Table showing results for July 2023

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6ZGL	11210	2023-07-08	2020-06-19	1.9	1.87	—	1.9	0.013	1.55	0.0	0.12	15.52	0.01	2.196	9.00	3.73	1.1	98.9	0.0	0.13	0.73	0.83	7.03	1.9	0.003	0.52	0.0	0.04	15.83	0.00	2.114	4.28	0.93	0.9	99.1	0.0	3.77	0.76	0.75	0.83	7.09	15760	1848	24	0	0	964	0	logfile
✔	6CVM	7770	2023-07-17	2018-03-28	1.9	2.49	1.94	2.3	0.012	0.92	0.0	0.06	10.16	0.01	2.053	3.70	0.00	2.7	97.3	0.0	-1.16	0.81	0.91	7.66	2.3	0.005	0.62	0.0	0.05	13.90	0.00	1.985	6.52	0.83	2.5	97.5	0.0	0.71	0.37	0.85	0.93	6.85	37062	4084	12	0	20	4194	0	logfile
✘	7UT6	26756	2023-07-08	2022-04-26	1.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16442	1998	12	0	8	415	0	logfile
✘	7UT7	26757	2023-07-08	2022-04-26	1.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16442	1998	12	0	8	415	0	logfile
✔	8CU8	26996	2023-07-16	2022-05-16	1.91	2.52	1.91	2.2	0.005	0.65	0.0	0.05	13.91	0.01	2.043	0.74	0.00	0.6	99.4	0.0	1.28	0.87	0.93	5.94	2.2	0.003	0.53	0.0	0.04	16.47	0.00	1.989	1.18	0.00	0.6	99.4	0.0	5.71	0.29	0.88	0.94	5.13	35271	4032	72	0	24	2271	0	logfile
✘	8DBX	27316	2023-07-08	2022-06-14	1.92	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16968	1998	12	0	10	914	0	logfile
✔	7N8o	24239	2023-07-04	2021-06-15	1.93	1.73	—	1.9	0.025	2.40	0.0	0.11	20.28	0.01	1.522	14.77	1.91	3.0	96.9	0.1	0.75	0.73	0.75	5.48	1.8	0.004	0.81	0.0	0.05	18.74	0.01	2.000	12.74	1.66	3.0	97.0	0.0	0.83	0.34	0.77	0.80	5.41	54656	5544	113	0	228	1236	0	logfile
✘	7Z15	14441	2023-07-19	2022-02-24	1.93	2.40	1.98	2.3	0.012	1.01	9.0	0.06	15.49	0.01	1.723	3.87	0.83	1.6	98.4	0.0	1.32	0.83	0.86	6.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	46112	2888	32	0	16	1171	22357	logfile
✘	7UK4	26574	2023-07-07	2022-03-31	1.94	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14487	1856	6	0	2	390	0	logfile
✔	7MBX	23749	2023-07-04	2021-04-01	1.95	2.56	1.94	2.4	0.005	0.88	1.0	0.06	11.68	0.01	2.287	2.16	0.45	1.5	98.5	0.0	-0.11	0.72	0.86	4.55	2.3	0.002	0.58	0.0	0.04	15.32	0.00	2.208	6.37	1.00	1.1	98.9	0.0	2.02	0.52	0.71	0.87	4.44	8433	1065	11	0	2	61	0	logfile
✘	7D1T	30547	2023-07-03	2020-09-15	1.95	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	52994	5312	108	0	196	2432	0	logfile
✔	7TFC	25869	2023-07-20	2022-01-06	1.96	2.13	—	2.1	0.002	0.53	0.0	0.04	17.59	0.00	1.913	6.13	1.74	4.1	95.9	0.0	0.82	0.43	0.60	5.65	2.1	0.002	0.54	0.0	0.04	17.24	0.00	1.861	17.13	0.82	4.3	95.5	0.1	0.90	1.37	0.74	0.84	6.18	50456	6356	42	0	28	0	140	logfile
✔	6YBQ	10771	2023-07-16	2020-03-17	1.96	2.06	—	2.0	0.039	1.58	0.0	0.05	15.05	0.01	1.550	5.79	0.00	2.7	97.3	0.0	-1.94	0.82	0.87	6.46	2.0	0.002	0.62	0.0	0.04	15.77	0.00	2.159	6.34	0.26	1.9	98.1	0.0	0.44	0.47	0.84	0.89	5.76	34092	4289	36	0	12	871	0	logfile
✘	7FiX	31605	2023-07-11	2021-08-01	1.97	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	73929	7137	96	0	444	348	0	logfile
✔	8E2E	27833	2023-07-12	2022-08-15	1.98	2.09	2.04	2.1	0.007	0.74	0.0	0.04	14.15	0.01	2.114	9.86	1.48	3.7	96.3	0.0	-0.81	0.69	0.86	6.40	2.1	0.004	0.60	0.0	0.04	14.44	0.00	2.034	8.11	1.48	1.4	98.6	0.0	2.35	0.31	0.69	0.86	6.30	26633	1654	4	0	0	377	13332	logfile
✘	7Z18	14444	2023-07-17	2022-02-24	1.98	2.40	2.04	2.3	0.008	0.94	0.0	0.06	15.02	0.01	1.726	3.36	1.19	1.9	98.1	0.0	1.45	0.79	0.82	5.67	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	37659	2432	18	0	10	2	18660	logfile
✔	7MiJ	23853	2023-07-11	2021-04-17	1.98	1.95	—	2.0	0.010	1.38	4.0	0.05	19.92	0.01	2.320	3.08	0.18	2.8	97.2	0.0	-3.96	0.75	0.81	5.48	2.0	0.002	0.51	0.0	0.04	18.05	0.00	2.213	4.43	0.92	2.6	97.4	0.0	1.38	1.08	0.75	0.80	4.57	23010	2556	12	0	38	328	0	logfile
✘	8B4o	15851	2023-07-04	2022-09-20	2.0	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6156	772	2	0	3	0	0	logfile
✔	8DBi	27285	2023-07-07	2022-06-14	2.0	2.07	2.03	2.0	0.012	1.17	0.0	0.06	18.16	0.04	1.910	5.92	1.15	4.3	95.7	0.0	0.57	0.73	0.87	6.48	2.0	0.003	1.62	0.0	0.05	16.44	0.00	1.844	5.01	1.91	3.9	96.1	0.0	0.83	0.89	0.74	0.91	6.36	14496	1854	18	0	30	12	0	logfile
✔	7YK5	33887	2023-07-18	2022-07-21	2.0	1.66	—	1.9	0.014	1.49	0.0	0.09	17.33	0.00	2.157	4.91	7.75	4.0	96.0	0.0	-2.45	0.38	0.48	6.60	1.9	0.004	0.74	0.0	0.05	16.52	0.01	2.340	1.95	1.52	2.7	97.3	0.0	0.05	0.46	0.81	0.84	6.66	39948	5064	36	0	8	0	0	logfile

• ← previous
• Page 2 of 500
• next →