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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DQW | 27662 | 2024-03-25 | 2022-07-20 | 2.1 | 2.86 | 2.16 | 2.6 | 0.007 | 0.55 | 0.0 | 0.04 | 18.05 | 0.00 | 1.761 | 3.31 | 0.44 | 1.6 | 98.4 | 0.0 | 2.35 | 0.77 | 0.72 | 3.64 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 17.77 | 0.00 | 1.722 | 3.85 | 1.11 | 1.7 | 98.3 | 0.0 | 2.19 | 2.60 | 0.82 | 0.88 | 3.89 | 46565 | 2802 | 25 | 36 | 8 | 429 | 22936 | logfile |
✔ | 8FVW | 29494 | 2024-03-20 | 2023-01-19 | 2.1 | 2.22 | 2.16 | 2.2 | 0.004 | 0.61 | 0.0 | 0.04 | 14.75 | 0.00 | 1.974 | 8.97 | 0.07 | 1.9 | 98.1 | 0.0 | 0.42 | 0.72 | 0.88 | 4.32 | 2.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.97 | 0.00 | 1.945 | 7.95 | 0.78 | 2.4 | 97.6 | 0.0 | 0.46 | 0.36 | 0.73 | 0.89 | 4.25 | 26108 | 3165 | 17 | 52 | 5 | 225 | 0 | logfile |
✔ | 7SCA | 25031 | 2024-03-11 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 14.95 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.11 | 0.00 | 2.149 | 8.14 | 1.25 | 1.0 | 99.0 | 0.0 | 2.73 | 1.09 | 0.79 | 0.85 | 5.36 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 6LXV | 30007 | 2024-03-11 | 2020-02-12 | 2.1 | 2.18 | — | 2.2 | 0.025 | 1.66 | 0.0 | 0.12 | 16.07 | 0.01 | 2.196 | 2.01 | 2.81 | 3.9 | 95.9 | 0.1 | -1.79 | 0.78 | 0.91 | 6.69 | 2.2 | 0.003 | 0.59 | 0.0 | 0.05 | 16.34 | 0.00 | 2.163 | 3.80 | 0.75 | 2.5 | 97.5 | 0.0 | 0.86 | 0.92 | 0.79 | 0.91 | 6.27 | 54924 | 6448 | 24 | 0 | 16 | 2967 | 0 | logfile |
✔ | 7SC8 | 25029 | 2024-03-11 | 2021-09-27 | 2.1 | 2.19 | 2.13 | 1.9 | 0.008 | 1.12 | 10.0 | 0.07 | 14.65 | 0.01 | 2.102 | 5.20 | 0.38 | 1.0 | 99.0 | 0.0 | 2.13 | 0.82 | 0.79 | 4.35 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.89 | 0.00 | 2.068 | 8.83 | 1.29 | 1.1 | 98.9 | 0.0 | 2.98 | 0.36 | 0.86 | 0.86 | 4.14 | 56784 | 6836 | 116 | 0 | 54 | 2672 | 0 | logfile |
✔ | 6XZ7 | 10655 | 2024-03-19 | 2020-02-03 | 2.1 | 2.05 | 2.12 | 2.1 | 0.010 | 0.81 | 1.0 | 0.05 | 23.37 | 0.03 | 1.564 | 6.31 | 3.26 | 2.8 | 96.8 | 0.4 | -2.20 | 0.41 | 0.69 | 5.50 | 2.1 | 0.004 | 0.76 | 0.0 | 0.04 | 22.99 | 0.01 | 1.432 | 5.52 | 3.03 | 2.2 | 97.7 | 0.1 | 0.25 | 0.91 | 0.72 | 0.89 | 5.31 | 94915 | 3351 | 45 | 3169 | 179 | 528 | 0 | logfile |
✘ | 7SQ9 | 25380 | 2024-03-16 | 2021-11-04 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15810 | 1876 | 16 | 0 | 18 | 16 | 0 | logfile |
✔ | 7FEB | 31551 | 2024-03-19 | 2021-07-19 | 2.11 | 2.54 | — | 2.6 | 0.004 | 0.65 | 0.0 | 0.05 | 15.91 | 0.01 | 2.211 | 11.24 | 0.30 | 1.5 | 98.5 | 0.0 | 0.07 | 0.75 | 0.82 | 3.11 | 2.6 | 0.004 | 0.62 | 0.0 | 0.04 | 16.39 | 0.01 | 2.123 | 8.89 | 2.98 | 1.5 | 98.5 | 0.0 | 0.63 | 1.94 | 0.75 | 0.85 | 3.16 | 24075 | 3024 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NK7 | 12432 | 2024-03-25 | 2021-02-17 | 2.11 | 2.13 | — | 2.1 | 0.006 | 0.63 | 0.0 | 0.05 | 16.92 | 0.00 | 2.121 | 3.56 | 0.88 | 1.8 | 98.1 | 0.1 | 1.07 | 0.80 | 0.89 | 5.91 | 2.1 | 0.004 | 0.56 | 0.0 | 0.04 | 16.65 | 0.00 | 1.815 | 3.60 | 0.50 | 1.8 | 98.1 | 0.1 | 1.34 | 0.21 | 0.81 | 0.91 | 5.77 | 45644 | 2954 | 20 | 0 | 11 | 459 | 22525 | logfile |
✔ | 7RZV | 24779 | 2024-03-10 | 2021-08-27 | 2.11 | 2.24 | — | 2.0 | 0.005 | 0.35 | 0.0 | 0.03 | 14.68 | 0.00 | 2.348 | 5.44 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.79 | 0.80 | 2.21 | 2.0 | 0.004 | 0.36 | 0.0 | 0.03 | 16.04 | 0.00 | 2.237 | 5.05 | 1.35 | 0.0 | 100.0 | 0.0 | 5.77 | 0.88 | 0.83 | 0.83 | 1.74 | 2562 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BCW | 15970 | 2024-03-18 | 2022-10-17 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22313 | 2029 | 22 | 0 | 114 | 517 | 0 | logfile |
✔ | 8FNV | 29327 | 2024-03-16 | 2022-12-28 | 2.11 | 2.24 | 2.15 | 2.2 | 0.007 | 1.36 | 12.0 | 0.07 | 18.52 | 0.02 | 2.014 | 8.59 | 3.84 | 5.7 | 93.5 | 0.8 | 0.03 | 0.71 | 0.82 | 3.84 | 2.2 | 0.003 | 0.62 | 0.0 | 0.04 | 17.95 | 0.00 | 2.066 | 9.09 | 1.40 | 5.2 | 94.3 | 0.5 | 1.22 | 0.47 | 0.74 | 0.87 | 4.17 | 74928 | 9237 | 24 | 0 | 12 | 0 | 0 | logfile |
✘ | 7ZYY | 15028 | 2024-03-22 | 2022-05-25 | 2.12 | 2.40 | 2.14 | 2.1 | 0.007 | 0.89 | 0.0 | 0.05 | 17.50 | 0.00 | 2.008 | 4.42 | 1.19 | 2.4 | 97.6 | 0.0 | -0.65 | 0.91 | 0.89 | 4.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 33924 | 4224 | 12 | 0 | 28 | 324 | 0 | logfile |
✔ | 7XY9 | 33514 | 2024-03-15 | 2022-06-01 | 2.12 | 2.29 | 2.22 | 2.3 | 0.002 | 0.54 | 0.0 | 0.05 | 17.43 | 0.00 | 1.988 | 4.59 | 1.67 | 4.0 | 96.0 | 0.0 | 0.43 | 0.78 | 0.88 | 5.01 | 2.3 | 0.002 | 0.57 | 0.0 | 0.05 | 17.26 | 0.00 | 1.946 | 5.12 | 1.39 | 4.4 | 95.6 | 0.0 | 0.19 | 0.85 | 0.75 | 0.87 | 5.26 | 10962 | 1376 | 12 | 0 | 12 | 574 | 0 | logfile |
✔ | 8PV7 | 17956 | 2024-03-03 | 2023-07-17 | 2.12 | 2.36 | — | 2.2 | 0.007 | 0.79 | 0.0 | 0.04 | 21.72 | 0.02 | 2.127 | 2.55 | 0.91 | 1.3 | 98.7 | 0.0 | 0.70 | 0.89 | 0.88 | 5.14 | 2.2 | 0.005 | 0.67 | 0.0 | 0.04 | 21.62 | 0.01 | 1.949 | 5.21 | 1.29 | 1.3 | 98.7 | 0.0 | 1.78 | 0.20 | 0.90 | 0.90 | 4.91 | 157262 | 10514 | 68 | 3435 | 10 | 3 | 0 | logfile |
✔ | 8D1L | 27134 | 2024-03-17 | 2022-05-27 | 2.12 | 2.70 | 2.13 | 2.6 | 0.005 | 0.94 | 0.0 | 0.04 | 17.69 | 0.00 | 2.222 | 4.07 | 1.18 | 1.6 | 98.4 | 0.0 | 1.75 | 0.72 | 0.89 | 4.78 | 2.6 | 0.003 | 0.52 | 0.0 | 0.04 | 16.72 | 0.00 | 2.264 | 4.83 | 0.88 | 1.5 | 98.5 | 0.0 | 1.75 | 0.39 | 0.63 | 0.87 | 4.50 | 16306 | 1880 | 10 | 0 | 46 | 0 | 0 | logfile |
✔ | 7JFo | 22308 | 2024-03-23 | 2020-07-17 | 2.13 | 2.12 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 12.07 | 0.01 | 2.198 | 6.71 | 1.23 | 3.9 | 96.1 | 0.0 | -0.96 | 0.72 | 0.78 | 6.96 | 2.1 | 0.003 | 0.62 | 0.0 | 0.04 | 14.53 | 0.00 | 2.215 | 7.17 | 0.67 | 2.8 | 97.2 | 0.0 | 1.29 | 0.78 | 0.70 | 0.81 | 5.79 | 38958 | 4832 | 40 | 0 | 0 | 1198 | 0 | logfile |
✔ | 7ZYV | 15027 | 2024-03-17 | 2022-05-25 | 2.13 | 2.84 | 2.17 | 2.6 | 0.007 | 0.70 | 0.0 | 0.05 | 20.58 | 0.01 | 1.927 | 11.83 | 2.20 | 3.9 | 96.1 | 0.0 | 0.99 | 0.78 | 0.90 | 3.60 | 2.6 | 0.006 | 0.74 | 0.0 | 0.05 | 17.43 | 0.01 | 2.195 | 3.76 | 1.53 | 3.4 | 96.6 | 0.0 | 1.15 | 0.38 | 0.78 | 0.92 | 3.26 | 16452 | 1946 | 29 | 0 | 32 | 0 | 0 | logfile |
✔ | 7TF7 | 25864 | 2024-03-24 | 2022-01-06 | 2.13 | 2.24 | — | 2.2 | 0.004 | 0.61 | 0.0 | 0.04 | 15.42 | 0.00 | 2.187 | 5.57 | 1.43 | 2.5 | 97.4 | 0.1 | 1.01 | 0.47 | 0.70 | 5.40 | 2.3 | 0.003 | 0.54 | 0.0 | 0.04 | 16.33 | 0.00 | 2.215 | 4.25 | 2.42 | 3.7 | 96.3 | 0.0 | 1.23 | 0.40 | 0.71 | 0.87 | 5.87 | 39976 | 4980 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E41 | 27876 | 2024-03-12 | 2022-08-17 | 2.13 | 2.86 | 2.57 | 2.6 | 0.005 | 0.36 | 1.0 | 0.02 | 23.37 | 0.02 | 1.983 | 1.89 | 0.85 | 5.2 | 94.8 | 0.0 | 0.82 | 0.73 | 0.90 | 5.26 | 2.6 | 0.005 | 0.59 | 1.0 | 0.04 | 23.21 | 0.01 | 1.982 | 3.23 | 1.48 | 5.9 | 94.0 | 0.1 | 0.21 | 0.23 | 0.73 | 0.91 | 5.29 | 115744 | 1186 | 12 | 3016 | 1 | 0 | 41833 | logfile |