 | 3.25 | 2.92 | 3.2 | 0.012 | 1.84 | 0.0 | 0.08 | 14.48 | 0.01 | 2.367 | 4.69 | 0.00 | 3.7 | 96.3 | 0.0 | -5.51 | 0.54 | 0.77 | 3.94 | 3.2 | 0.006 | 0.70 | 0.0 | 0.04 | 17.65 | 0.00 | 2.121 | 7.46 | 4.11 | 8.3 | 91.7 | 0.0 | -4.17 | 0.95 | 0.55 | 0.81 | 2.94 | 8323 | 595 | 7 | 0 | 0 | 0 | 4053 | logfile |
✔ | 7YNL | 33965 | 2024-03-10 | 2022-07-31 | 2.6 | 2.16 | 2.41 | 3.2 | 0.009 | 2.40 | 0.0 | 0.06 | 16.15 | 0.05 | 2.128 | 26.40 | 0.00 | 8.9 | 91.1 | 0.0 | -6.11 | 0.27 | 0.35 | 2.03 | 3.3 | 0.004 | 0.95 | 0.0 | 0.05 | 17.95 | 0.00 | 2.132 | 13.07 | 5.62 | 10.5 | 89.5 | 0.0 | -4.17 | 3.16 | 0.40 | 0.63 | 2.60 | 4080 | 464 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 8U1K | 41815 | 2024-03-10 | 2023-09-01 | 3.5 | 2.89 | 2.72 | 2.8 | 0.004 | 0.61 | 0.0 | 0.04 | 13.64 | 0.00 | 2.206 | 12.32 | 3.33 | 2.3 | 97.7 | 0.0 | -5.99 | 0.45 | 0.75 | 1.99 | 2.8 | 0.003 | 0.77 | 0.0 | 0.04 | 16.11 | 0.00 | 2.107 | 16.54 | 11.33 | 5.1 | 94.9 | 0.0 | -4.16 | 0.83 | 0.46 | 0.74 | 2.89 | 3060 | 450 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Z7Q | 11112 | 2024-03-17 | 2020-06-01 | 3.8 | 4.10 | 3.58 | 4.0 | 0.006 | 0.77 | 0.0 | 0.05 | 14.47 | 0.00 | 2.176 | 21.13 | 0.00 | 28.6 | 70.7 | 0.7 | -6.49 | 0.73 | 0.82 | 1.75 | 4.0 | 0.004 | 0.86 | 0.0 | 0.05 | 17.09 | 0.00 | 2.153 | 18.93 | 4.81 | 15.5 | 84.5 | 0.0 | -4.15 | 1.20 | 0.75 | 0.82 | 1.24 | 16665 | 2080 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P6E | 13227 | 2024-03-11 | 2021-07-15 | 3.4 | 3.40 | 3.47 | 4.1 | 0.009 | 0.96 | 0.0 | 0.06 | 8.26 | 0.01 | 2.358 | 3.99 | 0.00 | 5.9 | 94.1 | 0.0 | -4.80 | 0.54 | 0.80 | 4.38 | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 13.21 | 0.00 | 2.133 | 9.48 | 4.21 | 5.3 | 94.7 | 0.0 | -4.15 | 2.67 | 0.52 | 0.81 | 3.99 | 8090 | 1050 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TMC | 25995 | 2024-03-10 | 2022-01-19 | 3.25 | 3.24 | 2.95 | 4.2 | 0.005 | 0.72 | 0.0 | 0.07 | 18.02 | 0.01 | 2.152 | 13.78 | 0.00 | 9.5 | 90.5 | 0.0 | -4.08 | 0.21 | 0.31 | -0.39 | 3.5 | 0.003 | 0.84 | 0.0 | 0.06 | 15.57 | 0.01 | 2.182 | 16.12 | 5.29 | 9.5 | 90.5 | 0.0 | -4.13 | 1.95 | 0.34 | 0.75 | 3.02 | 3426 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6TNF | 10531 | 2024-03-14 | 2019-12-07 | 3.8 | 2.90 | 3.67 | 2.7 | 0.032 | 1.64 | 0.0 | 0.32 | 18.93 | 0.01 | 2.236 | 8.40 | 0.00 | 17.8 | 81.5 | 0.7 | -5.32 | 0.60 | 0.56 | — | 2.6 | 0.006 | 1.19 | 0.0 | 0.10 | 15.66 | 0.01 | 2.088 | 17.70 | 0.00 | 21.3 | 78.6 | 0.1 | -4.12 | 0.55 | 0.65 | 0.64 | — | 9559 | 2206 | 5 | 0 | 66 | 0 | 0 | logfile |
✔ | 7Q66 | 13853 | 2024-03-10 | 2021-11-05 | 2.79 | 2.87 | 2.63 | 2.9 | 0.021 | 1.42 | 0.0 | 0.11 | 12.58 | 0.01 | 2.277 | 13.59 | 6.52 | 0.0 | 100.0 | 0.0 | -4.18 | 0.63 | 0.84 | 3.82 | 2.9 | 0.005 | 0.76 | 0.0 | 0.04 | 16.32 | 0.00 | 2.195 | 14.14 | 12.65 | 0.8 | 99.2 | 0.0 | -4.12 | 0.64 | 0.62 | 0.88 | 4.35 | 4807 | 682 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ND4 | 0441 | 2024-03-12 | 2018-12-13 | 4.3 | 4.41 | — | 4.2 | 0.010 | 1.03 | 0.0 | 0.06 | 19.33 | 0.02 | 2.230 | 5.19 | 0.00 | 6.4 | 93.6 | 0.1 | -3.63 | 0.80 | 0.66 | — | 4.2 | 0.007 | 1.13 | 0.0 | 0.05 | 19.70 | 0.01 | 1.949 | 22.46 | 0.00 | 20.7 | 79.2 | 0.0 | -4.10 | 1.19 | 0.84 | 0.77 | — | 63993 | 9225 | 30 | 551 | 1306 | 0 | 0 | logfile |
✔ | 7Wi6 | 32526 | 2024-03-14 | 2022-01-03 | 3.71 | 4.33 | — | 4.2 | 0.009 | 1.02 | 0.0 | 0.06 | 15.69 | 0.01 | 2.290 | 5.63 | 1.54 | 14.5 | 85.5 | 0.0 | -6.21 | 0.76 | 0.78 | 1.96 | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 15.74 | 0.00 | 2.218 | 8.03 | 3.85 | 9.0 | 91.0 | 0.0 | -4.10 | 0.42 | 0.76 | 0.78 | 1.90 | 9696 | 1446 | 4 | 0 | 4 | 0 | 0 | logfile |