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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 5Lii | 4053 | 2024-03-10 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MUo | 9250 | 2024-03-16 | 2018-10-23 | 3.6 | 4.56 | — | 4.5 | 0.008 | 0.95 | 0.0 | 0.05 | 26.21 | 0.01 | 2.077 | 6.89 | 0.48 | 7.8 | 92.2 | 0.0 | -6.10 | 0.64 | 0.68 | 1.87 | 4.5 | 0.004 | 0.67 | 0.0 | 0.04 | 27.19 | 0.00 | 2.140 | 11.31 | 3.25 | 6.8 | 93.2 | 0.0 | -1.32 | 0.78 | 0.68 | 0.75 | 0.66 | 14015 | 1006 | 13 | 294 | 0 | 0 | 0 | logfile |
✔ | 7M65 | 23689 | 2024-03-10 | 2021-03-25 | 4.1 | 4.11 | — | 4.3 | 0.009 | 1.40 | 0.0 | 0.10 | 12.05 | 0.00 | 2.392 | 33.63 | 0.00 | 17.6 | 82.4 | 0.0 | -6.09 | 0.52 | 0.73 | — | 4.2 | 0.004 | 0.86 | 0.0 | 0.04 | 11.57 | 0.00 | 2.259 | 19.62 | 0.00 | 15.7 | 84.3 | 0.0 | -6.09 | 4.55 | 0.51 | 0.72 | — | 2025 | 275 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7RAS | 24385 | 2024-03-18 | 2021-07-02 | 3.64 | 4.18 | — | 4.1 | 0.010 | 1.33 | 0.0 | 0.05 | 11.93 | 0.01 | 2.283 | 4.29 | 1.11 | 6.3 | 93.2 | 0.5 | -6.09 | 0.67 | 0.82 | 2.35 | 4.1 | 0.002 | 0.70 | 0.0 | 0.04 | 15.15 | 0.00 | 2.187 | 10.54 | 1.30 | 4.4 | 95.5 | 0.1 | -0.44 | 0.80 | 0.68 | 0.82 | 1.53 | 20000 | 2440 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6QM9 | 4592 | 2024-03-15 | 2019-02-01 | 3.6 | 3.72 | 3.65 | 3.7 | 0.005 | 0.89 | 0.0 | 0.05 | 15.52 | 0.01 | 2.275 | 3.74 | 0.00 | 3.2 | 96.8 | 0.0 | -6.09 | 0.74 | 0.84 | 2.64 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 16.85 | 0.00 | 2.168 | 8.08 | 2.94 | 3.2 | 96.8 | 0.0 | 0.65 | 0.56 | 0.74 | 0.84 | 1.64 | 10878 | 1346 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6QQ5 | 4618 | 2024-03-15 | 2019-02-17 | 3.9 | 3.85 | — | 3.8 | 0.007 | 1.07 | 0.0 | 0.06 | 14.96 | 0.01 | 1.792 | 4.98 | 0.00 | 8.7 | 91.3 | 0.0 | -6.09 | 0.71 | 0.84 | 3.00 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 16.33 | 0.00 | 2.075 | 7.45 | 2.07 | 6.6 | 93.4 | 0.0 | -1.84 | 0.43 | 0.73 | 0.83 | 2.23 | 11829 | 1476 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 7K4B | 22663 | 2024-03-18 | 2020-09-15 | 3.1 | 3.39 | — | 3.4 | 0.013 | 1.53 | 0.0 | 0.07 | 17.36 | 0.01 | 2.287 | 4.75 | 0.95 | 8.9 | 91.0 | 0.1 | -6.09 | 0.56 | 0.82 | 3.72 | 3.4 | 0.002 | 0.63 | 0.0 | 0.04 | 16.30 | 0.00 | 2.300 | 8.59 | 2.84 | 6.6 | 93.4 | 0.0 | -0.70 | 0.58 | 0.61 | 0.86 | 2.29 | 21118 | 2428 | 8 | 0 | 62 | 0 | 0 | logfile |
✔ | 6SJ6 | 10212 | 2024-03-17 | 2019-08-12 | 3.23 | 3.28 | — | 3.2 | 0.010 | 1.05 | 0.0 | 0.06 | 23.89 | 0.01 | 1.886 | 4.33 | 0.14 | 17.7 | 82.2 | 0.2 | -6.09 | 0.78 | 0.78 | 3.43 | 3.2 | 0.005 | 0.77 | 0.0 | 0.04 | 23.53 | 0.01 | 1.849 | 8.52 | 4.64 | 13.2 | 86.8 | 0.0 | -3.89 | 2.00 | 0.80 | 0.80 | 2.38 | 78296 | 2611 | 27 | 2697 | 59 | 0 | 0 | logfile |
✔ | 7VQQ | 32092 | 2024-03-10 | 2021-10-20 | 2.9 | 2.61 | — | 3.1 | 0.009 | 0.85 | 0.0 | 0.05 | 11.51 | 0.01 | 2.233 | 2.50 | 0.00 | 12.4 | 87.6 | 0.0 | -6.09 | 0.47 | 0.86 | 4.62 | 3.1 | 0.003 | 0.68 | 0.0 | 0.04 | 12.39 | 0.00 | 2.279 | 2.21 | 1.83 | 3.4 | 96.6 | 0.0 | -4.88 | 0.27 | 0.47 | 0.87 | 4.65 | 1968 | 273 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oFG | 20045 | 2024-03-15 | 2019-03-29 | 2.9 | 3.01 | — | 3.0 | 0.008 | 0.75 | 0.0 | 0.04 | 10.04 | 0.01 | 2.263 | 5.31 | 0.00 | 3.9 | 96.1 | 0.0 | -6.09 | 0.65 | 0.85 | 4.64 | 3.0 | 0.002 | 0.52 | 0.0 | 0.03 | 14.16 | 0.00 | 2.133 | 7.52 | 4.02 | 3.4 | 96.6 | 0.0 | 5.02 | 0.52 | 0.66 | 0.87 | 3.09 | 10980 | 1404 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oY3 | 20221 | 2024-03-14 | 2019-05-14 | 4.0 | 4.14 | — | 4.1 | 0.009 | 1.10 | 0.0 | 0.06 | 15.73 | 0.01 | 2.285 | 9.49 | 0.40 | 6.9 | 92.9 | 0.2 | -6.09 | 0.68 | 0.81 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 17.16 | 0.00 | 2.248 | 8.12 | 3.71 | 3.6 | 96.3 | 0.1 | -1.75 | 0.49 | 0.69 | 0.80 | — | 9534 | 1188 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7FDV | 31547 | 2024-03-11 | 2021-07-18 | 3.26 | 3.55 | — | 3.6 | 0.007 | 1.12 | 2.0 | 0.06 | 15.44 | 0.00 | 2.001 | 12.40 | 0.66 | 9.2 | 90.8 | 0.0 | -6.08 | 0.70 | 0.82 | 2.52 | 3.6 | 0.004 | 0.72 | 0.0 | 0.04 | 15.65 | 0.00 | 2.230 | 6.67 | 2.86 | 5.6 | 94.4 | 0.0 | -3.05 | 0.44 | 0.69 | 0.83 | 1.71 | 8508 | 1058 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7WiH | 32530 | 2024-03-14 | 2022-01-03 | 3.68 | 4.13 | — | 4.1 | 0.006 | 1.03 | 0.0 | 0.06 | 14.90 | 0.01 | 2.318 | 5.51 | 0.73 | 10.8 | 88.9 | 0.3 | -6.08 | 0.77 | 0.78 | 2.12 | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 14.60 | 0.00 | 2.140 | 8.37 | 4.27 | 10.8 | 89.1 | 0.1 | -3.33 | 0.46 | 0.75 | 0.76 | 1.78 | 10002 | 1482 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6N24 | 9322 | 2024-03-15 | 2018-11-12 | 3.0 | 3.88 | — | 3.7 | 0.007 | 0.78 | 0.0 | 0.05 | 9.04 | 0.01 | 2.332 | 3.60 | 0.29 | 3.6 | 96.4 | 0.0 | -6.07 | 0.73 | 0.84 | 3.71 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 13.80 | 0.00 | 2.128 | 6.81 | 1.58 | 1.7 | 98.3 | 0.0 | 0.36 | 2.29 | 0.63 | 0.73 | 2.82 | 12643 | 1530 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MiN | 23857 | 2024-03-19 | 2021-04-17 | 3.09 | 3.25 | — | 3.2 | 0.011 | 1.46 | 0.0 | 0.05 | 20.42 | 0.01 | 2.303 | 4.34 | 0.18 | 4.6 | 95.3 | 0.2 | -6.07 | 0.75 | 0.89 | 4.45 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 16.84 | 0.00 | 2.123 | 5.00 | 0.92 | 3.6 | 96.4 | 0.0 | 0.71 | 0.66 | 0.73 | 0.89 | 2.99 | 22728 | 2560 | 8 | 0 | 40 | 0 | 0 | logfile |
✔ | 6L1U | 0803 | 2024-03-15 | 2019-09-30 | 3.37 | 3.54 | — | 3.5 | 0.011 | 0.90 | 0.0 | 0.06 | 15.32 | 0.00 | 2.138 | 15.24 | 0.00 | 15.8 | 84.2 | 0.0 | -6.06 | 0.47 | 0.83 | 2.58 | 3.5 | 0.005 | 0.69 | 0.0 | 0.05 | 16.59 | 0.00 | 2.178 | 12.73 | 8.92 | 15.8 | 84.2 | 0.0 | -5.02 | 2.68 | 0.47 | 0.85 | 2.92 | 10515 | 1500 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ASK | 11895 | 2024-03-15 | 2020-10-27 | 4.3 | 4.39 | — | 4.3 | 0.028 | 2.99 | 47.0 | 0.22 | 18.83 | 0.02 | 0.766 | 14.21 | 2.58 | 16.8 | 73.5 | 9.7 | -6.06 | 0.17 | 0.51 | — | 4.3 | 0.015 | 1.13 | 2.0 | 0.05 | 15.40 | 0.01 | 2.076 | 16.90 | 0.00 | 18.4 | 80.1 | 1.5 | -3.44 | 1.30 | 0.18 | 0.61 | — | 12285 | 1523 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6X3E | 22020 | 2024-03-14 | 2020-05-21 | 3.42 | 3.51 | — | 3.5 | 0.006 | 0.90 | 0.0 | 0.06 | 14.42 | 0.01 | 2.083 | 3.23 | 0.00 | 2.9 | 97.1 | 0.0 | -6.06 | 0.60 | 0.87 | 2.34 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 16.03 | 0.00 | 2.184 | 7.48 | 2.68 | 2.5 | 97.5 | 0.0 | 1.02 | 1.05 | 0.62 | 0.89 | 1.51 | 9469 | 1242 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7V5C | 31722 | 2024-03-14 | 2021-08-17 | 3.2 | 3.83 | — | 3.7 | 0.009 | 0.63 | 0.0 | 0.04 | 13.83 | 0.00 | 1.766 | 28.98 | 0.00 | 6.7 | 93.3 | 0.0 | -6.06 | 0.66 | 0.86 | 2.72 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.99 | 0.00 | 1.875 | 5.18 | 3.83 | 3.6 | 96.4 | 0.0 | -0.86 | 0.95 | 0.65 | 0.86 | 2.46 | 8916 | 1144 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6P48 | 20246 | 2024-03-14 | 2019-05-26 | 3.2 | 3.42 | 2.96 | 3.5 | 0.011 | 1.56 | 2.0 | 0.09 | 16.57 | 0.01 | 2.014 | 22.33 | 3.53 | 6.5 | 92.6 | 0.9 | -6.05 | 0.59 | 0.65 | 1.57 | 3.5 | 0.004 | 0.82 | 0.0 | 0.04 | 17.21 | 0.01 | 2.211 | 17.81 | 4.37 | 9.9 | 89.9 | 0.2 | -2.11 | 0.75 | 0.61 | 0.67 | 1.68 | 9936 | 1208 | 4 | 0 | 2 | 0 | 0 | logfile |