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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PBW | 13307 | 2023-04-21 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.009 | 0.99 | 0.0 | 0.05 | 12.27 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.004 | 0.76 | 0.0 | 0.04 | 14.47 | 0.01 | 2.150 | 7.99 | 0.00 | 0.0 | 100.0 | 0.0 | 4.46 | 0.28 | 0.77 | 0.90 | 7.32 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |
✔ | 7W4G | 32304 | 2023-04-25 | 2021-11-27 | 3.1 | 3.14 | — | 3.1 | 0.007 | 0.82 | 0.0 | 0.04 | 18.13 | 0.01 | 2.149 | 7.57 | 0.24 | 3.7 | 96.2 | 0.1 | 1.04 | 0.79 | 0.88 | 3.09 | 3.1 | 0.002 | 0.53 | 0.0 | 0.04 | 17.13 | 0.00 | 2.115 | 7.19 | 0.22 | 3.9 | 96.1 | 0.0 | 1.29 | 0.28 | 0.79 | 0.88 | 2.98 | 68260 | 8270 | 68 | 0 | 47 | 0 | 0 | logfile |
✔ | 7UTN | 26782 | 2023-04-20 | 2022-04-27 | 2.74 | 3.33 | 2.90 | 3.1 | 0.007 | 0.68 | 0.0 | 0.04 | 18.57 | 0.00 | 2.080 | 8.58 | 0.00 | 1.8 | 98.2 | 0.0 | 0.01 | 0.86 | 0.88 | 4.65 | 3.1 | 0.003 | 0.56 | 0.0 | 0.03 | 18.52 | 0.00 | 2.158 | 8.00 | 0.58 | 1.8 | 98.2 | 0.0 | 0.95 | 0.28 | 0.82 | 0.85 | 3.82 | 8003 | 397 | 4 | 228 | 0 | 0 | 0 | logfile |
✔ | 7ZRK | 14917 | 2023-04-22 | 2022-05-04 | 3.1 | 2.68 | 3.17 | 3.0 | 0.005 | 0.77 | 0.0 | 0.05 | 15.75 | 0.01 | 2.251 | 6.83 | 0.00 | 4.5 | 95.5 | 0.0 | -0.25 | 0.63 | 0.81 | 2.05 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 16.08 | 0.00 | 2.173 | 9.19 | 0.00 | 3.6 | 96.4 | 0.0 | 0.99 | 0.28 | 0.62 | 0.83 | 2.15 | 11050 | 1450 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7UKH | 26581 | 2023-04-22 | 2022-04-01 | 2.33 | 2.55 | 2.38 | 2.5 | 0.004 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.035 | 7.98 | 1.80 | 2.9 | 97.1 | 0.0 | 0.99 | 0.77 | 0.85 | 3.75 | 2.5 | 0.003 | 0.54 | 0.0 | 0.04 | 18.19 | 0.00 | 2.189 | 7.26 | 1.41 | 2.6 | 97.4 | 0.0 | 1.49 | 0.29 | 0.75 | 0.86 | 3.77 | 12340 | 1536 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 8EAS | 27984 | 2023-04-27 | 2022-08-29 | 2.6 | 2.77 | 2.60 | 2.8 | 0.006 | 0.64 | 0.0 | 0.04 | 12.91 | 0.00 | 2.044 | 9.00 | 0.00 | 1.4 | 98.6 | 0.0 | 1.65 | 0.67 | 0.83 | 4.09 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 15.42 | 0.00 | 2.172 | 9.43 | 1.04 | 1.1 | 98.9 | 0.0 | 2.33 | 0.29 | 0.66 | 0.84 | 3.39 | 24802 | 3241 | 18 | 0 | 39 | 0 | 0 | logfile |
✔ | 7M1Q | 23618 | 2023-04-23 | 2021-03-14 | 2.92 | 3.52 | — | 3.3 | 0.004 | 0.97 | 0.0 | 0.05 | 13.85 | 0.00 | 2.049 | 8.31 | 0.08 | 7.6 | 92.2 | 0.2 | 0.03 | 0.72 | 0.83 | 2.79 | 3.2 | 0.003 | 0.74 | 0.0 | 0.04 | 14.40 | 0.00 | 2.012 | 8.58 | 0.91 | 7.9 | 92.0 | 0.1 | 0.22 | 0.29 | 0.72 | 0.85 | 2.44 | 13780 | 1911 | 4 | 0 | 16 | 0 | 0 | logfile |
✔ | 7X7A | 33040 | 2023-04-21 | 2022-03-09 | 3.2 | 3.65 | 3.23 | 3.6 | 0.002 | 0.49 | 0.0 | 0.04 | 15.25 | 0.00 | 2.134 | 8.04 | 0.00 | 5.1 | 94.8 | 0.2 | -0.24 | 0.78 | 0.82 | 3.29 | 3.6 | 0.003 | 0.53 | 0.0 | 0.04 | 16.40 | 0.00 | 2.090 | 8.85 | 0.10 | 5.7 | 94.1 | 0.2 | 0.14 | 0.29 | 0.78 | 0.84 | 2.54 | 10278 | 1241 | 3 | 33 | 4 | 0 | 0 | logfile |
✔ | 7BC6 | 12140 | 2023-04-20 | 2020-12-18 | 3.2 | 3.48 | 3.20 | 3.4 | 0.008 | 0.90 | 0.0 | 0.05 | 13.65 | 0.01 | 2.145 | 9.76 | 0.92 | 7.0 | 93.0 | 0.0 | -1.77 | 0.64 | 0.85 | 2.92 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 15.20 | 0.00 | 2.200 | 8.93 | 0.46 | 4.2 | 95.8 | 0.0 | 0.13 | 0.29 | 0.59 | 0.84 | 1.99 | 4178 | 549 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W2K | 32263 | 2023-04-23 | 2021-11-24 | 2.9 | 3.00 | — | 3.0 | 0.007 | 0.77 | 2.0 | 0.04 | 17.96 | 0.01 | 2.125 | 9.55 | 1.51 | 3.6 | 96.3 | 0.1 | 1.00 | 0.80 | 0.88 | 3.00 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 17.48 | 0.00 | 2.170 | 8.41 | 2.04 | 3.6 | 96.3 | 0.0 | 0.96 | 0.29 | 0.79 | 0.88 | 2.90 | 66522 | 8140 | 66 | 0 | 37 | 0 | 0 | logfile |
✔ | 8ASW | 15623 | 2023-04-27 | 2022-08-21 | 3.96 | 3.82 | 4.00 | 3.5 | 0.005 | 0.75 | 0.0 | 0.04 | 18.49 | 0.00 | 2.061 | 19.48 | 0.71 | 10.5 | 89.2 | 0.2 | -2.15 | 0.87 | 0.78 | 1.38 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 18.51 | 0.00 | 2.130 | 15.65 | 0.20 | 8.7 | 91.2 | 0.2 | -1.86 | 0.29 | 0.87 | 0.78 | 1.22 | 24781 | 2897 | 6 | 73 | 2 | 0 | 0 | logfile |
✔ | 8E57 | 27905 | 2023-04-24 | 2022-08-20 | 2.8 | 2.97 | 2.82 | 3.0 | 0.005 | 0.60 | 0.0 | 0.12 | 15.51 | 0.00 | 2.214 | 5.98 | 0.66 | 4.2 | 95.8 | 0.0 | 0.54 | 0.61 | 0.83 | 2.94 | 3.0 | 0.002 | 0.62 | 0.0 | 0.06 | 16.02 | 0.00 | 2.208 | 6.53 | 1.56 | 4.6 | 95.4 | 0.0 | 0.27 | 0.29 | 0.63 | 0.84 | 2.71 | 18449 | 2247 | 12 | 0 | 28 | 0 | 0 | logfile |
✔ | 7MU1 | 24001 | 2023-04-27 | 2021-05-14 | 3.3 | 3.25 | — | 3.2 | 0.006 | 0.65 | 0.0 | 0.04 | 13.49 | 0.00 | 2.078 | 13.28 | 0.43 | 3.4 | 96.6 | 0.0 | 0.09 | 0.86 | 0.89 | 3.34 | 3.2 | 0.002 | 0.53 | 0.0 | 0.04 | 15.01 | 0.00 | 2.317 | 7.87 | 0.00 | 4.3 | 95.7 | 0.0 | 1.05 | 0.29 | 0.86 | 0.91 | 3.05 | 130320 | 15840 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7W1V | 32257 | 2023-04-25 | 2021-11-20 | 3.0 | 3.04 | — | 3.0 | 0.008 | 0.81 | 1.0 | 0.04 | 18.73 | 0.01 | 2.140 | 8.28 | 1.69 | 3.1 | 96.9 | 0.0 | 1.09 | 0.78 | 0.87 | 3.16 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 17.92 | 0.00 | 2.143 | 7.74 | 2.51 | 3.4 | 96.5 | 0.0 | 1.09 | 0.29 | 0.78 | 0.87 | 3.11 | 68209 | 8270 | 67 | 0 | 46 | 0 | 0 | logfile |
✔ | 8DL7 | 27498 | 2023-04-20 | 2022-07-07 | 2.7 | 3.86 | 2.72 | 3.3 | 0.005 | 0.84 | 3.0 | 0.05 | 16.37 | 0.00 | 2.238 | 7.20 | 2.90 | 4.5 | 95.3 | 0.2 | 1.47 | 0.75 | 0.84 | 2.18 | 3.3 | 0.003 | 0.79 | 2.0 | 0.04 | 15.96 | 0.00 | 2.171 | 5.78 | 1.71 | 3.6 | 96.3 | 0.1 | 1.75 | 0.29 | 0.75 | 0.84 | 2.46 | 6586 | 907 | 6 | 0 | 6 | 1 | 0 | logfile |
✔ | 7WBL | 32405 | 2023-04-22 | 2021-12-17 | 3.4 | 3.46 | — | 3.5 | 0.004 | 0.60 | 0.0 | 0.04 | 15.35 | 0.00 | 2.158 | 6.95 | 0.72 | 3.6 | 96.1 | 0.4 | 0.52 | 0.67 | 0.77 | 2.33 | 3.5 | 0.002 | 0.53 | 0.0 | 0.04 | 16.73 | 0.00 | 2.187 | 6.00 | 0.29 | 3.0 | 96.8 | 0.1 | 1.25 | 0.29 | 0.67 | 0.79 | 1.67 | 6484 | 791 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7SK8 | 25176 | 2023-04-22 | 2021-10-19 | 3.3 | 3.55 | — | 3.5 | 0.009 | 0.88 | 0.0 | 0.22 | 14.30 | 0.00 | 2.265 | 2.62 | 0.00 | 5.2 | 94.8 | 0.0 | -0.08 | 0.70 | 0.83 | 3.30 | 3.5 | 0.003 | 0.48 | 0.0 | 0.04 | 15.06 | 0.00 | 2.153 | 4.37 | 0.00 | 5.2 | 94.8 | 0.0 | 0.17 | 0.29 | 0.69 | 0.83 | 3.37 | 13389 | 835 | 7 | 0 | 8 | 0 | 6513 | logfile |
✔ | 8GU6 | 34270 | 2023-04-23 | 2022-09-10 | 3.1 | 3.33 | 3.14 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 17.38 | 0.00 | 2.091 | 13.08 | 0.14 | 5.6 | 94.4 | 0.0 | -0.34 | 0.70 | 0.79 | 2.37 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 17.28 | 0.00 | 2.132 | 12.23 | 0.36 | 6.0 | 94.0 | 0.0 | -0.12 | 0.29 | 0.69 | 0.79 | 2.29 | 15261 | 1870 | 5 | 50 | 4 | 0 | 0 | logfile |
✔ | 7XKP | 33259 | 2023-04-26 | 2022-04-20 | 3.0 | 3.46 | 3.07 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 13.19 | 0.00 | 2.089 | 3.88 | 0.00 | 2.4 | 97.6 | 0.0 | 1.63 | 0.84 | 0.90 | 3.37 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 14.77 | 0.00 | 2.003 | 4.64 | 0.90 | 2.7 | 97.2 | 0.0 | 1.43 | 0.29 | 0.84 | 0.91 | 3.17 | 24105 | 3128 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 7ZDM | 14658 | 2023-04-24 | 2022-03-29 | 3.44 | 3.47 | — | 3.4 | 0.006 | 0.85 | 1.0 | 1.03 | 16.68 | 0.01 | 2.195 | 5.31 | 0.35 | 3.8 | 96.2 | 0.0 | -0.65 | 0.92 | 0.89 | 2.24 | 3.4 | 0.009 | 1.58 | 0.0 | 0.31 | 16.78 | 0.00 | 1.551 | 8.96 | 0.40 | 4.1 | 95.8 | 0.0 | 0.60 | 0.29 | 0.91 | 0.88 | 2.22 | 67086 | 8227 | 64 | 0 | 32 | 0 | 0 | logfile |