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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8GNi | 34165 | 2023-07-04 | 2022-08-24 | 3.74 | 3.26 | 3.54 | 3.5 | 0.007 | 1.04 | 0.0 | 0.06 | 14.15 | 0.01 | 1.977 | 10.24 | 0.00 | 5.7 | 94.3 | 0.0 | -3.32 | 0.66 | 0.75 | 1.56 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 16.60 | 0.00 | 2.204 | 13.74 | 0.48 | 4.2 | 95.8 | 0.0 | -0.53 | 0.68 | 0.66 | 0.75 | 1.55 | 5832 | 746 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6T8B | 10399 | 2023-07-09 | 2019-10-24 | 3.65 | 3.73 | — | 3.7 | 0.004 | 0.72 | 0.0 | 0.05 | 12.10 | 0.01 | 1.942 | 14.10 | 0.00 | 7.2 | 92.8 | 0.0 | -4.40 | 0.76 | 0.83 | 2.47 | 3.7 | 0.004 | 0.71 | 0.0 | 0.05 | 16.55 | 0.00 | 1.868 | 13.84 | 0.40 | 6.0 | 94.0 | 0.0 | -1.41 | 0.71 | 0.79 | 0.84 | 1.76 | 19077 | 2370 | 14 | 40 | 10 | 0 | 0 | logfile |
✔ | 8FA2 | 28948 | 2023-07-03 | 2022-11-25 | 2.82 | 2.48 | 3.15 | 2.1 | 0.006 | 0.55 | 0.0 | 0.04 | 13.54 | 0.00 | 2.297 | 6.56 | 0.00 | 1.8 | 98.2 | 0.0 | -0.12 | 0.76 | 0.79 | 0.72 | 2.0 | 0.003 | 0.45 | 0.0 | 0.04 | 14.46 | 0.00 | 2.218 | 8.87 | 0.67 | 0.0 | 100.0 | 0.0 | 5.30 | 0.38 | 0.76 | 0.79 | 0.78 | 2577 | 342 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WWV | 32874 | 2023-07-10 | 2022-02-14 | 3.2 | 3.31 | — | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 15.91 | 0.00 | 2.204 | 6.39 | 0.00 | 8.4 | 91.3 | 0.2 | -0.65 | 0.74 | 0.80 | 2.46 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 17.78 | 0.00 | 2.064 | 7.43 | 0.33 | 8.8 | 90.9 | 0.2 | -0.73 | 1.46 | 0.75 | 0.83 | 2.40 | 19622 | 2233 | 11 | 117 | 0 | 0 | 0 | logfile |
✔ | 7NSB | 12563 | 2023-07-07 | 2021-03-05 | 3.7 | 3.60 | 3.62 | 3.7 | 0.004 | 0.70 | 0.0 | 0.05 | 13.75 | 0.00 | 2.214 | 8.33 | 0.00 | 11.5 | 88.5 | 0.0 | -2.03 | 0.73 | 0.82 | 2.57 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 15.38 | 0.00 | 2.139 | 7.84 | 0.37 | 10.4 | 89.6 | 0.0 | -1.04 | 0.31 | 0.73 | 0.82 | 1.63 | 13474 | 1775 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PA7 | 20281 | 2023-07-10 | 2019-06-11 | 2.94 | 3.31 | — | 3.1 | 0.005 | 0.80 | 0.0 | 0.05 | 23.57 | 0.01 | 2.304 | 3.72 | 0.00 | 3.1 | 96.9 | 0.0 | -2.99 | 0.80 | 0.77 | 2.57 | 3.1 | 0.003 | 0.65 | 0.0 | 0.04 | 25.89 | 0.00 | 2.170 | 12.57 | 2.87 | 3.6 | 96.4 | 0.0 | 0.76 | 0.85 | 0.82 | 0.83 | 2.55 | 21019 | 1770 | 19 | 332 | 3 | 0 | 0 | logfile |
✔ | 8EG0 | 28108 | 2023-07-04 | 2022-09-10 | 3.53 | 4.58 | 3.65 | 4.0 | 0.002 | 0.49 | 0.0 | 0.04 | 11.73 | 0.00 | 2.269 | 7.87 | 0.00 | 0.5 | 99.5 | 0.0 | 1.82 | 0.89 | 0.83 | 1.71 | 4.1 | 0.004 | 0.55 | 0.0 | 0.04 | 13.47 | 0.00 | 2.195 | 11.32 | 0.00 | 2.3 | 97.7 | 0.0 | 1.60 | 0.57 | 0.90 | 0.85 | 1.98 | 6031 | 584 | 4 | 65 | 0 | 0 | 0 | logfile |
✔ | 7Z2D | 14462 | 2023-07-04 | 2022-02-26 | 3.38 | 3.18 | 3.47 | 3.3 | 0.006 | 0.65 | 0.0 | 0.04 | 16.33 | 0.02 | 2.187 | 7.33 | 0.00 | 3.9 | 96.1 | 0.0 | -0.02 | 0.60 | 0.69 | 2.73 | 3.3 | 0.004 | 0.71 | 0.0 | 0.04 | 17.94 | 0.01 | 2.231 | 10.11 | 0.23 | 5.3 | 94.7 | 0.0 | -0.40 | 0.38 | 0.60 | 0.73 | 2.54 | 8591 | 959 | 4 | 36 | 1 | 0 | 0 | logfile |
✔ | 7R6L | 24281 | 2023-07-04 | 2021-06-22 | 2.85 | 3.04 | — | 3.0 | 0.008 | 0.89 | 0.0 | 0.05 | 16.80 | 0.01 | 1.985 | 4.24 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.67 | 0.86 | — | 3.0 | 0.006 | 0.73 | 0.0 | 0.04 | 16.40 | 0.01 | 1.882 | 7.54 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.09 | 0.62 | 0.86 | — | 7857 | 0 | 3 | 366 | 20 | 0 | 0 | logfile |
✘ | 7XL4 | 33272 | 2023-07-11 | 2022-04-21 | 3.86 | 3.92 | — | 3.8 | 0.001 | 0.36 | 0.0 | 0.04 | 9.42 | 0.00 | 2.274 | 4.13 | 0.00 | 1.4 | 98.6 | 0.0 | -4.82 | 0.78 | 0.75 | 1.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24560 | 3479 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7E3B | 30978 | 2023-07-03 | 2021-02-08 | 4.2 | 4.05 | — | 4.0 | 0.006 | 0.81 | 0.0 | 0.05 | 13.28 | 0.00 | 2.241 | 16.63 | 0.00 | 8.2 | 91.8 | 0.0 | -2.04 | 0.74 | 0.84 | — | 4.0 | 0.003 | 0.70 | 0.0 | 0.05 | 13.19 | 0.00 | 2.247 | 15.70 | 0.00 | 5.8 | 94.2 | 0.0 | -1.19 | 0.41 | 0.74 | 0.83 | — | 3299 | 421 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VXi | 32180 | 2023-07-11 | 2021-11-12 | 3.4 | 2.35 | — | 2.0 | 0.002 | 0.49 | 0.0 | 0.04 | 7.29 | 0.00 | 2.125 | 3.01 | 0.00 | 4.3 | 95.5 | 0.1 | -1.83 | 0.65 | 0.60 | 1.83 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 13.57 | 0.00 | 2.129 | 9.76 | 0.33 | 3.3 | 96.5 | 0.2 | 0.10 | 1.42 | 0.71 | 0.69 | 2.31 | 24570 | 3144 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PLZ | 20381 | 2023-07-07 | 2019-07-01 | 3.0 | 3.68 | — | 3.5 | 0.006 | 0.97 | 0.0 | 0.06 | 8.93 | 0.01 | 2.338 | 4.40 | 0.00 | 5.3 | 94.7 | 0.0 | -5.25 | 0.60 | 0.85 | 4.29 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.36 | 0.00 | 2.102 | 9.19 | 2.85 | 3.1 | 96.9 | 0.0 | -0.67 | 0.70 | 0.56 | 0.84 | 3.32 | 14210 | 1725 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 5V7Q | 8641 | 2023-07-16 | 2017-03-20 | 3.7 | 3.74 | — | 3.7 | 0.007 | 0.90 | 0.0 | 0.05 | 11.17 | 0.01 | 2.022 | 3.00 | 0.00 | 10.2 | 89.2 | 0.6 | -2.24 | 0.78 | 0.76 | 1.68 | 3.7 | 0.007 | 0.79 | 0.0 | 0.04 | 15.03 | 0.01 | 1.963 | 17.22 | 1.35 | 11.9 | 88.0 | 0.1 | -2.33 | 1.59 | 0.81 | 0.81 | 1.32 | 94306 | 3216 | 32 | 3233 | 1 | 0 | 0 | logfile |
✘ | 8GNJ | 34166 | 2023-07-04 | 2022-08-24 | 3.78 | 3.60 | 3.67 | 3.6 | 0.012 | 1.34 | 0.0 | 0.07 | 15.38 | 0.01 | 1.811 | 12.03 | 0.00 | 4.6 | 95.4 | 0.0 | -3.73 | 0.66 | 0.81 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5832 | 746 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7R15 | 14231 | 2023-07-11 | 2022-02-02 | 4.1 | 4.52 | 4.27 | 4.3 | 0.004 | 0.57 | 0.0 | 0.05 | 13.87 | 0.00 | 2.099 | 11.10 | 0.00 | 6.2 | 93.8 | 0.0 | -0.90 | 0.86 | 0.84 | — | 4.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.11 | 0.00 | 2.136 | 11.06 | 0.04 | 5.1 | 94.9 | 0.0 | -0.86 | 0.36 | 0.85 | 0.83 | — | 24100 | 3000 | 9 | 0 | 43 | 0 | 0 | logfile |
✔ | 7WB1 | 32392 | 2023-07-06 | 2021-12-15 | 3.7 | 3.09 | — | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 19.51 | 0.00 | 2.046 | 11.12 | 0.00 | 4.7 | 95.2 | 0.1 | 0.55 | 0.83 | 0.75 | 0.94 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 20.37 | 0.00 | 2.084 | 14.67 | 0.00 | 5.2 | 94.8 | 0.0 | 0.33 | 1.01 | 0.83 | 0.76 | 1.29 | 11524 | 960 | 4 | 178 | 0 | 0 | 0 | logfile |
✔ | 6RLB | 4918 | 2023-07-10 | 2019-05-01 | 4.5 | 4.85 | 4.49 | 4.3 | 0.007 | 0.95 | 0.0 | 0.06 | 4.70 | 0.00 | 2.082 | 0.71 | 0.00 | 4.0 | 95.9 | 0.0 | -1.08 | 0.80 | 0.63 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 5.23 | 0.00 | 2.224 | 3.54 | 0.00 | 11.8 | 88.1 | 0.0 | -0.71 | 1.83 | 0.86 | 0.66 | — | 20407 | 4122 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T7A | 10391 | 2023-07-05 | 2019-10-21 | 3.7 | 4.20 | 3.60 | 3.7 | 0.006 | 0.87 | 0.0 | 0.05 | 25.96 | 0.01 | 0.733 | 6.61 | 0.00 | 1.8 | 98.1 | 0.1 | -3.03 | 0.85 | 0.81 | 1.66 | 3.7 | 0.005 | 0.76 | 0.0 | 0.04 | 26.57 | 0.00 | 2.152 | 16.37 | 1.40 | 2.5 | 97.5 | 0.0 | 2.32 | 1.74 | 0.87 | 0.85 | 1.25 | 10338 | 847 | 11 | 190 | 0 | 0 | 0 | logfile |
✔ | 7RAN | 24378 | 2023-07-04 | 2021-07-02 | 3.45 | 3.40 | — | 3.5 | 0.005 | 0.70 | 0.0 | 0.05 | 12.51 | 0.00 | 2.091 | 5.14 | 0.00 | 3.0 | 97.0 | 0.0 | 0.61 | 0.75 | 0.81 | 2.69 | 3.5 | 0.003 | 0.56 | 0.0 | 0.04 | 14.79 | 0.00 | 2.095 | 4.96 | 0.11 | 2.8 | 97.2 | 0.0 | 0.67 | 0.36 | 0.76 | 0.84 | 2.18 | 8523 | 1120 | 6 | 0 | 1 | 0 | 0 | logfile |