Table showing results for April 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7JRG	22445	2021-04-03	2020-08-12	3.2	3.47	3.19	3.3	0.009	0.85	0.0	0.23	14.73	0.00	2.045	10.03	0.09	6.8	93.1	0.1	0.25	0.79	0.88	2.78	3.3	0.003	0.58	0.0	0.04	14.50	0.00	2.121	8.05	0.00	5.1	94.9	0.0	1.07	0.34	0.78	0.88	2.18	32930	3983	30	0	37	0	0	logfile
✔	6o0Y	0584	2021-04-02	2019-02-17	3.37	4.01	—	3.7	0.005	0.74	0.0	0.05	16.71	0.01	2.272	2.52	0.37	5.5	94.5	0.0	-4.11	0.85	0.88	2.93	3.7	0.004	0.55	0.0	0.04	16.19	0.00	2.072	5.83	0.00	5.1	94.9	0.0	-0.01	0.34	0.85	0.88	2.65	11828	1146	5	150	0	0	0	logfile
✔	7K0N	22604	2021-04-02	2020-09-04	3.1	3.55	—	3.5	0.005	0.74	0.0	0.04	14.62	0.00	2.227	6.22	0.32	2.5	97.5	0.0	0.72	0.73	0.82	2.88	3.5	0.002	0.49	0.0	0.04	14.08	0.00	2.239	5.17	0.00	2.4	97.6	0.0	1.02	0.34	0.73	0.83	2.85	18470	2340	14	0	18	0	0	logfile
✔	7CRP	30455	2021-04-03	2020-08-14	3.2	3.29	—	3.3	0.006	0.74	0.0	0.04	27.13	0.01	1.478	6.60	0.96	8.0	91.8	0.1	-5.47	0.73	0.83	3.50	3.3	0.004	0.63	0.0	0.04	26.95	0.01	2.199	5.22	0.00	6.4	93.6	0.0	-3.21	0.34	0.76	0.87	3.16	14833	1002	11	336	4	0	0	logfile
✔	7K0M	22602	2021-04-02	2020-09-04	2.9	3.38	—	3.3	0.005	0.74	0.0	0.04	13.68	0.00	2.218	4.67	0.00	2.3	97.7	0.0	1.05	0.62	0.79	3.49	3.3	0.002	0.49	0.0	0.04	13.09	0.00	2.223	4.73	0.00	2.3	97.7	0.0	1.20	0.35	0.63	0.80	3.34	18578	2342	14	0	16	0	0	logfile
✔	6YY0	11001	2021-04-05	2020-05-04	3.23	3.34	3.07	3.3	0.006	0.69	0.0	0.04	15.27	0.00	1.847	8.05	0.00	8.4	91.6	0.0	-0.84	0.72	0.84	2.97	3.3	0.004	0.57	0.0	0.04	15.04	0.00	1.772	6.19	0.00	5.0	95.0	0.0	0.32	0.35	0.73	0.85	2.80	61162	3926	25	0	11	17	30826	logfile
✔	6AZ3	7025	2021-04-05	2017-09-09	2.5	3.08	—	3.1	0.011	1.28	0.0	0.06	16.52	0.03	1.349	4.52	0.96	6.4	93.4	0.2	-4.53	0.54	0.78	5.15	3.1	0.006	0.85	0.0	0.05	17.17	0.01	1.968	8.68	2.94	6.6	93.3	0.1	-1.50	0.35	0.55	0.80	3.87	126561	6390	91	3507	44	1019	0	logfile
✔	6U3Q	20630	2021-04-14	2019-08-22	2.46	3.11	—	2.8	0.009	0.61	0.0	0.04	12.86	0.00	2.189	3.45	4.15	3.1	96.9	0.0	-1.52	0.80	0.92	5.73	2.8	0.003	0.50	0.0	0.04	14.28	0.00	2.179	4.68	2.18	2.2	97.8	0.0	-0.32	0.35	0.80	0.92	5.02	248280	31140	60	0	0	0	0	logfile
✔	6W8X	21579	2021-04-03	2020-03-21	3.4	3.77	—	3.6	0.005	0.59	0.0	0.05	11.44	0.00	2.038	8.22	0.00	4.3	95.7	0.0	-2.19	0.59	0.85	2.04	3.6	0.005	0.59	0.0	0.05	11.51	0.00	2.054	9.52	0.00	4.2	95.8	0.0	-0.42	0.35	0.62	0.88	2.39	29766	4356	33	0	0	0	0	logfile
✔	6K7N	9942	2021-04-01	2019-06-07	2.84	2.94	2.68	2.9	0.030	1.54	0.0	0.18	15.53	0.01	2.046	6.84	0.44	8.0	91.9	0.1	-3.74	0.61	0.85	3.92	2.9	0.004	0.82	0.0	0.06	14.67	0.01	2.034	14.36	0.00	6.7	93.2	0.1	-1.96	0.35	0.68	0.88	3.55	10544	1308	4	0	8	0	0	logfile
✔	6UZA	20954	2021-04-03	2019-11-14	3.08	3.47	—	3.4	0.052	1.85	0.0	0.34	15.95	0.01	2.338	2.59	0.00	4.1	95.9	0.0	-3.92	0.70	0.87	3.55	3.4	0.008	1.15	0.0	0.11	16.19	0.01	2.337	15.77	0.00	4.1	95.9	0.0	-2.72	0.35	0.68	0.88	3.37	23284	2936	8	0	20	0	0	logfile
✔	6U48	20638	2021-04-03	2019-08-23	2.87	2.54	2.82	2.8	0.007	0.94	3.0	0.05	14.18	0.02	1.331	3.47	0.74	6.2	93.3	0.4	-3.65	0.49	0.75	3.87	2.8	0.003	0.66	3.0	0.04	14.20	0.01	2.061	7.84	0.04	5.9	93.9	0.2	-1.55	0.36	0.52	0.74	3.42	90950	3374	32	3016	4	0	0	logfile
✔	6TQF	10550	2021-04-01	2019-12-16	3.5	3.81	—	3.7	0.009	0.98	0.0	0.06	15.82	0.01	2.092	2.95	0.09	5.2	94.8	0.0	-6.53	0.74	0.90	2.73	3.7	0.003	0.63	0.0	0.04	13.87	0.00	1.978	2.53	0.00	4.0	96.0	0.0	-3.54	0.36	0.74	0.90	3.17	10426	1268	4	0	14	0	0	logfile
✔	6V93	21115	2021-04-02	2019-12-13	3.1	3.37	—	3.3	0.006	0.74	0.0	0.75	12.61	0.00	2.117	5.76	0.00	7.0	93.0	0.0	-2.84	0.78	0.84	3.32	3.3	0.007	1.29	0.0	0.24	13.61	0.00	2.091	6.96	0.06	7.3	92.6	0.0	-0.20	0.36	0.80	0.85	3.21	18105	2198	14	26	4	220	0	logfile
✔	6CVM	7770	2021-04-04	2018-03-28	1.9	2.49	1.94	2.3	0.012	0.93	0.0	0.07	10.11	0.01	2.053	3.57	0.00	2.7	97.3	0.0	-1.16	0.81	0.91	7.66	2.3	0.003	0.59	0.0	0.04	13.78	0.00	2.034	6.03	0.83	2.5	97.5	0.0	0.67	0.36	0.85	0.93	6.94	37062	4084	12	0	20	4194	0	logfile
✔	6UZ8	20953	2021-04-03	2019-11-14	2.84	3.21	—	3.1	0.052	1.87	4.0	0.34	14.13	0.02	2.298	2.20	0.17	4.3	95.7	0.0	-3.69	0.72	0.84	3.29	3.1	0.009	1.62	8.0	0.12	14.28	0.01	1.770	18.12	0.00	4.1	95.9	0.0	-2.28	0.37	0.77	0.87	3.21	23320	2936	8	0	16	0	0	logfile
✔	6K7i	9934	2021-04-01	2019-06-07	3.22	3.34	3.11	3.3	0.031	1.58	0.0	0.18	15.17	0.01	2.253	6.02	0.78	8.9	90.7	0.4	-4.41	0.60	0.84	3.87	3.3	0.004	0.80	0.0	0.06	14.96	0.00	2.199	12.89	0.00	7.4	92.5	0.2	-2.19	0.37	0.69	0.87	3.57	10590	1310	4	0	7	0	0	logfile
✔	6X16	21990	2021-04-01	2020-05-18	3.39	3.34	—	3.4	0.005	0.98	0.0	0.05	15.14	0.01	2.322	3.97	0.31	4.8	95.2	0.0	-3.86	0.40	0.73	1.79	3.4	0.003	0.58	0.0	0.04	13.95	0.00	2.183	8.45	0.10	3.3	96.7	0.0	0.78	0.37	0.43	0.75	1.71	9438	1248	6	0	6	0	0	logfile
✔	6ZG7	11195	2021-04-02	2020-06-18	3.49	3.18	3.39	3.4	0.006	0.64	0.0	0.04	14.31	0.00	2.002	9.98	0.00	4.8	95.2	0.0	-0.07	0.54	0.78	2.53	3.4	0.004	0.56	0.0	0.04	14.40	0.00	1.905	8.13	0.00	4.0	95.9	0.1	0.76	0.37	0.54	0.79	2.40	15587	1048	11	0	0	0	7852	logfile
✔	7B0S	11970	2021-04-02	2020-11-21	3.6	3.73	—	3.6	0.008	0.81	0.0	0.04	16.09	0.00	2.214	7.15	0.35	6.2	93.8	0.0	-0.53	0.83	0.86	2.66	3.6	0.002	0.54	0.0	0.04	15.82	0.00	2.257	4.68	0.00	3.1	96.9	0.0	1.32	0.38	0.82	0.84	2.28	21076	2572	8	0	12	0	0	logfile

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