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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7V8C | 31798 | 2023-04-27 | 2021-08-22 | 3.4 | 3.98 | — | 3.8 | 0.005 | 0.67 | 0.0 | 0.05 | 13.51 | 0.00 | 2.102 | 10.89 | 0.00 | 6.8 | 93.0 | 0.2 | -0.58 | 0.82 | 0.75 | 1.60 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 15.00 | 0.00 | 2.049 | 10.39 | 0.22 | 6.5 | 93.4 | 0.2 | -0.53 | 1.62 | 0.83 | 0.79 | 1.59 | 25197 | 3088 | 35 | 0 | 75 | 0 | 0 | logfile |
✔ | 7V77 | 31761 | 2023-04-27 | 2021-08-21 | 3.3 | 3.76 | — | 3.6 | 0.005 | 0.65 | 0.0 | 0.05 | 13.41 | 0.00 | 2.077 | 8.53 | 0.00 | 6.2 | 93.7 | 0.1 | -0.49 | 0.77 | 0.77 | 2.10 | 3.6 | 0.006 | 0.67 | 0.0 | 0.05 | 15.11 | 0.00 | 2.116 | 9.11 | 0.41 | 6.8 | 93.1 | 0.1 | -0.71 | 0.36 | 0.80 | 0.81 | 1.93 | 25293 | 3102 | 36 | 0 | 77 | 0 | 0 | logfile |
✔ | 7T3P | 25667 | 2023-04-24 | 2021-12-08 | 3.2 | 3.52 | 3.32 | 3.5 | 0.004 | 0.54 | 0.0 | 0.04 | 13.90 | 0.00 | 2.019 | 8.33 | 0.00 | 4.1 | 95.9 | 0.0 | 1.75 | 0.67 | 0.70 | 2.04 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 16.16 | 0.00 | 2.089 | 11.93 | 0.34 | 3.8 | 96.2 | 0.0 | 1.02 | 1.82 | 0.70 | 0.76 | 2.15 | 66992 | 8188 | 8 | 0 | 88 | 0 | 0 | logfile |
✔ | 7T3Q | 25668 | 2023-04-25 | 2021-12-08 | 3.3 | 3.64 | 3.39 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 13.87 | 0.00 | 2.049 | 7.69 | 0.00 | 4.5 | 95.5 | 0.0 | 1.74 | 0.70 | 0.74 | 2.52 | 3.6 | 0.005 | 0.70 | 0.0 | 0.04 | 16.43 | 0.00 | 2.118 | 12.11 | 0.32 | 4.4 | 95.6 | 0.0 | 0.52 | 0.83 | 0.74 | 0.80 | 2.04 | 68124 | 8336 | 8 | 0 | 88 | 0 | 0 | logfile |
✔ | 6YG8 | 10799 | 2023-04-27 | 2020-03-27 | 3.0 | 3.39 | — | 3.2 | 0.005 | 0.60 | 0.0 | 0.05 | 11.98 | 0.00 | 2.166 | 6.88 | 0.00 | 4.7 | 95.3 | 0.0 | -3.49 | 0.83 | 0.86 | 3.96 | 3.3 | 0.004 | 0.61 | 0.0 | 0.05 | 14.33 | 0.00 | 2.167 | 7.56 | 1.77 | 4.2 | 95.8 | 0.0 | -0.38 | 1.12 | 0.84 | 0.88 | 3.42 | 24330 | 3132 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H6F | 0150 | 2023-04-22 | 2018-07-27 | 3.72 | 2.83 | — | 3.6 | 0.020 | 1.68 | 1.0 | 0.09 | 10.88 | 0.01 | 2.182 | 1.08 | 0.00 | 1.7 | 98.1 | 0.2 | 0.96 | 0.83 | 0.77 | 1.63 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.30 | 0.00 | 2.091 | 11.57 | 0.19 | 2.5 | 97.5 | 0.0 | 1.42 | 0.90 | 0.84 | 0.77 | 1.43 | 114303 | 14388 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DA7 | 30624 | 2023-04-22 | 2020-10-15 | 3.47 | 4.00 | — | 3.8 | 0.007 | 0.97 | 0.0 | 0.07 | 16.87 | 0.01 | 2.072 | 11.32 | 0.00 | 9.7 | 90.2 | 0.1 | -4.59 | 0.80 | 0.80 | 2.80 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 16.85 | 0.00 | 2.160 | 9.63 | 0.16 | 8.6 | 91.4 | 0.0 | -2.00 | 1.07 | 0.80 | 0.83 | 2.45 | 11825 | 1338 | 3 | 90 | 0 | 0 | 0 | logfile |
✔ | 7V7U | 31782 | 2023-04-27 | 2021-08-21 | 3.0 | 3.56 | — | 3.4 | 0.005 | 0.64 | 0.0 | 0.05 | 13.78 | 0.00 | 2.194 | 7.34 | 0.00 | 4.8 | 95.1 | 0.1 | 0.24 | 0.81 | 0.84 | 2.19 | 3.4 | 0.004 | 0.62 | 0.0 | 0.05 | 15.32 | 0.00 | 2.161 | 6.96 | 1.52 | 4.3 | 95.7 | 0.1 | 0.20 | 0.41 | 0.81 | 0.85 | 2.13 | 25283 | 3088 | 41 | 0 | 83 | 0 | 0 | logfile |
✔ | 7K0L | 22601 | 2023-04-20 | 2020-09-04 | 3.4 | 3.83 | — | 3.7 | 0.004 | 0.60 | 0.0 | 0.04 | 12.59 | 0.00 | 2.141 | 4.28 | 0.00 | 1.9 | 98.1 | 0.0 | 1.09 | 0.74 | 0.87 | 3.05 | 3.7 | 0.003 | 0.49 | 0.0 | 0.04 | 13.87 | 0.00 | 2.212 | 5.13 | 0.12 | 2.0 | 98.0 | 0.0 | 1.07 | 1.04 | 0.75 | 0.88 | 2.70 | 7619 | 964 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7T6o | 25721 | 2023-04-25 | 2021-12-14 | 2.6 | 2.80 | — | 2.9 | 0.004 | 0.79 | 0.0 | 0.05 | 14.06 | 0.01 | 2.302 | 2.54 | 0.00 | 1.3 | 98.7 | 0.0 | -1.56 | 0.67 | 0.84 | 3.82 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 16.16 | 0.00 | 2.191 | 6.19 | 1.19 | 1.2 | 98.8 | 0.0 | 1.76 | 0.90 | 0.68 | 0.87 | 3.34 | 19412 | 2424 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VRL | 21370 | 2023-04-20 | 2020-02-07 | 3.8 | 3.98 | 4.22 | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.10 | 0.00 | 2.159 | 10.65 | 0.00 | 4.9 | 95.1 | 0.0 | -3.12 | 0.49 | 0.69 | 1.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6141 | 764 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7EAZ | 31047 | 2023-04-27 | 2021-03-08 | 3.5 | 4.16 | — | 4.0 | 0.004 | 0.67 | 0.0 | 0.05 | 13.84 | 0.00 | 2.146 | 8.23 | 0.00 | 5.3 | 94.7 | 0.0 | -1.15 | 0.79 | 0.77 | 2.17 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.21 | 0.00 | 2.165 | 7.66 | 0.11 | 5.2 | 94.8 | 0.0 | -0.71 | 0.31 | 0.80 | 0.79 | 1.93 | 24956 | 3051 | 38 | 0 | 82 | 0 | 0 | logfile |
✔ | 7V80 | 31785 | 2023-04-20 | 2021-08-22 | 3.9 | 4.10 | — | 4.0 | 0.004 | 0.65 | 0.0 | 0.05 | 15.00 | 0.00 | 2.120 | 8.76 | 0.00 | 6.2 | 93.8 | 0.0 | -0.76 | 0.65 | 0.72 | 1.58 | 4.0 | 0.003 | 0.71 | 0.0 | 0.05 | 16.57 | 0.00 | 2.129 | 11.63 | 0.43 | 6.1 | 93.9 | 0.0 | -0.41 | 1.17 | 0.67 | 0.76 | 1.33 | 6609 | 797 | 7 | 0 | 11 | 0 | 0 | logfile |
✔ | 6W6W | 21567 | 2023-04-23 | 2020-03-17 | 3.0 | 3.23 | — | 3.1 | 0.006 | 0.99 | 1.0 | 0.06 | 14.87 | 0.01 | 2.303 | 2.69 | 0.00 | 12.1 | 87.6 | 0.3 | -5.09 | 0.64 | 0.84 | 3.49 | 3.1 | 0.006 | 0.79 | 0.0 | 0.05 | 16.39 | 0.00 | 2.188 | 8.07 | 1.60 | 11.9 | 87.8 | 0.3 | -2.68 | 1.19 | 0.65 | 0.87 | 3.20 | 10981 | 1388 | 6 | 4 | 1 | 0 | 0 | logfile |
✔ | 7T3R | 25669 | 2023-04-26 | 2021-12-08 | 3.4 | 3.68 | 3.48 | 3.6 | 0.004 | 0.54 | 0.0 | 0.04 | 13.70 | 0.00 | 2.035 | 8.37 | 0.00 | 4.7 | 95.3 | 0.0 | 1.52 | 0.71 | 0.78 | 2.05 | 3.6 | 0.004 | 0.65 | 0.0 | 0.04 | 16.69 | 0.00 | 2.093 | 11.56 | 0.30 | 4.4 | 95.6 | 0.0 | 0.90 | 1.38 | 0.75 | 0.86 | 1.84 | 68780 | 8444 | 8 | 0 | 88 | 0 | 0 | logfile |
✔ | 7PW7 | 13677 | 2023-04-23 | 2021-10-06 | 3.59 | 3.77 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.17 | 13.25 | 0.00 | 2.020 | 5.39 | 0.00 | 2.9 | 97.1 | 0.0 | 1.95 | 0.76 | 0.76 | 0.92 | 3.6 | 0.003 | 0.53 | 0.0 | 0.04 | 14.58 | 0.00 | 1.905 | 5.91 | 0.21 | 3.8 | 96.2 | 0.0 | 1.86 | 0.94 | 0.78 | 0.79 | 1.11 | 16227 | 2056 | 4 | 0 | 199 | 0 | 0 | logfile |
✔ | 7V76 | 31760 | 2023-04-27 | 2021-08-21 | 3.2 | 3.71 | — | 3.6 | 0.004 | 0.58 | 0.0 | 0.05 | 13.70 | 0.00 | 2.164 | 6.14 | 0.00 | 4.5 | 95.5 | 0.0 | 0.02 | 0.78 | 0.80 | 2.16 | 3.6 | 0.004 | 0.59 | 0.0 | 0.05 | 15.16 | 0.00 | 2.082 | 6.48 | 0.22 | 5.1 | 94.9 | 0.1 | -0.10 | 0.34 | 0.80 | 0.84 | 2.03 | 25219 | 3088 | 37 | 0 | 77 | 0 | 0 | logfile |
✔ | 7V78 | 31762 | 2023-04-27 | 2021-08-21 | 3.4 | 3.85 | — | 3.7 | 0.005 | 0.63 | 0.0 | 0.05 | 13.65 | 0.00 | 2.142 | 6.37 | 0.00 | 5.4 | 94.5 | 0.1 | -0.20 | 0.74 | 0.77 | 2.64 | 3.7 | 0.008 | 0.73 | 0.0 | 0.05 | 15.13 | 0.00 | 2.107 | 7.37 | 0.44 | 6.4 | 93.5 | 0.1 | -0.70 | 0.36 | 0.79 | 0.84 | 2.48 | 25677 | 3123 | 41 | 0 | 90 | 0 | 0 | logfile |
✔ | 6VRH | 21368 | 2023-04-20 | 2020-02-07 | 3.3 | 3.68 | 3.56 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 12.99 | 0.00 | 2.212 | 9.91 | 0.00 | 5.1 | 94.9 | 0.0 | -3.01 | 0.45 | 0.70 | 2.12 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 15.00 | 0.00 | 2.158 | 9.18 | 0.00 | 5.3 | 94.7 | 0.0 | -0.60 | 0.58 | 0.48 | 0.73 | 1.90 | 6142 | 764 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7Li8 | 23363 | 2023-04-20 | 2021-01-26 | 3.9 | 4.37 | — | 4.3 | 0.002 | 0.60 | 0.0 | 0.04 | 10.78 | 0.00 | 2.230 | 6.92 | 0.00 | 5.3 | 94.7 | 0.0 | -3.23 | 0.62 | 0.72 | 1.26 | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.55 | 0.00 | 2.204 | 9.66 | 0.78 | 7.8 | 92.2 | 0.0 | -1.32 | 2.53 | 0.68 | 0.76 | 1.58 | 6181 | 767 | 5 | 0 | 14 | 0 | 0 | logfile |