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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZGL | 11210 | 2023-07-08 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.114 | 4.28 | 0.93 | 0.9 | 99.1 | 0.0 | 3.77 | 0.76 | 0.75 | 0.83 | 7.09 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 6CVM | 7770 | 2023-07-17 | 2018-03-28 | 1.9 | 2.49 | 1.94 | 2.3 | 0.012 | 0.92 | 0.0 | 0.06 | 10.16 | 0.01 | 2.053 | 3.70 | 0.00 | 2.7 | 97.3 | 0.0 | -1.16 | 0.81 | 0.91 | 7.66 | 2.3 | 0.005 | 0.62 | 0.0 | 0.05 | 13.90 | 0.00 | 1.985 | 6.52 | 0.83 | 2.5 | 97.5 | 0.0 | 0.71 | 0.37 | 0.85 | 0.93 | 6.85 | 37062 | 4084 | 12 | 0 | 20 | 4194 | 0 | logfile |
✘ | 7UT6 | 26756 | 2023-07-08 | 2022-04-26 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✘ | 7UT7 | 26757 | 2023-07-08 | 2022-04-26 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✔ | 8CU8 | 26996 | 2023-07-16 | 2022-05-16 | 1.91 | 2.52 | 1.91 | 2.2 | 0.005 | 0.65 | 0.0 | 0.05 | 13.91 | 0.01 | 2.043 | 0.74 | 0.00 | 0.6 | 99.4 | 0.0 | 1.28 | 0.87 | 0.93 | 5.94 | 2.2 | 0.003 | 0.53 | 0.0 | 0.04 | 16.47 | 0.00 | 1.989 | 1.18 | 0.00 | 0.6 | 99.4 | 0.0 | 5.71 | 0.29 | 0.88 | 0.94 | 5.13 | 35271 | 4032 | 72 | 0 | 24 | 2271 | 0 | logfile |
✘ | 8DBX | 27316 | 2023-07-08 | 2022-06-14 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16968 | 1998 | 12 | 0 | 10 | 914 | 0 | logfile |
✔ | 7N8o | 24239 | 2023-07-04 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.025 | 2.40 | 0.0 | 0.11 | 20.28 | 0.01 | 1.522 | 14.77 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.81 | 0.0 | 0.05 | 18.74 | 0.01 | 2.000 | 12.74 | 1.66 | 3.0 | 97.0 | 0.0 | 0.83 | 0.34 | 0.77 | 0.80 | 5.41 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✘ | 7Z15 | 14441 | 2023-07-19 | 2022-02-24 | 1.93 | 2.40 | 1.98 | 2.3 | 0.012 | 1.01 | 9.0 | 0.06 | 15.49 | 0.01 | 1.723 | 3.87 | 0.83 | 1.6 | 98.4 | 0.0 | 1.32 | 0.83 | 0.86 | 6.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46112 | 2888 | 32 | 0 | 16 | 1171 | 22357 | logfile |
✘ | 7UK4 | 26574 | 2023-07-07 | 2022-03-31 | 1.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14487 | 1856 | 6 | 0 | 2 | 390 | 0 | logfile |
✔ | 7MBX | 23749 | 2023-07-04 | 2021-04-01 | 1.95 | 2.56 | 1.94 | 2.4 | 0.005 | 0.88 | 1.0 | 0.06 | 11.68 | 0.01 | 2.287 | 2.16 | 0.45 | 1.5 | 98.5 | 0.0 | -0.11 | 0.72 | 0.86 | 4.55 | 2.3 | 0.002 | 0.58 | 0.0 | 0.04 | 15.32 | 0.00 | 2.208 | 6.37 | 1.00 | 1.1 | 98.9 | 0.0 | 2.02 | 0.52 | 0.71 | 0.87 | 4.44 | 8433 | 1065 | 11 | 0 | 2 | 61 | 0 | logfile |
✘ | 7D1T | 30547 | 2023-07-03 | 2020-09-15 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 7TFC | 25869 | 2023-07-20 | 2022-01-06 | 1.96 | 2.13 | — | 2.1 | 0.002 | 0.53 | 0.0 | 0.04 | 17.59 | 0.00 | 1.913 | 6.13 | 1.74 | 4.1 | 95.9 | 0.0 | 0.82 | 0.43 | 0.60 | 5.65 | 2.1 | 0.002 | 0.54 | 0.0 | 0.04 | 17.24 | 0.00 | 1.861 | 17.13 | 0.82 | 4.3 | 95.5 | 0.1 | 0.90 | 1.37 | 0.74 | 0.84 | 6.18 | 50456 | 6356 | 42 | 0 | 28 | 0 | 140 | logfile |
✔ | 6YBQ | 10771 | 2023-07-16 | 2020-03-17 | 1.96 | 2.06 | — | 2.0 | 0.039 | 1.58 | 0.0 | 0.05 | 15.05 | 0.01 | 1.550 | 5.79 | 0.00 | 2.7 | 97.3 | 0.0 | -1.94 | 0.82 | 0.87 | 6.46 | 2.0 | 0.002 | 0.62 | 0.0 | 0.04 | 15.77 | 0.00 | 2.159 | 6.34 | 0.26 | 1.9 | 98.1 | 0.0 | 0.44 | 0.47 | 0.84 | 0.89 | 5.76 | 34092 | 4289 | 36 | 0 | 12 | 871 | 0 | logfile |
✘ | 7FiX | 31605 | 2023-07-11 | 2021-08-01 | 1.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 73929 | 7137 | 96 | 0 | 444 | 348 | 0 | logfile |
✔ | 8E2E | 27833 | 2023-07-12 | 2022-08-15 | 1.98 | 2.09 | 2.04 | 2.1 | 0.007 | 0.74 | 0.0 | 0.04 | 14.15 | 0.01 | 2.114 | 9.86 | 1.48 | 3.7 | 96.3 | 0.0 | -0.81 | 0.69 | 0.86 | 6.40 | 2.1 | 0.004 | 0.60 | 0.0 | 0.04 | 14.44 | 0.00 | 2.034 | 8.11 | 1.48 | 1.4 | 98.6 | 0.0 | 2.35 | 0.31 | 0.69 | 0.86 | 6.30 | 26633 | 1654 | 4 | 0 | 0 | 377 | 13332 | logfile |
✘ | 7Z18 | 14444 | 2023-07-17 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.02 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✔ | 7MiJ | 23853 | 2023-07-11 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.002 | 0.51 | 0.0 | 0.04 | 18.05 | 0.00 | 2.213 | 4.43 | 0.92 | 2.6 | 97.4 | 0.0 | 1.38 | 1.08 | 0.75 | 0.80 | 4.57 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✘ | 8B4o | 15851 | 2023-07-04 | 2022-09-20 | 2.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6156 | 772 | 2 | 0 | 3 | 0 | 0 | logfile |
✔ | 8DBi | 27285 | 2023-07-07 | 2022-06-14 | 2.0 | 2.07 | 2.03 | 2.0 | 0.012 | 1.17 | 0.0 | 0.06 | 18.16 | 0.04 | 1.910 | 5.92 | 1.15 | 4.3 | 95.7 | 0.0 | 0.57 | 0.73 | 0.87 | 6.48 | 2.0 | 0.003 | 1.62 | 0.0 | 0.05 | 16.44 | 0.00 | 1.844 | 5.01 | 1.91 | 3.9 | 96.1 | 0.0 | 0.83 | 0.89 | 0.74 | 0.91 | 6.36 | 14496 | 1854 | 18 | 0 | 30 | 12 | 0 | logfile |
✔ | 7YK5 | 33887 | 2023-07-18 | 2022-07-21 | 2.0 | 1.66 | — | 1.9 | 0.014 | 1.49 | 0.0 | 0.09 | 17.33 | 0.00 | 2.157 | 4.91 | 7.75 | 4.0 | 96.0 | 0.0 | -2.45 | 0.38 | 0.48 | 6.60 | 1.9 | 0.004 | 0.74 | 0.0 | 0.05 | 16.52 | 0.01 | 2.340 | 1.95 | 1.52 | 2.7 | 97.3 | 0.0 | 0.05 | 0.46 | 0.81 | 0.84 | 6.66 | 39948 | 5064 | 36 | 0 | 8 | 0 | 0 | logfile |