Table showing results for April 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6WKX	21812	2021-04-02	2020-04-17	4.2	4.31	—	4.2	0.006	0.59	0.0	0.04	15.11	0.00	2.298	2.52	0.00	0.0	100.0	0.0	-3.67	0.77	0.90	—	4.2	0.003	0.61	0.0	0.04	16.52	0.00	2.216	6.60	0.00	0.0	100.0	0.0	4.59	0.98	0.76	0.88	—	12915	1575	105	0	0	0	0	logfile
✔	6UET	20756	2021-04-01	2019-09-23	4.1	4.91	—	5.1	0.010	1.58	0.0	0.07	17.24	0.02	1.977	4.64	0.00	0.0	0.0	0.0	—	0.62	0.73	—	5.0	0.007	0.98	0.0	0.05	23.04	0.01	1.754	50.46	0.00	0.0	0.0	0.0	—	0.81	0.66	0.81	—	3869	0	1	119	1	0	1291	logfile
✔	6WL1	21815	2021-04-02	2020-04-17	4.0	4.02	—	4.0	0.007	0.81	0.0	0.05	7.85	0.00	2.413	3.17	0.00	0.0	100.0	0.0	-1.08	0.71	0.85	—	4.0	0.004	0.56	0.0	0.04	13.65	0.00	2.291	4.66	0.00	0.0	100.0	0.0	5.34	0.74	0.71	0.84	—	14612	1872	52	0	0	0	0	logfile
✔	6X64	22069	2021-04-02	2020-05-27	3.7	4.01	—	3.7	0.008	1.34	0.0	0.05	9.32	0.01	2.584	0.78	0.00	0.0	0.0	0.0	—	0.68	0.84	—	3.7	0.010	1.26	0.0	0.05	5.50	0.00	2.101	11.47	0.00	0.0	0.0	0.0	—	2.35	0.70	0.86	—	15840	0	36	0	3168	0	0	logfile
✔	6QYZ	4680	2021-04-01	2019-03-10	4.6	2.98	—	6.0	0.009	1.14	0.0	0.04	24.59	0.01	1.934	53.60	0.00	0.0	0.0	0.0	—	0.68	0.53	—	2.9	0.006	1.16	0.0	0.07	28.45	0.01	2.047	73.66	0.00	0.0	0.0	0.0	—	4.53	0.70	0.58	—	7300	0	5	345	0	0	0	logfile
✔	6oEF	20020	2021-04-05	2019-03-27	3.8	3.98	—	3.8	0.007	1.67	0.0	0.07	11.76	0.01	2.376	3.96	0.00	0.0	0.0	0.0	—	0.47	0.78	—	3.8	0.006	1.18	0.0	0.05	5.87	0.00	2.195	7.67	0.00	0.0	0.0	0.0	—	0.60	0.49	0.80	—	51240	0	14	0	10248	0	0	logfile
✔	6WR2	21875	2021-04-04	2020-04-29	2.88	3.14	—	3.1	0.014	0.88	0.0	0.06	12.47	0.01	2.203	4.10	0.00	0.1	99.9	0.0	-0.06	0.51	0.71	2.95	3.1	0.004	0.57	0.0	0.04	14.54	0.00	1.964	7.01	0.00	1.9	98.1	0.0	0.83	1.33	0.67	0.87	4.43	42671	2729	34	0	0	14	21361	logfile
✔	6PoS	20418	2021-04-05	2019-07-05	4.12	4.39	—	4.2	0.003	0.68	0.0	0.04	11.58	0.01	2.116	2.43	0.00	0.1	99.9	0.0	-2.43	0.80	0.77	—	4.2	0.003	0.54	0.0	0.04	13.03	0.00	1.856	9.56	0.00	3.4	96.6	0.0	0.20	1.95	0.82	0.80	—	53503	3425	20	0	13	0	26853	logfile
✔	6PP8	20422	2021-04-03	2019-07-05	4.12	4.53	—	4.3	0.003	0.72	0.0	0.04	12.10	0.01	2.116	2.90	0.00	0.2	99.8	0.0	-2.36	0.80	0.76	—	4.3	0.002	0.56	0.0	0.04	12.69	0.00	1.877	9.26	0.00	3.6	96.4	0.0	-0.42	1.07	0.82	0.80	—	32335	2078	13	0	13	0	16234	logfile
✔	6ZVJ	11458	2021-04-04	2020-07-24	3.8	3.00	—	3.1	0.010	1.34	7.0	0.07	17.39	0.01	1.731	5.46	1.39	0.2	99.8	0.0	-4.19	0.59	0.64	1.31	2.9	0.006	0.80	0.0	0.05	16.21	0.01	1.943	16.67	0.04	7.6	92.4	0.0	-1.51	1.35	0.67	0.76	1.38	115020	10127	55	1720	9	0	0	logfile
✔	6T90	10406	2021-04-02	2019-10-25	3.05	3.74	—	3.3	0.022	1.52	0.0	0.09	24.61	0.01	2.459	0.46	0.00	0.3	99.7	0.0	1.02	0.84	0.81	4.34	3.3	0.005	0.58	0.0	0.03	26.19	0.00	2.129	7.86	0.00	1.6	98.4	0.0	2.66	2.95	0.86	0.87	2.91	13031	903	19	282	9	0	0	logfile
✔	6T93	10408	2021-04-02	2019-10-25	3.49	4.10	—	3.7	0.014	1.15	0.0	0.06	27.23	0.01	2.435	0.73	0.00	0.3	99.7	0.0	0.78	0.87	0.85	2.94	3.7	0.004	0.63	0.0	0.03	27.44	0.00	2.115	10.81	0.00	2.3	97.7	0.0	2.69	2.07	0.87	0.87	1.96	12199	758	10	302	0	0	0	logfile
✔	6U1X	20614	2021-04-04	2019-08-17	3.0	3.37	3.11	3.3	0.004	0.55	0.0	0.04	10.38	0.00	1.986	3.73	0.11	0.3	99.7	0.0	-3.08	0.67	0.81	4.07	3.3	0.002	0.52	0.0	0.04	12.17	0.00	2.018	7.07	0.05	3.9	96.1	0.0	0.18	1.22	0.68	0.82	3.50	33529	2087	3	0	2	0	16768	logfile
✔	6MDo	9102	2021-04-04	2018-09-04	3.9	5.46	—	4.2	0.015	1.44	0.0	0.11	13.31	0.01	2.012	6.67	0.16	0.3	99.6	0.0	-3.28	0.79	0.68	0.38	4.2	0.003	0.64	0.0	0.08	12.58	0.00	1.954	14.66	0.00	6.4	93.6	0.0	-0.70	1.63	0.87	0.84	0.16	45373	2843	13	0	11	0	22858	logfile
✔	6P6F	20261	2021-04-06	2019-06-03	4.5	4.71	4.50	4.6	0.017	1.59	0.0	0.09	9.24	0.01	2.442	0.07	0.00	0.3	99.7	0.0	0.73	0.71	0.82	—	4.6	0.005	0.89	0.0	0.05	13.97	0.01	2.266	20.39	0.00	1.7	98.3	0.0	-0.40	1.34	0.73	0.80	—	159840	21060	120	0	0	0	0	logfile
✔	6W1X	21516	2021-04-02	2020-03-04	3.9	4.01	—	3.9	0.011	0.99	0.0	0.08	8.95	0.01	1.879	4.50	0.06	0.3	99.7	0.0	-0.99	0.75	0.72	0.89	3.9	0.006	0.72	0.0	0.04	13.22	0.01	2.048	13.32	0.00	5.9	94.1	0.0	-0.53	1.60	0.81	0.82	2.67	21735	2874	12	60	0	0	0	logfile
✔	6C9i	7436	2021-04-03	2018-01-26	3.09	3.21	—	3.2	0.029	1.48	0.0	0.12	9.22	0.01	2.417	0.75	0.00	0.3	99.6	0.1	2.36	0.79	0.85	4.97	3.2	0.002	0.41	0.0	0.04	13.78	0.00	2.262	5.92	0.00	0.0	100.0	0.0	3.75	2.43	0.73	0.89	3.83	23700	3087	24	0	0	0	0	logfile
✔	6Po3	20408	2021-04-05	2019-07-03	4.28	4.38	—	4.3	0.003	0.65	0.0	0.04	11.03	0.00	2.179	2.53	0.00	0.4	99.6	0.0	-1.68	0.75	0.74	—	4.3	0.003	0.59	0.0	0.04	13.29	0.00	1.887	11.54	0.04	5.6	94.4	0.0	-0.39	2.59	0.80	0.79	—	53225	3406	20	0	12	0	26724	logfile
✘	6T24	10366	2021-04-02	2019-10-07	3.7	3.44	3.63	3.6	0.019	1.73	0.0	0.09	12.41	0.01	1.162	2.67	0.00	0.5	99.5	0.0	0.74	0.68	0.80	2.64	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14910	1855	10	0	20	0	0	logfile
✔	6WXG	21957	2021-04-06	2020-05-10	3.3	3.40	3.26	3.4	0.004	0.75	0.0	0.05	12.89	0.00	1.633	3.76	1.72	0.5	99.5	0.0	-4.10	0.55	0.82	3.72	3.4	0.005	0.61	0.0	0.04	13.77	0.00	1.440	7.25	0.02	5.9	94.0	0.1	-1.18	1.91	0.56	0.85	3.76	200960	12763	57	0	72	0	99251	logfile

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