The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DKE | 27488 | 2022-12-11 | 2022-07-05 | 3.18 | 3.43 | 3.12 | 3.4 | 0.003 | 0.74 | 2.0 | 0.05 | 14.40 | 0.01 | 2.179 | 7.47 | 0.83 | 6.2 | 93.8 | 0.0 | -0.95 | 0.57 | 0.85 | 3.68 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 15.56 | 0.00 | 2.228 | 5.98 | 0.62 | 6.0 | 94.0 | 0.0 | 0.20 | 0.29 | 0.57 | 0.86 | 3.28 | 4369 | 553 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EAS | 27984 | 2022-12-15 | 2022-08-29 | 2.6 | 2.77 | 2.60 | 2.8 | 0.006 | 0.64 | 0.0 | 0.04 | 12.91 | 0.00 | 2.044 | 9.09 | 0.00 | 1.4 | 98.6 | 0.0 | 1.65 | 0.67 | 0.83 | 4.09 | 2.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.45 | 0.00 | 2.189 | 9.04 | 1.20 | 1.2 | 98.8 | 0.0 | 2.29 | 0.29 | 0.66 | 0.84 | 3.41 | 24802 | 3241 | 18 | 0 | 39 | 0 | 0 | logfile |
✔ | 7E8D | 31015 | 2022-12-13 | 2021-03-01 | 2.8 | 3.12 | — | 3.0 | 0.011 | 0.72 | 0.0 | 0.05 | 28.84 | 0.00 | 2.070 | 7.70 | 1.95 | 5.1 | 94.8 | 0.1 | -0.71 | 0.83 | 0.87 | 3.74 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 29.13 | 0.00 | 2.106 | 8.89 | 1.22 | 3.6 | 96.4 | 0.0 | 1.02 | 0.29 | 0.85 | 0.90 | 3.21 | 14852 | 983 | 11 | 344 | 4 | 0 | 0 | logfile |
✔ | 7TL1 | 25983 | 2022-12-15 | 2022-01-18 | 3.5 | 3.79 | 3.47 | 3.6 | 0.003 | 0.66 | 0.0 | 0.05 | 11.12 | 0.01 | 2.302 | 3.36 | 0.00 | 3.6 | 96.4 | 0.0 | -0.64 | 0.85 | 0.83 | 2.56 | 3.6 | 0.004 | 0.52 | 0.0 | 0.04 | 12.51 | 0.00 | 2.145 | 6.60 | 0.07 | 3.9 | 96.1 | 0.0 | 0.31 | 0.29 | 0.85 | 0.85 | 2.47 | 25109 | 3138 | 11 | 0 | 38 | 0 | 0 | logfile |
✔ | 7V7N | 31775 | 2022-12-15 | 2021-08-21 | 2.9 | 3.77 | — | 3.2 | 0.004 | 0.55 | 0.0 | 0.05 | 13.44 | 0.00 | 2.171 | 6.70 | 0.00 | 5.4 | 94.4 | 0.1 | 0.11 | 0.89 | 0.87 | 2.63 | 3.2 | 0.004 | 0.58 | 0.0 | 0.05 | 14.77 | 0.00 | 2.191 | 7.72 | 1.33 | 4.5 | 95.3 | 0.1 | 0.25 | 0.29 | 0.89 | 0.87 | 2.07 | 25430 | 3101 | 42 | 0 | 85 | 0 | 0 | logfile |
✔ | 7MR2 | 23954 | 2022-12-13 | 2021-05-07 | 4.3 | 4.72 | — | 4.5 | 0.003 | 0.75 | 0.0 | 0.05 | 14.96 | 0.01 | 2.257 | 5.86 | 0.00 | 5.1 | 94.9 | 0.0 | -1.32 | 0.90 | 0.84 | — | 4.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.98 | 0.00 | 2.153 | 10.06 | 0.00 | 4.6 | 95.4 | 0.0 | 0.28 | 0.29 | 0.90 | 0.84 | — | 16671 | 2075 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZRi | 14915 | 2022-12-12 | 2022-05-04 | 3.5 | 3.62 | 3.50 | 3.6 | 0.006 | 0.92 | 0.0 | 0.05 | 15.75 | 0.01 | 2.196 | 7.56 | 0.00 | 4.6 | 95.4 | 0.0 | -1.22 | 0.70 | 0.82 | 1.47 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 16.09 | 0.00 | 2.156 | 10.41 | 0.18 | 3.8 | 96.2 | 0.0 | 0.29 | 0.29 | 0.70 | 0.83 | 1.33 | 11014 | 1450 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 7WBL | 32405 | 2022-12-13 | 2021-12-17 | 3.4 | 3.46 | — | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 15.30 | 0.00 | 2.158 | 6.95 | 0.72 | 3.6 | 96.1 | 0.4 | 0.52 | 0.67 | 0.77 | 2.33 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 16.78 | 0.00 | 2.174 | 5.76 | 0.14 | 3.0 | 96.8 | 0.1 | 1.14 | 0.29 | 0.67 | 0.80 | 1.70 | 6484 | 791 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7FGG | 31580 | 2022-12-21 | 2021-07-27 | 2.19 | 2.26 | — | 2.2 | 0.010 | 1.05 | 0.0 | 0.06 | 17.46 | 0.01 | 2.005 | 2.76 | 2.08 | 3.8 | 96.2 | 0.0 | -0.12 | 0.76 | 0.80 | 5.14 | 2.2 | 0.003 | 0.68 | 0.0 | 0.05 | 17.68 | 0.00 | 1.960 | 2.01 | 1.71 | 3.4 | 96.6 | 0.0 | 0.48 | 0.29 | 0.80 | 0.89 | 5.23 | 45132 | 5424 | 36 | 0 | 36 | 1764 | 0 | logfile |
✔ | 7ZRE | 14912 | 2022-12-12 | 2022-05-04 | 3.4 | 2.77 | 3.31 | 3.2 | 0.006 | 0.93 | 1.0 | 0.05 | 15.97 | 0.01 | 2.231 | 7.40 | 0.00 | 4.3 | 95.7 | 0.0 | -0.86 | 0.61 | 0.78 | 2.49 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.23 | 0.00 | 2.132 | 11.63 | 0.35 | 3.9 | 96.1 | 0.0 | 0.53 | 0.29 | 0.62 | 0.81 | 2.17 | 10996 | 1447 | 6 | 0 | 11 | 0 | 0 | logfile |
✔ | 7V7F | 31769 | 2022-12-15 | 2021-08-21 | 2.9 | 3.82 | — | 3.2 | 0.004 | 0.56 | 0.0 | 0.05 | 13.42 | 0.00 | 2.061 | 7.34 | 0.00 | 5.1 | 94.7 | 0.1 | -0.13 | 0.88 | 0.86 | 2.44 | 3.2 | 0.005 | 0.58 | 0.0 | 0.05 | 14.94 | 0.00 | 2.108 | 8.30 | 1.51 | 5.7 | 94.2 | 0.1 | -0.14 | 0.29 | 0.89 | 0.87 | 2.25 | 25503 | 3114 | 42 | 0 | 84 | 0 | 0 | logfile |
✔ | 7EDG | 31070 | 2022-12-15 | 2021-03-16 | 3.2 | 3.75 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.05 | 13.86 | 0.00 | 1.362 | 6.96 | 0.45 | 6.7 | 92.9 | 0.4 | -1.02 | 0.79 | 0.80 | 2.17 | 3.7 | 0.005 | 0.62 | 0.0 | 0.05 | 15.08 | 0.00 | 2.159 | 6.87 | 0.38 | 7.5 | 92.4 | 0.1 | -0.88 | 0.29 | 0.80 | 0.83 | 1.97 | 24715 | 3023 | 36 | 0 | 79 | 0 | 0 | logfile |
✔ | 7VD9 | 31911 | 2022-12-13 | 2021-09-06 | 2.29 | 1.75 | 2.28 | 1.8 | 0.002 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.194 | 8.15 | 2.33 | 3.8 | 96.2 | 0.0 | 0.41 | 0.58 | 0.72 | 3.68 | 1.8 | 0.004 | 0.67 | 0.0 | 0.05 | 17.73 | 0.01 | 2.197 | 9.18 | 3.08 | 5.1 | 94.9 | 0.0 | -0.55 | 0.29 | 0.59 | 0.74 | 3.69 | 16426 | 1991 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7o6E | 12738 | 2022-12-19 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.61 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | 1.6 | 0.003 | 0.46 | 0.0 | 0.03 | 18.16 | 0.00 | 2.221 | 3.78 | 0.29 | 0.5 | 99.5 | 0.0 | 4.53 | 0.29 | 0.88 | 0.89 | 5.11 | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✔ | 7UL5 | 26592 | 2022-12-11 | 2022-04-03 | 3.1 | 3.32 | 3.08 | 3.3 | 0.004 | 0.64 | 0.0 | 0.04 | 11.76 | 0.01 | 2.404 | 3.68 | 0.00 | 3.1 | 96.9 | 0.0 | -1.07 | 0.64 | 0.85 | 3.67 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 13.36 | 0.00 | 2.338 | 1.47 | 0.37 | 1.4 | 98.6 | 0.0 | 2.78 | 0.29 | 0.65 | 0.87 | 3.19 | 2773 | 371 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZRK | 14917 | 2022-12-12 | 2022-05-04 | 3.1 | 2.68 | 3.17 | 3.0 | 0.005 | 0.77 | 0.0 | 0.05 | 15.75 | 0.01 | 2.251 | 6.83 | 0.00 | 4.5 | 95.5 | 0.0 | -0.25 | 0.63 | 0.81 | 2.05 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.16 | 0.00 | 2.164 | 9.36 | 0.18 | 4.0 | 96.0 | 0.0 | 0.80 | 0.29 | 0.63 | 0.83 | 2.32 | 11050 | 1450 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7XKP | 33259 | 2022-12-15 | 2022-04-20 | 3.0 | 3.46 | 3.07 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 13.19 | 0.00 | 2.089 | 3.94 | 0.00 | 2.4 | 97.6 | 0.0 | 1.63 | 0.84 | 0.90 | 3.37 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 14.83 | 0.00 | 1.996 | 4.74 | 0.97 | 2.7 | 97.3 | 0.0 | 1.48 | 0.29 | 0.84 | 0.91 | 3.04 | 24105 | 3128 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 7SK8 | 25176 | 2022-12-13 | 2021-10-19 | 3.3 | 3.55 | — | 3.5 | 0.008 | 1.03 | 0.0 | 0.22 | 14.91 | 0.00 | 2.265 | 2.62 | 0.00 | 5.2 | 94.8 | 0.0 | -0.08 | 0.70 | 0.83 | 3.30 | 3.5 | 0.003 | 0.50 | 0.0 | 0.04 | 15.29 | 0.00 | 2.120 | 4.66 | 0.00 | 4.9 | 95.1 | 0.0 | 0.18 | 0.30 | 0.69 | 0.83 | 3.35 | 13389 | 835 | 7 | 0 | 8 | 0 | 6513 | logfile |
✔ | 7MKJ | 23897 | 2022-12-16 | 2021-04-23 | 2.9 | 3.41 | 3.07 | 3.3 | 0.007 | 0.67 | 0.0 | 0.05 | 16.29 | 0.00 | 2.195 | 5.54 | 3.83 | 5.4 | 94.6 | 0.0 | -1.98 | 0.69 | 0.80 | 3.35 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 17.54 | 0.00 | 2.096 | 7.32 | 2.71 | 4.7 | 95.3 | 0.0 | -0.35 | 0.30 | 0.72 | 0.83 | 2.65 | 32007 | 3754 | 12 | 118 | 6 | 0 | 0 | logfile |
✔ | 7UZS | 26917 | 2022-12-12 | 2022-05-09 | 2.2 | 2.05 | 2.19 | 2.0 | 0.004 | 0.72 | 0.0 | 0.05 | 17.96 | 0.01 | 2.217 | 2.70 | 1.79 | 1.1 | 98.9 | 0.0 | 1.09 | 0.64 | 0.87 | 6.60 | 2.0 | 0.003 | 0.56 | 0.0 | 0.04 | 17.93 | 0.00 | 2.035 | 4.15 | 1.43 | 2.0 | 98.0 | 0.0 | 1.16 | 0.30 | 0.64 | 0.87 | 6.29 | 10550 | 658 | 1 | 0 | 0 | 193 | 5183 | logfile |