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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7A6A | 11668 | 2023-08-20 | 2020-08-25 | 1.15 | 1.13 | — | 1.2 | 0.018 | 1.70 | 24.0 | 0.16 | 14.68 | 0.01 | 1.857 | 3.78 | 3.03 | 1.2 | 98.8 | 0.0 | 2.45 | 0.47 | 0.61 | 9.02 | 1.2 | 0.003 | 0.59 | 0.0 | 0.04 | 15.31 | 0.00 | 2.163 | 2.66 | 1.82 | 1.8 | 98.2 | 0.0 | 4.55 | 0.44 | 0.69 | 0.82 | 8.90 | 41613 | 4152 | 72 | 0 | 32 | 4621 | 0 | logfile |
✔ | 8J5A | 35984 | 2023-08-23 | 2023-04-21 | 1.19 | 1.12 | 1.22 | 1.2 | 0.014 | 1.48 | 0.0 | 0.08 | 13.93 | 0.01 | 1.560 | 8.49 | 3.21 | 0.6 | 99.4 | 0.0 | 3.37 | 0.51 | 0.66 | 8.67 | 1.2 | 0.003 | 0.57 | 0.0 | 0.03 | 14.11 | 0.00 | 1.975 | 14.59 | 2.56 | 1.8 | 98.2 | 0.0 | 5.37 | 0.22 | 0.69 | 0.82 | 8.60 | 56208 | 4128 | 24 | 0 | 24 | 3384 | 17040 | logfile |
✔ | 7K3V | 22657 | 2023-08-24 | 2020-09-14 | 1.34 | 1.44 | — | 1.4 | 0.005 | 0.79 | 0.0 | 0.04 | 21.25 | 0.00 | 0.211 | 2.71 | 0.00 | 1.2 | 98.8 | 0.0 | 3.60 | 0.69 | 0.78 | 8.90 | 1.4 | 0.005 | 0.79 | 0.0 | 0.05 | 14.91 | 0.01 | 1.971 | 1.78 | 0.00 | 1.2 | 98.8 | 0.0 | 3.72 | 0.35 | 0.73 | 0.83 | 8.91 | 38406 | 4128 | 72 | 0 | 334 | 2672 | 0 | logfile |
✔ | 7K3W | 22658 | 2023-08-24 | 2020-09-14 | 1.36 | 1.48 | — | 1.5 | 0.005 | 0.76 | 0.0 | 0.04 | 20.58 | 0.00 | 1.934 | 3.30 | 0.00 | 1.8 | 98.2 | 0.0 | 3.35 | 0.73 | 0.80 | 9.05 | 1.5 | 0.004 | 0.67 | 0.0 | 0.04 | 14.88 | 0.00 | 2.032 | 2.26 | 0.00 | 1.8 | 98.2 | 0.0 | 4.02 | 0.24 | 0.75 | 0.82 | 9.16 | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✔ | 6Z9F | 11122 | 2023-08-20 | 2020-06-03 | 1.56 | 1.61 | 1.61 | 1.6 | 0.015 | 1.74 | 48.0 | 0.10 | 15.51 | 0.01 | 1.782 | 5.46 | 3.66 | 1.7 | 98.3 | 0.0 | 2.70 | 0.68 | 0.69 | 8.63 | 1.6 | 0.003 | 0.63 | 0.0 | 0.04 | 14.99 | 0.00 | 2.122 | 4.64 | 3.05 | 1.8 | 98.2 | 0.0 | 4.60 | 0.98 | 0.85 | 0.86 | 8.43 | 41020 | 4152 | 72 | 0 | 32 | 4172 | 0 | logfile |
✔ | 7UUR | 26801 | 2023-08-13 | 2022-04-28 | 1.67 | 1.76 | 1.67 | 1.8 | 0.061 | 2.45 | 3.0 | 0.98 | 14.57 | 0.01 | 1.674 | 7.19 | 0.44 | 2.5 | 97.2 | 0.2 | -0.89 | 0.76 | 0.87 | 7.87 | 1.8 | 0.007 | 2.49 | 0.0 | 0.07 | 14.70 | 0.01 | 1.611 | 10.87 | 0.29 | 2.1 | 97.9 | 0.0 | 0.19 | 0.27 | 0.77 | 0.88 | 7.79 | 13683 | 1668 | 12 | 0 | 18 | 603 | 0 | logfile |
✔ | 7EFC | 31083 | 2023-08-09 | 2021-03-21 | 1.7 | 1.76 | 1.76 | 1.9 | 0.032 | 3.16 | 16.0 | 0.09 | 15.03 | 0.02 | 0.001 | 2.15 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.75 | 0.84 | 6.42 | 1.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.60 | 0.00 | 1.907 | 5.77 | 0.54 | 2.5 | 97.5 | 0.0 | 0.68 | 0.91 | 0.80 | 0.85 | 5.94 | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✔ | 8CPV | 16787 | 2023-08-23 | 2023-03-03 | 1.76 | 1.73 | 1.80 | 1.7 | 0.006 | 0.91 | 0.0 | 0.07 | 14.41 | 0.01 | 2.182 | 2.58 | 0.00 | 1.0 | 99.0 | 0.0 | 2.15 | 0.78 | 0.84 | 8.93 | 1.7 | 0.002 | 0.49 | 0.0 | 0.03 | 14.99 | 0.00 | 2.274 | 3.00 | 0.00 | 1.8 | 98.2 | 0.0 | 4.87 | 1.19 | 0.81 | 0.87 | 8.51 | 35855 | 4152 | 72 | 0 | 38 | 1737 | 0 | logfile |
✔ | 8CPU | 16786 | 2023-08-23 | 2023-03-03 | 1.76 | 1.54 | 1.80 | 1.6 | 0.004 | 0.71 | 0.0 | 0.05 | 14.91 | 0.01 | 1.976 | 4.95 | 0.00 | 1.0 | 99.0 | 0.0 | 2.29 | 0.71 | 0.77 | 8.55 | 1.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.65 | 0.00 | 2.051 | 5.31 | 0.57 | 1.8 | 98.2 | 0.0 | 3.90 | 0.29 | 0.73 | 0.80 | 8.29 | 35823 | 4152 | 72 | 0 | 38 | 1705 | 0 | logfile |
✔ | 8CPX | 16789 | 2023-08-23 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.212 | 2.81 | 1.31 | 1.8 | 98.2 | 0.0 | 4.58 | 0.39 | 0.78 | 0.85 | 7.90 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✔ | 7EFD | 31084 | 2023-08-09 | 2021-03-21 | 1.77 | 1.78 | 1.82 | 1.9 | 0.033 | 3.16 | 12.0 | 0.09 | 15.47 | 0.02 | 0.001 | 1.61 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.74 | 0.82 | 5.75 | 1.9 | 0.004 | 0.74 | 0.0 | 0.05 | 14.91 | 0.00 | 1.834 | 7.38 | 0.00 | 3.4 | 96.0 | 0.6 | 0.90 | 0.55 | 0.80 | 0.84 | 6.49 | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✘ | 7ZG7 | 14705 | 2023-08-24 | 2022-04-02 | 1.77 | 1.79 | 1.79 | 1.8 | 0.004 | 0.74 | 0.0 | 0.04 | 14.44 | 0.01 | 1.952 | 3.06 | 0.00 | 1.8 | 98.2 | 0.0 | 3.49 | 0.77 | 0.86 | 9.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✔ | 8CPT | 16785 | 2023-08-23 | 2023-03-03 | 1.79 | 1.72 | 1.81 | 1.8 | 0.004 | 0.72 | 0.0 | 0.05 | 15.65 | 0.01 | 2.157 | 1.26 | 0.49 | 1.0 | 99.0 | 0.0 | 2.30 | 0.80 | 0.85 | 8.36 | 1.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.07 | 0.00 | 2.206 | 1.20 | 0.65 | 1.8 | 98.2 | 0.0 | 4.32 | 0.33 | 0.81 | 0.87 | 8.14 | 36024 | 4152 | 72 | 0 | 38 | 1906 | 0 | logfile |
✔ | 8CPW | 16788 | 2023-08-23 | 2023-03-03 | 1.79 | 1.64 | 1.78 | 1.7 | 0.005 | 0.84 | 0.0 | 0.06 | 14.35 | 0.01 | 2.180 | 3.39 | 0.63 | 1.0 | 99.0 | 0.0 | 2.13 | 0.77 | 0.83 | 8.34 | 1.6 | 0.004 | 0.71 | 0.0 | 0.04 | 14.75 | 0.00 | 2.215 | 4.05 | 0.41 | 1.2 | 98.8 | 0.0 | 3.93 | 0.22 | 0.77 | 0.85 | 7.73 | 36004 | 4152 | 72 | 0 | 38 | 1886 | 0 | logfile |
✔ | 5K12 | 8194 | 2023-08-13 | 2016-05-17 | 1.8 | 2.40 | — | 2.8 | 0.008 | 0.97 | 0.0 | 0.06 | 10.27 | 0.01 | 2.051 | 19.79 | 0.82 | 3.8 | 96.2 | 0.0 | -2.53 | 0.66 | 0.74 | 5.80 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 15.71 | 0.01 | 2.213 | 9.95 | 0.27 | 1.9 | 98.1 | 0.0 | 2.18 | 0.90 | 0.71 | 0.89 | 3.52 | 14856 | 1764 | 12 | 0 | 0 | 1086 | 0 | logfile |
✔ | 8CPM | 16783 | 2023-08-23 | 2023-03-03 | 1.81 | 1.57 | 1.84 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 15.21 | 0.01 | 1.916 | 7.77 | 0.00 | 1.0 | 99.0 | 0.0 | 2.32 | 0.70 | 0.75 | 7.56 | 1.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.38 | 0.00 | 2.043 | 7.22 | 0.11 | 2.3 | 97.7 | 0.0 | 4.30 | 0.37 | 0.71 | 0.77 | 7.46 | 36090 | 4152 | 72 | 0 | 38 | 1972 | 0 | logfile |
✔ | 8CPS | 16784 | 2023-08-23 | 2023-03-03 | 1.82 | 1.69 | 1.90 | 1.7 | 0.003 | 0.66 | 0.0 | 0.05 | 15.42 | 0.01 | 2.116 | 2.82 | 0.00 | 1.0 | 99.0 | 0.0 | 2.28 | 0.75 | 0.81 | 8.54 | 1.7 | 0.003 | 0.58 | 0.0 | 0.04 | 17.00 | 0.00 | 2.154 | 4.46 | 0.16 | 1.2 | 98.8 | 0.0 | 4.78 | 0.30 | 0.77 | 0.83 | 8.39 | 36034 | 4152 | 72 | 0 | 38 | 1916 | 0 | logfile |
✔ | 8CEU | 16613 | 2023-08-22 | 2023-02-02 | 1.83 | 1.74 | 1.82 | 1.7 | 0.009 | 1.57 | 16.0 | 0.11 | 13.99 | 0.03 | 1.830 | 0.53 | 0.65 | 2.7 | 97.2 | 0.0 | -1.11 | 0.79 | 0.85 | 6.99 | 1.7 | 0.005 | 0.94 | 16.0 | 0.05 | 14.24 | 0.01 | 1.796 | 4.66 | 0.33 | 1.9 | 98.0 | 0.0 | -0.28 | 0.77 | 0.84 | 0.89 | 6.85 | 92838 | 3076 | 79 | 2872 | 304 | 6830 | 0 | logfile |
✔ | 7QKY | 14057 | 2023-08-09 | 2021-12-19 | 1.86 | 2.10 | 1.91 | 2.0 | 0.011 | 1.75 | 3.0 | 0.09 | 12.76 | 0.01 | 2.522 | 1.04 | 0.61 | 4.7 | 95.3 | 0.0 | -3.08 | 0.33 | 0.75 | 8.32 | 2.0 | 0.004 | 0.74 | 0.0 | 0.05 | 16.56 | 0.00 | 2.028 | 5.37 | 0.61 | 6.2 | 93.8 | 0.0 | -3.22 | 1.00 | 0.39 | 0.84 | 7.47 | 5760 | 396 | 6 | 0 | 0 | 0 | 2862 | logfile |
✔ | 8CAM | 16530 | 2023-08-21 | 2023-01-24 | 1.86 | 1.57 | 1.83 | 1.7 | 0.010 | 1.53 | 0.0 | 0.11 | 14.23 | 0.03 | 1.821 | 0.54 | 0.27 | 3.0 | 96.8 | 0.1 | -1.28 | 0.64 | 0.76 | 6.57 | 1.6 | 0.005 | 0.88 | 0.0 | 0.05 | 14.56 | 0.01 | 1.757 | 7.16 | 1.42 | 2.3 | 97.6 | 0.0 | 0.01 | 0.34 | 0.73 | 0.82 | 6.32 | 86648 | 2767 | 65 | 2724 | 322 | 6113 | 0 | logfile |