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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WV3 | 32844 | 2023-02-25 | 2022-02-09 | 2.26 | 2.35 | — | 2.6 | 0.015 | 1.46 | 0.0 | 0.05 | 17.58 | 0.08 | 2.241 | 4.46 | 0.32 | 3.6 | 96.4 | 0.0 | -0.43 | 0.71 | 0.82 | 4.70 | 2.5 | 0.003 | 1.67 | 0.0 | 0.04 | 19.24 | 0.02 | 2.191 | 6.98 | 1.65 | 3.0 | 97.0 | 0.0 | -1.09 | 0.61 | 0.71 | 0.84 | 4.54 | 25386 | 2672 | 18 | 80 | 124 | 0 | 0 | logfile |
✔ | 7R06 | 14220 | 2023-02-23 | 2022-02-01 | 2.27 | 2.36 | 2.34 | 2.3 | 0.007 | 0.85 | 6.0 | 0.06 | 20.28 | 0.01 | 2.153 | 12.58 | 5.53 | 1.2 | 98.6 | 0.2 | 0.06 | 0.74 | 0.80 | 4.13 | 2.3 | 0.008 | 0.74 | 0.0 | 0.05 | 19.63 | 0.01 | 2.143 | 7.49 | 3.03 | 1.6 | 98.3 | 0.2 | 0.51 | 0.52 | 0.78 | 0.85 | 4.66 | 31320 | 3588 | 12 | 66 | 0 | 0 | 0 | logfile |
✔ | 7VLK | 32023 | 2023-02-26 | 2021-10-04 | 2.27 | 2.77 | — | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 17.01 | 0.00 | 2.195 | 6.32 | 2.51 | 2.0 | 98.0 | 0.0 | 1.38 | 0.76 | 0.84 | 3.20 | 2.6 | 0.003 | 0.56 | 0.0 | 0.04 | 17.19 | 0.00 | 2.164 | 6.61 | 3.05 | 2.5 | 97.5 | 0.0 | 1.53 | 0.26 | 0.77 | 0.86 | 3.20 | 28774 | 3698 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK6 | 14039 | 2023-02-16 | 2021-12-17 | 2.27 | 2.34 | 2.17 | 2.3 | 0.011 | 1.84 | 0.0 | 0.09 | 9.70 | 0.01 | 2.520 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.99 | 0.37 | 0.79 | 7.78 | 2.3 | 0.002 | 0.59 | 0.0 | 0.05 | 15.99 | 0.00 | 2.381 | 4.46 | 0.69 | 5.8 | 94.2 | 0.0 | -2.24 | 1.45 | 0.38 | 0.85 | 7.07 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7ZZ1 | 15031 | 2023-02-17 | 2022-05-25 | 2.27 | 2.59 | 2.22 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 18.21 | 0.01 | 2.159 | 3.90 | 2.68 | 2.6 | 97.4 | 0.0 | -1.05 | 0.91 | 0.90 | 4.22 | 2.1 | 0.003 | 0.60 | 0.0 | 0.04 | 17.94 | 0.00 | 2.116 | 8.71 | 2.87 | 2.6 | 97.4 | 0.0 | 1.09 | 1.10 | 0.91 | 0.90 | 4.07 | 4958 | 618 | 5 | 0 | 4 | 55 | 0 | logfile |
✔ | 7QUR | 14152 | 2023-02-26 | 2022-01-18 | 2.27 | 2.80 | — | 2.7 | 0.004 | 0.62 | 0.0 | 0.05 | 15.55 | 0.00 | 2.145 | 4.96 | 1.01 | 3.9 | 96.0 | 0.1 | -0.13 | 0.73 | 0.87 | 4.69 | 2.7 | 0.005 | 0.59 | 0.0 | 0.05 | 15.46 | 0.00 | 2.036 | 4.11 | 0.97 | 4.2 | 95.6 | 0.2 | -0.34 | 0.28 | 0.69 | 0.86 | 5.07 | 27174 | 3303 | 21 | 0 | 75 | 282 | 0 | logfile |
✔ | 7N00 | 24095 | 2023-02-17 | 2021-05-24 | 2.27 | 3.74 | 2.49 | 3.3 | 0.004 | 0.55 | 0.0 | 0.05 | 12.23 | 0.00 | 2.138 | 5.26 | 3.44 | 2.9 | 97.1 | 0.0 | -1.01 | 0.78 | 0.78 | 4.22 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.90 | 0.00 | 2.031 | 10.25 | 1.89 | 2.6 | 97.4 | 0.0 | -0.51 | 1.02 | 0.73 | 0.87 | 3.43 | 5817 | 806 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2023-02-16 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.002 | 0.36 | 0.0 | 0.03 | 15.29 | 0.00 | 2.294 | 4.44 | 0.71 | 0.0 | 100.0 | 0.0 | 6.53 | 0.31 | 0.81 | 0.83 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D1K | 27133 | 2023-02-22 | 2022-05-27 | 2.28 | 2.51 | 2.43 | 2.5 | 0.013 | 1.28 | 0.0 | 0.07 | 18.10 | 0.01 | 2.287 | 6.59 | 2.65 | 1.1 | 98.9 | 0.0 | 0.89 | 0.70 | 0.91 | 4.11 | 2.5 | 0.004 | 0.58 | 0.0 | 0.04 | 17.05 | 0.00 | 2.240 | 5.19 | 1.59 | 0.9 | 99.1 | 0.0 | 1.18 | 0.37 | 0.66 | 0.89 | 4.00 | 16305 | 1880 | 10 | 0 | 45 | 0 | 0 | logfile |
✔ | 7RXG | 24730 | 2023-02-20 | 2021-08-23 | 2.28 | 2.01 | — | 2.3 | 0.008 | 1.27 | 0.0 | 0.05 | 17.95 | 0.00 | 2.211 | 14.00 | 0.18 | 2.5 | 97.4 | 0.2 | -0.83 | 0.61 | 0.82 | 4.82 | 2.3 | 0.005 | 0.64 | 0.0 | 0.04 | 17.08 | 0.01 | 2.010 | 16.49 | 0.89 | 3.3 | 96.7 | 0.0 | 1.26 | 0.91 | 0.66 | 0.87 | 5.46 | 11380 | 1300 | 6 | 0 | 26 | 48 | 96 | logfile |
✔ | 7U5M | 26355 | 2023-02-19 | 2022-03-02 | 2.28 | 2.36 | 2.38 | 2.4 | 0.008 | 0.96 | 0.0 | 0.07 | 12.19 | 0.00 | 2.296 | 4.95 | 1.87 | 3.6 | 96.4 | 0.0 | -0.13 | 0.74 | 0.83 | 6.21 | 2.4 | 0.003 | 0.56 | 0.0 | 0.05 | 15.42 | 0.00 | 2.213 | 5.39 | 1.31 | 2.3 | 97.7 | 0.0 | -0.23 | 0.33 | 0.75 | 0.84 | 5.46 | 10627 | 1328 | 12 | 0 | 4 | 399 | 0 | logfile |
✔ | 7DYR | 30923 | 2023-02-20 | 2021-01-22 | 2.28 | 2.34 | — | 2.5 | 0.008 | 0.77 | 0.0 | 0.05 | 15.40 | 0.01 | 2.205 | 6.01 | 3.56 | 7.2 | 92.5 | 0.3 | 0.10 | 0.68 | 0.76 | 2.43 | 2.4 | 0.003 | 0.63 | 0.0 | 0.04 | 15.93 | 0.01 | 2.205 | 5.16 | 2.40 | 5.9 | 94.0 | 0.2 | 1.58 | 0.53 | 0.83 | 0.89 | 2.16 | 13326 | 1791 | 12 | 0 | 3 | 0 | 0 | logfile |
✘ | 7P13 | 13154 | 2023-02-21 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7VD9 | 31911 | 2023-02-22 | 2021-09-06 | 2.29 | 1.75 | 2.28 | 1.8 | 0.002 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.194 | 7.80 | 2.33 | 3.8 | 96.2 | 0.0 | 0.41 | 0.58 | 0.72 | 3.68 | 1.8 | 0.003 | 0.57 | 0.0 | 0.04 | 17.52 | 0.01 | 2.206 | 7.90 | 2.62 | 3.9 | 96.1 | 0.0 | 0.00 | 0.30 | 0.58 | 0.73 | 3.61 | 16426 | 1991 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7E26 | 30952 | 2023-02-20 | 2021-02-04 | 2.29 | 2.97 | — | 2.9 | 0.009 | 0.93 | 0.0 | 0.06 | 14.05 | 0.01 | 2.312 | 2.69 | 1.19 | 1.5 | 98.5 | 0.0 | -2.93 | 0.73 | 0.88 | 5.43 | 2.9 | 0.003 | 0.51 | 0.0 | 0.04 | 15.93 | 0.00 | 2.189 | 4.06 | 1.69 | 1.8 | 98.2 | 0.0 | 1.72 | 0.32 | 0.57 | 0.83 | 4.90 | 11360 | 1435 | 10 | 0 | 0 | 80 | 0 | logfile |
✔ | 7E27 | 30953 | 2023-02-20 | 2021-02-04 | 2.29 | 2.55 | — | 2.6 | 0.007 | 0.91 | 0.0 | 0.06 | 14.59 | 0.01 | 2.322 | 2.20 | 0.42 | 1.4 | 98.6 | 0.0 | -2.60 | 0.63 | 0.86 | 4.69 | 2.5 | 0.004 | 0.63 | 0.0 | 0.05 | 15.83 | 0.00 | 2.192 | 3.34 | 2.03 | 1.1 | 98.9 | 0.0 | 1.34 | 0.40 | 0.64 | 0.87 | 4.68 | 11475 | 1435 | 15 | 0 | 5 | 90 | 0 | logfile |
✔ | 6Li9 | 0903 | 2023-02-22 | 2019-12-10 | 2.3 | 2.38 | — | 2.4 | 0.007 | 1.00 | 0.0 | 0.07 | 13.94 | 0.01 | 2.265 | 2.26 | 0.21 | 5.0 | 95.0 | 0.0 | -4.31 | 0.63 | 0.75 | 4.03 | 2.4 | 0.003 | 0.69 | 0.0 | 0.05 | 16.15 | 0.00 | 2.104 | 6.48 | 1.85 | 4.1 | 95.9 | 0.0 | 0.17 | 1.69 | 0.72 | 0.84 | 3.68 | 17988 | 2164 | 22 | 0 | 26 | 246 | 0 | logfile |
✔ | 6KQ4 | 0750 | 2023-02-23 | 2019-08-16 | 2.3 | 3.29 | — | 3.0 | 0.007 | 0.65 | 0.0 | 0.06 | 13.31 | 0.00 | 2.167 | 3.58 | 0.37 | 4.3 | 95.7 | 0.0 | -3.29 | 0.85 | 0.87 | 4.30 | 2.9 | 0.005 | 0.74 | 1.0 | 0.13 | 15.73 | 0.00 | 2.009 | 4.52 | 0.44 | 3.8 | 96.2 | 0.0 | 1.19 | 0.79 | 0.84 | 0.89 | 4.03 | 62206 | 3936 | 24 | 0 | 24 | 0 | 31222 | logfile |
✔ | 8E3X | 27872 | 2023-02-18 | 2022-08-17 | 2.3 | 3.02 | 2.29 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.02 | 0.00 | 2.239 | 5.84 | 0.00 | 2.1 | 97.9 | 0.0 | 1.49 | 0.70 | 0.82 | 3.16 | 2.8 | 0.003 | 0.53 | 0.0 | 0.04 | 15.31 | 0.00 | 2.206 | 5.61 | 0.84 | 2.1 | 97.9 | 0.0 | 1.71 | 0.97 | 0.75 | 0.89 | 3.61 | 8979 | 1140 | 8 | 0 | 0 | 11 | 0 | logfile |
✔ | 8CXQ | 27067 | 2023-02-22 | 2022-05-22 | 2.3 | 3.31 | 2.77 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 10.31 | 0.00 | 2.008 | 5.61 | 0.22 | 3.9 | 96.0 | 0.1 | 0.30 | 0.78 | 0.80 | 2.66 | 3.1 | 0.003 | 0.51 | 0.0 | 0.04 | 12.17 | 0.00 | 1.891 | 6.73 | 0.66 | 4.5 | 95.5 | 0.0 | -0.06 | 0.39 | 0.73 | 0.75 | 2.47 | 56384 | 3666 | 6 | 0 | 0 | 0 | 27792 | logfile |